RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 LINC00208Q96KT6 92 aa2.07□□□□□ -2.08
HMGB3P20-201ENST00000417997 PRO0628Q9UI54 55 aa2.07□□□□□ -2.08
HMGB3P20-201ENST00000417997 RYR2Q92736 4967 aa2.07□□□□□ -2.08
HMGB3P20-201ENST00000417997 FAM236DA0A1B0GTK5 79 aa2.06□□□□□ -2.08
HMGB3P20-201ENST00000417997 FAM236CP0DP71 79 aa2.06□□□□□ -2.08
HMGB3P20-201ENST00000417997 PRR4Q16378 134 aa2.06□□□□□ -2.08
HMGB3P20-201ENST00000417997 C1orf64Q8NEQ6 169 aa2.06□□□□□ -2.08
HMGB3P20-201ENST00000417997 MT1HL1P0DM35 61 aa2.05□□□□□ -2.08
HMGB3P20-201ENST00000417997 CYSTM1Q9H1C7 97 aa2.05□□□□□ -2.08
HMGB3P20-201ENST00000417997 DYNC1H1Q14204 4646 aaKnown RBP2.05□□□□□ -2.08
HMGB3P20-201ENST00000417997 LRP1BQ9NZR2 4599 aa2.05□□□□□ -2.08
HMGB3P20-201ENST00000417997 APOBP04114 4563 aaKnown RBP2.04□□□□□ -2.08
HMGB3P20-201ENST00000417997 LOC101927531A0A1B0GV80 90 aa2.04□□□□□ -2.08
HMGB3P20-201ENST00000417997 H7BZZ5 65 aa2.04□□□□□ -2.08
HMGB3P20-201ENST00000417997 PCOTHQ58A44 107 aa2.04□□□□□ -2.08
HMGB3P20-201ENST00000417997 SRRM2Q9UQ35 2752 aaKnown RBP2.04□□□□□ -2.08
HMGB3P20-201ENST00000417997 PKHD1P08F94 4074 aa2.04□□□□□ -2.08
HMGB3P20-201ENST00000417997 KMT2CQ8NEZ4 4911 aaKnown RBP2.03□□□□□ -2.08
HMGB3P20-201ENST00000417997 Q5W150 140 aa2.03□□□□□ -2.08
HMGB3P20-201ENST00000417997 ZCCHC13Q8WW36 166 aaKnown RBP2.03□□□□□ -2.08
HMGB3P20-201ENST00000417997 C20orf166-AS1Q96NR2 134 aa2.03□□□□□ -2.08
HMGB3P20-201ENST00000417997 SERP1Q9Y6X1 66 aa2.03□□□□□ -2.08
HMGB3P20-201ENST00000417997 V9GYY9 64 aa2.03□□□□□ -2.08
HMGB3P20-201ENST00000417997 A8MUU9 505 aa2.02□□□□□ -2.09
HMGB3P20-201ENST00000417997 C7orf65Q6ZTY9 151 aa2.02□□□□□ -2.09
HMGB3P20-201ENST00000417997 SMIM26A0A096LP01 95 aa2.01□□□□□ -2.09
HMGB3P20-201ENST00000417997 ATP11AUNQ6ZP68 121 aa2.01□□□□□ -2.09
HMGB3P20-201ENST00000417997 SPANXA2-OT1Q8N9U9 137 aa2.01□□□□□ -2.09
HMGB3P20-201ENST00000417997 RPL37P61927 97 aaKnown RBP2□□□□□ -2.09
HMGB3P20-201ENST00000417997 TPRXLQ17RH7 258 aa2□□□□□ -2.09
HMGB3P20-201ENST00000417997 CYP4F30PQ9H0H9 118 aa2□□□□□ -2.09
HMGB3P20-201ENST00000417997 PKHD1L1Q86WI1 4243 aa2□□□□□ -2.09
HMGB3P20-201ENST00000417997 FLG2Q5D862 2391 aaPredicted RBP2□□□□□ -2.09
HMGB3P20-201ENST00000417997 RYR3Q15413 4870 aa1.99□□□□□ -2.09
HMGB3P20-201ENST00000417997 HSPG2P98160 4391 aa1.99□□□□□ -2.09
HMGB3P20-201ENST00000417997 VPS13BQ7Z7G8 4022 aa1.99□□□□□ -2.09
HMGB3P20-201ENST00000417997 HRES1P13985 223 aa1.98□□□□□ -2.09
HMGB3P20-201ENST00000417997 CHKB-CPT1BH3BT56 60 aa1.97□□□□□ -2.09
HMGB3P20-201ENST00000417997 KRTAP10-10P60014 251 aa1.97□□□□□ -2.09
HMGB3P20-201ENST00000417997 FAT1Q14517 4588 aa1.97□□□□□ -2.09
HMGB3P20-201ENST00000417997 ACYP2P14621 99 aa1.96□□□□□ -2.1
HMGB3P20-201ENST00000417997 SPINK7P58062 85 aa1.96□□□□□ -2.1
HMGB3P20-201ENST00000417997 COA5Q86WW8 74 aa1.96□□□□□ -2.1
HMGB3P20-201ENST00000417997 DMAC1Q96GE9 116 aa1.96□□□□□ -2.1
HMGB3P20-201ENST00000417997 A8MUN3 132 aa1.95□□□□□ -2.1
HMGB3P20-201ENST00000417997 C4orf26Q17RF5 130 aa1.95□□□□□ -2.1
HMGB3P20-201ENST00000417997 PMAIP1Q13794 54 aa1.94□□□□□ -2.1
HMGB3P20-201ENST00000417997 RYR1P21817 5038 aa1.94□□□□□ -2.1
HMGB3P20-201ENST00000417997 COX6B2Q6YFQ2 88 aa1.93□□□□□ -2.1
HMGB3P20-201ENST00000417997 SPTSSBQ8NFR3 76 aa1.93□□□□□ -2.1
HMGB3P20-201ENST00000417997 BRK1Q8WUW1 75 aa1.93□□□□□ -2.1
HMGB3P20-201ENST00000417997 RBM12B-AS1Q9P1G2 102 aa1.93□□□□□ -2.1
HMGB3P20-201ENST00000417997 KIAA1109Q2LD37 5005 aa1.93□□□□□ -2.1
HMGB3P20-201ENST00000417997 EPPK1P58107 5090 aaKnown RBP1.92□□□□□ -2.1
HMGB3P20-201ENST00000417997 FAT3Q8TDW7 4589 aa1.91□□□□□ -2.1
HMGB3P20-201ENST00000417997 LRP1Q07954 4544 aaKnown RBP1.91□□□□□ -2.1
HMGB3P20-201ENST00000417997 Q1T7F1 81 aa1.91□□□□□ -2.1
HMGB3P20-201ENST00000417997 KTN1-AS1Q86SY8 53 aa1.9□□□□□ -2.11
HMGB3P20-201ENST00000417997 DMBT1Q9UGM3 2413 aaPredicted RBP1.9□□□□□ -2.11
HMGB3P20-201ENST00000417997 TNXBP22105 4242 aa1.89□□□□□ -2.11
HMGB3P20-201ENST00000417997 PRR15LQ9BU68 103 aa1.89□□□□□ -2.11
HMGB3P20-201ENST00000417997 S4R3F8 94 aa1.89□□□□□ -2.11
HMGB3P20-201ENST00000417997 A0A1B0GU69 56 aa1.88□□□□□ -2.11
HMGB3P20-201ENST00000417997 H1FX-AS1Q4G0G2 97 aa1.88□□□□□ -2.11
HMGB3P20-201ENST00000417997 BIRC6Q9NR09 4857 aa1.88□□□□□ -2.11
HMGB3P20-201ENST00000417997 SPRR5A0A1B0GTR4 108 aa1.87□□□□□ -2.11
HMGB3P20-201ENST00000417997 PSPHP1O15172 72 aa1.87□□□□□ -2.11
HMGB3P20-201ENST00000417997 LINC01558Q9Y6Z2 57 aa1.87□□□□□ -2.11
HMGB3P20-201ENST00000417997 MYCBP2O75592 4640 aa1.86□□□□□ -2.11
HMGB3P20-201ENST00000417997 HERC2O95714 4834 aa1.85□□□□□ -2.11
HMGB3P20-201ENST00000417997 KRTAP5-8O75690 187 aa1.85□□□□□ -2.11
HMGB3P20-201ENST00000417997 LCA10Q71F78 164 aa1.85□□□□□ -2.11
HMGB3P20-201ENST00000417997 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.11
HMGB3P20-201ENST00000417997 A6NED7 52 aa1.84□□□□□ -2.11
HMGB3P20-201ENST00000417997 Q5VV11 94 aa1.84□□□□□ -2.11
HMGB3P20-201ENST00000417997 KRTAP4-1Q9BYQ7 146 aa1.84□□□□□ -2.11
HMGB3P20-201ENST00000417997 CSAG1Q6PB30 78 aa1.83□□□□□ -2.12
HMGB3P20-201ENST00000417997 CAMK2N1Q7Z7J9 78 aa1.83□□□□□ -2.12
HMGB3P20-201ENST00000417997 CDC42SE1Q9NRR8 79 aa1.83□□□□□ -2.12
HMGB3P20-201ENST00000417997 KRTAP5-7Q6L8G8 165 aa1.82□□□□□ -2.12
HMGB3P20-201ENST00000417997 UQCR11O14957 56 aa1.81□□□□□ -2.12
HMGB3P20-201ENST00000417997 LPAP08519 4548 aa1.81□□□□□ -2.12
HMGB3P20-201ENST00000417997 A6NN06 94 aa1.8□□□□□ -2.12
HMGB3P20-201ENST00000417997 ABCA13Q86UQ4 5058 aa1.79□□□□□ -2.12
HMGB3P20-201ENST00000417997 A0A1B0GU33 70 aa1.79□□□□□ -2.12
HMGB3P20-201ENST00000417997 MIR22HGQ0VDD5 57 aa1.79□□□□□ -2.12
HMGB3P20-201ENST00000417997 ADM2Q7Z4H4 148 aa1.79□□□□□ -2.12
HMGB3P20-201ENST00000417997 H0YAA0 97 aa1.77□□□□□ -2.13
HMGB3P20-201ENST00000417997 M0R2T5 61 aa1.77□□□□□ -2.13
HMGB3P20-201ENST00000417997 KRTAP19-2Q3LHN2 52 aa1.77□□□□□ -2.13
HMGB3P20-201ENST00000417997 LRP2P98164 4655 aa1.76□□□□□ -2.13
HMGB3P20-201ENST00000417997 P0C880 135 aa1.76□□□□□ -2.13
HMGB3P20-201ENST00000417997 SPATA8Q6RVD6 105 aa1.76□□□□□ -2.13
HMGB3P20-201ENST00000417997 MUC17Q685J3 4493 aa1.75□□□□□ -2.13
HMGB3P20-201ENST00000417997 K7ERS5 55 aa1.75□□□□□ -2.13
HMGB3P20-201ENST00000417997 LINC01554Q52M75 96 aa1.75□□□□□ -2.13
HMGB3P20-201ENST00000417997 M0QZ58 72 aa1.74□□□□□ -2.13
HMGB3P20-201ENST00000417997 MT1HP80294 61 aa1.74□□□□□ -2.13
HMGB3P20-201ENST00000417997 R4GN34 69 aa1.74□□□□□ -2.13
HMGB3P20-201ENST00000417997 A0A0D9SG42 100 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms