RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 CRIPTQ9P021 101 aa9.51□□□□□ -0.89
PTPN4-202ENST00000420482 MUC12Q9UKN1 5478 aa9.49□□□□□ -0.89
PTPN4-202ENST00000420482 ATOX1O00244 68 aa9.48□□□□□ -0.89
PTPN4-202ENST00000420482 UQCRQO14949 82 aa9.47□□□□□ -0.89
PTPN4-202ENST00000420482 HIST1H4AP62805 103 aaKnown RBP9.47□□□□□ -0.89
PTPN4-202ENST00000420482 IMUPQ9GZP8 106 aa9.47□□□□□ -0.89
PTPN4-202ENST00000420482 FAM240AA0A1B0GVK7 77 aa9.46□□□□□ -0.9
PTPN4-202ENST00000420482 NDUFC1O43677 76 aa9.43□□□□□ -0.9
PTPN4-202ENST00000420482 H0Y9P7 68 aa9.42□□□□□ -0.9
PTPN4-202ENST00000420482 KRTAP10-5P60370 271 aa9.42□□□□□ -0.9
PTPN4-202ENST00000420482 A0A087WVE0 104 aa9.4□□□□□ -0.9
PTPN4-202ENST00000420482 A8MUN3 132 aa9.35□□□□□ -0.91
PTPN4-202ENST00000420482 H0YAA0 97 aa9.35□□□□□ -0.91
PTPN4-202ENST00000420482 KRTAP20-1Q3LI63 56 aa9.33□□□□□ -0.92
PTPN4-202ENST00000420482 KRTAP5-9P26371 169 aa9.28□□□□□ -0.92
PTPN4-202ENST00000420482 LINC00643Q86TS7 51 aa9.28□□□□□ -0.92
PTPN4-202ENST00000420482 LINC00208Q96KT6 92 aa9.26□□□□□ -0.93
PTPN4-202ENST00000420482 MP68P56378 58 aa9.25□□□□□ -0.93
PTPN4-202ENST00000420482 ADM2Q7Z4H4 148 aa9.21□□□□□ -0.94
PTPN4-202ENST00000420482 KMT2DO14686 5537 aa9.21□□□□□ -0.94
PTPN4-202ENST00000420482 MDN1Q9NU22 5596 aa9.2□□□□□ -0.94
PTPN4-202ENST00000420482 PRO2289Q9P1D8 64 aa9.15□□□□□ -0.94
PTPN4-202ENST00000420482 OCR1Q9BZK8 76 aa9.13□□□□□ -0.95
PTPN4-202ENST00000420482 C20orf197Q8N268 126 aa9.1□□□□□ -0.95
PTPN4-202ENST00000420482 PLAC4Q8WY50 150 aa9.09□□□□□ -0.95
PTPN4-202ENST00000420482 H3BPC8 53 aa9.08□□□□□ -0.96
PTPN4-202ENST00000420482 R4GN34 69 aa9.06□□□□□ -0.96
PTPN4-202ENST00000420482 J3QR89 54 aa9.01□□□□□ -0.97
PTPN4-202ENST00000420482 SCGB1A1P11684 91 aa9□□□□□ -0.97
PTPN4-202ENST00000420482 KRTAP2-3P0C7H8 128 aa8.98□□□□□ -0.97
PTPN4-202ENST00000420482 KRTAP2-4Q9BYR9 128 aa8.98□□□□□ -0.97
PTPN4-202ENST00000420482 DMAC1Q96GE9 116 aa8.97□□□□□ -0.97
PTPN4-202ENST00000420482 M0QZ58 72 aa8.95□□□□□ -0.98
PTPN4-202ENST00000420482 A0A1B0GV90 55 aa8.94□□□□□ -0.98
PTPN4-202ENST00000420482 MT1XP80297 61 aa8.93□□□□□ -0.98
PTPN4-202ENST00000420482 P0C880 135 aa8.92□□□□□ -0.98
PTPN4-202ENST00000420482 SPRR2FQ96RM1 72 aa8.89□□□□□ -0.99
PTPN4-202ENST00000420482 KRTAP3-2Q9BYR7 98 aa8.88□□□□□ -0.99
PTPN4-202ENST00000420482 SPRR2EP22531 72 aa8.84□□□□□ -0.99
PTPN4-202ENST00000420482 SPRR2BP35325 72 aa8.84□□□□□ -0.99
PTPN4-202ENST00000420482 SPRR2AP35326 72 aa8.84□□□□□ -0.99
PTPN4-202ENST00000420482 TRAV7A0A075B6U4 112 aa8.83□□□□□ -1
PTPN4-202ENST00000420482 KRTAP8-1Q8IUC2 63 aa8.83□□□□□ -1
PTPN4-202ENST00000420482 LINC01554Q52M75 96 aa8.82□□□□□ -1
PTPN4-202ENST00000420482 KRTAP12-2P59991 146 aa8.81□□□□□ -1
PTPN4-202ENST00000420482 ACYP2P14621 99 aa8.79□□□□□ -1
PTPN4-202ENST00000420482 SPTSSBQ8NFR3 76 aa8.79□□□□□ -1
PTPN4-202ENST00000420482 SMIM20Q8N5G0 67 aa8.72□□□□□ -1.01
PTPN4-202ENST00000420482 MT-ATP8P03928 68 aa8.69□□□□□ -1.02
PTPN4-202ENST00000420482 LCE1AQ5T7P2 110 aa8.68□□□□□ -1.02
PTPN4-202ENST00000420482 KRTAP2-2Q9BYT5 123 aa8.67□□□□□ -1.02
PTPN4-202ENST00000420482 KRTAP2-1Q9BYU5 128 aa8.67□□□□□ -1.02
PTPN4-202ENST00000420482 CHKB-CPT1BH3BT56 60 aa8.65□□□□□ -1.02
PTPN4-202ENST00000420482 KRTAP4-8A0A0G2JLE6 195 aa8.57□□□□□ -1.04
PTPN4-202ENST00000420482 KRTAP4-8Q9BYQ9 185 aa8.57□□□□□ -1.04
PTPN4-202ENST00000420482 K7ERU9 68 aa8.55□□□□□ -1.04
PTPN4-202ENST00000420482 SPRR2DP22532 72 aa8.54□□□□□ -1.04
PTPN4-202ENST00000420482 KRTAP10-7P60409 375 aaPredicted RBP8.51□□□□□ -1.05
PTPN4-202ENST00000420482 KRTAP10-12P60413 245 aa8.51□□□□□ -1.05
PTPN4-202ENST00000420482 SNURFQ9Y675 71 aa8.45□□□□□ -1.06
PTPN4-202ENST00000420482 SPANXA2-OT1Q8N9U9 137 aa8.43□□□□□ -1.06
PTPN4-202ENST00000420482 LCE3BQ5TA77 95 aa8.35□□□□□ -1.07
PTPN4-202ENST00000420482 CAMK2N1Q7Z7J9 78 aa8.33□□□□□ -1.08
PTPN4-202ENST00000420482 SERP2Q8N6R1 65 aa8.3□□□□□ -1.08
PTPN4-202ENST00000420482 SEC61GP60059 68 aa8.23□□□□□ -1.09
PTPN4-202ENST00000420482 KRTAP13-4Q3LI77 160 aa8.23□□□□□ -1.09
PTPN4-202ENST00000420482 SERP1Q9Y6X1 66 aa8.19□□□□□ -1.1
PTPN4-202ENST00000420482 COA5Q86WW8 74 aa8.17□□□□□ -1.1
PTPN4-202ENST00000420482 GPR98Q8WXG9 6306 aa8.08□□□□□ -1.12
PTPN4-202ENST00000420482 A0A0D9SG42 100 aa8.06□□□□□ -1.12
PTPN4-202ENST00000420482 DSTQ03001 7570 aaKnown RBP8□□□□□ -1.13
PTPN4-202ENST00000420482 A0A1B0GU33 70 aa8□□□□□ -1.13
PTPN4-202ENST00000420482 SPINT4Q6UDR6 99 aa8□□□□□ -1.13
PTPN4-202ENST00000420482 SPATA8Q6RVD6 105 aa7.99□□□□□ -1.13
PTPN4-202ENST00000420482 COX7CP15954 63 aa7.98□□□□□ -1.13
PTPN4-202ENST00000420482 KRTAP19-7Q3SYF9 63 aa7.97□□□□□ -1.13
PTPN4-202ENST00000420482 LCE5AQ5TCM9 118 aa7.95□□□□□ -1.14
PTPN4-202ENST00000420482 MT1EP04732 61 aa7.94□□□□□ -1.14
PTPN4-202ENST00000420482 KRTAP19-3Q7Z4W3 81 aa7.93□□□□□ -1.14
PTPN4-202ENST00000420482 H7BZZ5 65 aa7.87□□□□□ -1.15
PTPN4-202ENST00000420482 KRTAP12-1P59990 96 aa7.86□□□□□ -1.15
PTPN4-202ENST00000420482 KRTAP4-9Q9BYQ8 210 aa7.85□□□□□ -1.15
PTPN4-202ENST00000420482 SMIM26A0A096LP01 95 aa7.83□□□□□ -1.16
PTPN4-202ENST00000420482 A0A1B0GU69 56 aa7.82□□□□□ -1.16
PTPN4-202ENST00000420482 CYSTM1Q9H1C7 97 aa7.78□□□□□ -1.16
PTPN4-202ENST00000420482 MT1GP13640 62 aa7.77□□□□□ -1.17
PTPN4-202ENST00000420482 KRTAP19-5Q3LI72 72 aa7.77□□□□□ -1.17
PTPN4-202ENST00000420482 PP632Q6XCG6 107 aa7.77□□□□□ -1.17
PTPN4-202ENST00000420482 LCE1DQ5T752 114 aa7.66□□□□□ -1.18
PTPN4-202ENST00000420482 A8MU10 97 aa7.64□□□□□ -1.19
PTPN4-202ENST00000420482 TNP1P09430 55 aa7.63□□□□□ -1.19
PTPN4-202ENST00000420482 ANAPC13Q9BS18 74 aa7.63□□□□□ -1.19
PTPN4-202ENST00000420482 PRR15LQ9BU68 103 aa7.61□□□□□ -1.19
PTPN4-202ENST00000420482 MT1MQ8N339 61 aa7.57□□□□□ -1.2
PTPN4-202ENST00000420482 HMCN1Q96RW7 5635 aa7.57□□□□□ -1.2
PTPN4-202ENST00000420482 MT1LQ93083 61 aa7.56□□□□□ -1.2
PTPN4-202ENST00000420482 LCE4AQ5TA78 99 aa7.55□□□□□ -1.2
PTPN4-202ENST00000420482 LCE3AQ5TA76 89 aa7.53□□□□□ -1.2
PTPN4-202ENST00000420482 C10orf95Q9H7T3 257 aa7.53□□□□□ -1.2
PTPN4-202ENST00000420482 ATP5EP56381 51 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms