RNA–Protein interactions for RNA: ENST00000417858.1

GABRA3-202, Transcript of gamma-aminobutyric acid type A receptor alpha3 subunit, humanhuman

TSL 3

Gene GABRA3, Length 338 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3-202ENST00000417858 CELSR3Q9NYQ7 3312 aa0.7□□□□□ -2.3
GABRA3-202ENST00000417858 CENPEQ02224 2701 aa0.7□□□□□ -2.3
GABRA3-202ENST00000417858 NBEAL1Q6ZS30 2694 aa0.69□□□□□ -2.3
GABRA3-202ENST00000417858 FBN3Q75N90 2809 aa0.69□□□□□ -2.3
GABRA3-202ENST00000417858 DNAH11Q96DT5 4516 aa0.69□□□□□ -2.3
GABRA3-202ENST00000417858 HRNRQ86YZ3 2850 aaPredicted RBP0.69□□□□□ -2.3
GABRA3-202ENST00000417858 FASNP49327 2511 aaKnown RBP0.69□□□□□ -2.3
GABRA3-202ENST00000417858 SPTAN1Q13813 2472 aaKnown RBP0.69□□□□□ -2.3
GABRA3-202ENST00000417858 TEP1Q99973 2627 aaKnown RBP0.68□□□□□ -2.3
GABRA3-202ENST00000417858 MAST4O15021 2626 aa0.68□□□□□ -2.3
GABRA3-202ENST00000417858 PRM1P04553 51 aa0.68□□□□□ -2.3
GABRA3-202ENST00000417858 SZT2Q5T011 3432 aa0.68□□□□□ -2.3
GABRA3-202ENST00000417858 FLNAP21333 2647 aaKnown RBP0.68□□□□□ -2.3
GABRA3-202ENST00000417858 CEP295Q9C0D2 2601 aa0.68□□□□□ -2.3
GABRA3-202ENST00000417858 TENM3Q9P273 2699 aa0.67□□□□□ -2.3
GABRA3-202ENST00000417858 BOD1L1Q8NFC6 3051 aa0.67□□□□□ -2.3
GABRA3-202ENST00000417858 RELNP78509 3460 aa0.67□□□□□ -2.3
GABRA3-202ENST00000417858 SMR3BP02814 79 aaPredicted RBP0.67□□□□□ -2.3
GABRA3-202ENST00000417858 LYSTQ99698 3801 aa0.67□□□□□ -2.3
GABRA3-202ENST00000417858 BSNQ9UPA5 3926 aa0.67□□□□□ -2.3
GABRA3-202ENST00000417858 KALRNO60229 2985 aa0.67□□□□□ -2.3
GABRA3-202ENST00000417858 NOTCH1P46531 2555 aa0.67□□□□□ -2.3
GABRA3-202ENST00000417858 SPENQ96T58 3664 aaKnown RBP0.67□□□□□ -2.3
GABRA3-202ENST00000417858 MYCBP2O75592 4640 aa0.66□□□□□ -2.3
GABRA3-202ENST00000417858 LAMA5O15230 3695 aa0.66□□□□□ -2.3
GABRA3-202ENST00000417858 NBPF19A0A087WUL8 3843 aa0.66□□□□□ -2.3
GABRA3-202ENST00000417858 TLN1Q9Y490 2541 aaKnown RBP0.66□□□□□ -2.3
GABRA3-202ENST00000417858 SACSQ9NZJ4 4579 aa0.65□□□□□ -2.31
GABRA3-202ENST00000417858 ADGRG4Q8IZF6 3080 aa0.65□□□□□ -2.31
GABRA3-202ENST00000417858 DEFB4AO15263 64 aa0.65□□□□□ -2.31
GABRA3-202ENST00000417858 MT1AP04731 61 aa0.65□□□□□ -2.31
GABRA3-202ENST00000417858 ANK2Q01484 3957 aa0.65□□□□□ -2.31
GABRA3-202ENST00000417858 FREM2Q5SZK8 3169 aa0.65□□□□□ -2.31
GABRA3-202ENST00000417858 AKAP9Q99996 3911 aa0.65□□□□□ -2.31
GABRA3-202ENST00000417858 CSMD1Q96PZ7 3565 aa0.65□□□□□ -2.31
GABRA3-202ENST00000417858 KMT2AQ03164 3969 aa0.64□□□□□ -2.31
GABRA3-202ENST00000417858 WDFY4Q6ZS81 3184 aa0.64□□□□□ -2.31
GABRA3-202ENST00000417858 DNAH8Q96JB1 4490 aa0.64□□□□□ -2.31
GABRA3-202ENST00000417858 DYNC2H1Q8NCM8 4307 aaKnown RBP0.64□□□□□ -2.31
GABRA3-202ENST00000417858 TNXBP22105 4242 aa0.64□□□□□ -2.31
GABRA3-202ENST00000417858 CFAP47Q6ZTR5 3102 aa0.64□□□□□ -2.31
GABRA3-202ENST00000417858 MGAM2Q2M2H8 2515 aa0.64□□□□□ -2.31
GABRA3-202ENST00000417858 SMG1Q96Q15 3661 aaKnown RBP0.63□□□□□ -2.31
GABRA3-202ENST00000417858 LAMA3Q16787 3333 aa0.63□□□□□ -2.31
GABRA3-202ENST00000417858 DMDP11532 3685 aa0.63□□□□□ -2.31
GABRA3-202ENST00000417858 SVEP1Q4LDE5 3571 aa0.63□□□□□ -2.31
GABRA3-202ENST00000417858 VPS13AQ96RL7 3174 aa0.63□□□□□ -2.31
GABRA3-202ENST00000417858 SPTBN5Q9NRC6 3674 aaKnown RBP0.62□□□□□ -2.31
GABRA3-202ENST00000417858 IGSF10Q6WRI0 2623 aa0.62□□□□□ -2.31
GABRA3-202ENST00000417858 SRCAPQ6ZRS2 3230 aa0.62□□□□□ -2.31
GABRA3-202ENST00000417858 KRTAP19-3Q7Z4W3 81 aa0.62□□□□□ -2.31
GABRA3-202ENST00000417858 CUBNO60494 3623 aa0.62□□□□□ -2.31
GABRA3-202ENST00000417858 PRKDCP78527 4128 aaKnown RBP0.62□□□□□ -2.31
GABRA3-202ENST00000417858 VPS13BQ7Z7G8 4022 aa0.62□□□□□ -2.31
GABRA3-202ENST00000417858 FAT2Q9NYQ8 4349 aa0.62□□□□□ -2.31
GABRA3-202ENST00000417858 STAB2Q8WWQ8 2551 aa0.61□□□□□ -2.31
GABRA3-202ENST00000417858 DCHS1Q96JQ0 3298 aa0.61□□□□□ -2.31
GABRA3-202ENST00000417858 LAMA1P25391 3075 aa0.61□□□□□ -2.31
GABRA3-202ENST00000417858 MYO9AB2RTY4 2548 aa0.61□□□□□ -2.31
GABRA3-202ENST00000417858 KRTAP19-5Q3LI72 72 aa0.6□□□□□ -2.31
GABRA3-202ENST00000417858 UTRNP46939 3433 aa0.6□□□□□ -2.31
GABRA3-202ENST00000417858 DNAH3Q8TD57 4116 aa0.6□□□□□ -2.31
GABRA3-202ENST00000417858 MUC3AQ02505 3323 aa0.59□□□□□ -2.31
GABRA3-202ENST00000417858 EP400Q96L91 3159 aa0.59□□□□□ -2.31
GABRA3-202ENST00000417858 ZNF469Q96JG9 3925 aaPredicted RBP0.59□□□□□ -2.31
GABRA3-202ENST00000417858 SPRR2DP22532 72 aa0.59□□□□□ -2.31
GABRA3-202ENST00000417858 SPRR2BP35325 72 aa0.59□□□□□ -2.31
GABRA3-202ENST00000417858 TENM1Q9UKZ4 2725 aa0.59□□□□□ -2.32
GABRA3-202ENST00000417858 ANK3Q12955 4377 aaKnown RBP0.59□□□□□ -2.32
GABRA3-202ENST00000417858 SPRR2AP35326 72 aa0.58□□□□□ -2.32
GABRA3-202ENST00000417858 LAMA2P24043 3122 aaKnown RBP0.58□□□□□ -2.32
GABRA3-202ENST00000417858 XIRP2A4UGR9 3374 aa0.57□□□□□ -2.32
GABRA3-202ENST00000417858 PKHD1L1Q86WI1 4243 aa0.57□□□□□ -2.32
GABRA3-202ENST00000417858 DNAH2Q9P225 4427 aa0.57□□□□□ -2.32
GABRA3-202ENST00000417858 SPEGQ15772 3267 aa0.56□□□□□ -2.32
GABRA3-202ENST00000417858 USP34Q70CQ2 3546 aa0.56□□□□□ -2.32
GABRA3-202ENST00000417858 GOLGB1Q14789 3259 aaKnown RBP0.56□□□□□ -2.32
GABRA3-202ENST00000417858 DNAH10Q8IVF4 4471 aa0.56□□□□□ -2.32
GABRA3-202ENST00000417858 ASPMQ8IZT6 3477 aa0.55□□□□□ -2.32
GABRA3-202ENST00000417858 CSMD2Q7Z408 3487 aa0.55□□□□□ -2.32
GABRA3-202ENST00000417858 LOC400499M0QZD8 3231 aa0.55□□□□□ -2.32
GABRA3-202ENST00000417858 AHNAK2Q8IVF2 5795 aa0.55□□□□□ -2.32
GABRA3-202ENST00000417858 DNAH9Q9NYC9 4486 aa0.54□□□□□ -2.32
GABRA3-202ENST00000417858 FLGP20930 4061 aaPredicted RBP0.54□□□□□ -2.32
GABRA3-202ENST00000417858 MT1EP04732 61 aa0.54□□□□□ -2.32
GABRA3-202ENST00000417858 KRTAP21-1Q3LI58 79 aa0.54□□□□□ -2.32
GABRA3-202ENST00000417858 KRTAP6-2Q3LI66 62 aa0.54□□□□□ -2.32
GABRA3-202ENST00000417858 HSPG2P98160 4391 aa0.54□□□□□ -2.32
GABRA3-202ENST00000417858 DNAH1Q9P2D7 4330 aa0.54□□□□□ -2.32
GABRA3-202ENST00000417858 VPS13CQ709C8 3753 aa0.53□□□□□ -2.32
GABRA3-202ENST00000417858 PKD1P98161 4303 aa0.53□□□□□ -2.32
GABRA3-202ENST00000417858 FRAS1Q86XX4 4008 aa0.53□□□□□ -2.32
GABRA3-202ENST00000417858 SPRR2FQ96RM1 72 aa0.53□□□□□ -2.32
GABRA3-202ENST00000417858 HUWE1Q7Z6Z7 4374 aaKnown RBP0.52□□□□□ -2.33
GABRA3-202ENST00000417858 DNAH7Q8WXX0 4024 aa0.52□□□□□ -2.33
GABRA3-202ENST00000417858 CMYA5Q8N3K9 4069 aa0.52□□□□□ -2.33
GABRA3-202ENST00000417858 FAT3Q8TDW7 4589 aa0.52□□□□□ -2.33
GABRA3-202ENST00000417858 TRRAPQ9Y4A5 3859 aa0.51□□□□□ -2.33
GABRA3-202ENST00000417858 HECTD4Q9Y4D8 3996 aa0.51□□□□□ -2.33
GABRA3-202ENST00000417858 LPAP08519 4548 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms