RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 KLKP1Q107X0 134 aa11.33□□□□□ -0.6
VEGFA-208ENST00000417285 ATOX1O00244 68 aa11.32□□□□□ -0.6
VEGFA-208ENST00000417285 H0Y9P7 68 aa11.3□□□□□ -0.6
VEGFA-208ENST00000417285 A0A087WVE0 104 aa11.27□□□□□ -0.61
VEGFA-208ENST00000417285 LINC00643Q86TS7 51 aa11.24□□□□□ -0.61
VEGFA-208ENST00000417285 CRIPTQ9P021 101 aa11.24□□□□□ -0.61
VEGFA-208ENST00000417285 KRTAP10-5P60370 271 aa11.19□□□□□ -0.62
VEGFA-208ENST00000417285 IMUPQ9GZP8 106 aa11.19□□□□□ -0.62
VEGFA-208ENST00000417285 NDUFC1O43677 76 aa11.18□□□□□ -0.62
VEGFA-208ENST00000417285 A0A1B0GV90 55 aa11.15□□□□□ -0.62
VEGFA-208ENST00000417285 A8MUN3 132 aa11.14□□□□□ -0.63
VEGFA-208ENST00000417285 NEBP20929 6669 aa11.11□□□□□ -0.63
VEGFA-208ENST00000417285 LINC00208Q96KT6 92 aa11.11□□□□□ -0.63
VEGFA-208ENST00000417285 H0YAA0 97 aa11.09□□□□□ -0.63
VEGFA-208ENST00000417285 MP68P56378 58 aa11.07□□□□□ -0.64
VEGFA-208ENST00000417285 OCR1Q9BZK8 76 aa11.04□□□□□ -0.64
VEGFA-208ENST00000417285 ADM2Q7Z4H4 148 aa10.96□□□□□ -0.65
VEGFA-208ENST00000417285 MUC12Q9UKN1 5478 aa10.94□□□□□ -0.66
VEGFA-208ENST00000417285 J3QR89 54 aa10.92□□□□□ -0.66
VEGFA-208ENST00000417285 KRTAP5-9P26371 169 aa10.91□□□□□ -0.66
VEGFA-208ENST00000417285 H3BPC8 53 aa10.9□□□□□ -0.66
VEGFA-208ENST00000417285 SCGB1A1P11684 91 aa10.83□□□□□ -0.68
VEGFA-208ENST00000417285 KMT2DO14686 5537 aa10.8□□□□□ -0.68
VEGFA-208ENST00000417285 DMAC1Q96GE9 116 aa10.77□□□□□ -0.69
VEGFA-208ENST00000417285 PRO2289Q9P1D8 64 aa10.77□□□□□ -0.69
VEGFA-208ENST00000417285 KRTAP20-1Q3LI63 56 aa10.75□□□□□ -0.69
VEGFA-208ENST00000417285 C20orf197Q8N268 126 aa10.73□□□□□ -0.69
VEGFA-208ENST00000417285 PLAC4Q8WY50 150 aa10.71□□□□□ -0.69
VEGFA-208ENST00000417285 R4GN34 69 aa10.71□□□□□ -0.69
VEGFA-208ENST00000417285 MDN1Q9NU22 5596 aa10.7□□□□□ -0.7
VEGFA-208ENST00000417285 P0C880 135 aa10.67□□□□□ -0.7
VEGFA-208ENST00000417285 MT1XP80297 61 aa10.62□□□□□ -0.71
VEGFA-208ENST00000417285 M0QZ58 72 aa10.6□□□□□ -0.71
VEGFA-208ENST00000417285 TRAV7A0A075B6U4 112 aa10.56□□□□□ -0.72
VEGFA-208ENST00000417285 KRTAP3-2Q9BYR7 98 aa10.55□□□□□ -0.72
VEGFA-208ENST00000417285 SPRR2FQ96RM1 72 aa10.53□□□□□ -0.72
VEGFA-208ENST00000417285 ACYP2P14621 99 aa10.52□□□□□ -0.73
VEGFA-208ENST00000417285 SMIM20Q8N5G0 67 aa10.52□□□□□ -0.73
VEGFA-208ENST00000417285 K7ERU9 68 aa10.51□□□□□ -0.73
VEGFA-208ENST00000417285 MT-ATP8P03928 68 aa10.5□□□□□ -0.73
VEGFA-208ENST00000417285 KRTAP2-3P0C7H8 128 aa10.47□□□□□ -0.73
VEGFA-208ENST00000417285 KRTAP2-4Q9BYR9 128 aa10.47□□□□□ -0.73
VEGFA-208ENST00000417285 KRTAP12-2P59991 146 aa10.46□□□□□ -0.73
VEGFA-208ENST00000417285 LINC01554Q52M75 96 aa10.45□□□□□ -0.74
VEGFA-208ENST00000417285 KRTAP8-1Q8IUC2 63 aa10.45□□□□□ -0.74
VEGFA-208ENST00000417285 SPTSSBQ8NFR3 76 aa10.44□□□□□ -0.74
VEGFA-208ENST00000417285 SPRR2EP22531 72 aa10.41□□□□□ -0.74
VEGFA-208ENST00000417285 SPRR2BP35325 72 aa10.41□□□□□ -0.74
VEGFA-208ENST00000417285 SPRR2AP35326 72 aa10.41□□□□□ -0.74
VEGFA-208ENST00000417285 CHKB-CPT1BH3BT56 60 aa10.34□□□□□ -0.75
VEGFA-208ENST00000417285 SNURFQ9Y675 71 aa10.27□□□□□ -0.77
VEGFA-208ENST00000417285 LCE1AQ5T7P2 110 aa10.26□□□□□ -0.77
VEGFA-208ENST00000417285 KRTAP4-8A0A0G2JLE6 195 aa10.21□□□□□ -0.77
VEGFA-208ENST00000417285 KRTAP4-8Q9BYQ9 185 aa10.21□□□□□ -0.77
VEGFA-208ENST00000417285 SPANXA2-OT1Q8N9U9 137 aa10.17□□□□□ -0.78
VEGFA-208ENST00000417285 KRTAP10-7P60409 375 aaPredicted RBP10.12□□□□□ -0.79
VEGFA-208ENST00000417285 KRTAP10-12P60413 245 aa10.12□□□□□ -0.79
VEGFA-208ENST00000417285 KRTAP2-2Q9BYT5 123 aa10.12□□□□□ -0.79
VEGFA-208ENST00000417285 KRTAP2-1Q9BYU5 128 aa10.12□□□□□ -0.79
VEGFA-208ENST00000417285 SERP2Q8N6R1 65 aa10.09□□□□□ -0.79
VEGFA-208ENST00000417285 SPRR2DP22532 72 aa10.08□□□□□ -0.8
VEGFA-208ENST00000417285 KRTAP13-4Q3LI77 160 aa9.93□□□□□ -0.82
VEGFA-208ENST00000417285 COA5Q86WW8 74 aa9.89□□□□□ -0.83
VEGFA-208ENST00000417285 CAMK2N1Q7Z7J9 78 aa9.84□□□□□ -0.83
VEGFA-208ENST00000417285 LCE3BQ5TA77 95 aa9.82□□□□□ -0.84
VEGFA-208ENST00000417285 SEC61GP60059 68 aa9.8□□□□□ -0.84
VEGFA-208ENST00000417285 SERP1Q9Y6X1 66 aa9.77□□□□□ -0.85
VEGFA-208ENST00000417285 COX7CP15954 63 aa9.76□□□□□ -0.85
VEGFA-208ENST00000417285 A0A0D9SG42 100 aa9.66□□□□□ -0.86
VEGFA-208ENST00000417285 H7BZZ5 65 aa9.62□□□□□ -0.87
VEGFA-208ENST00000417285 A0A1B0GU33 70 aa9.6□□□□□ -0.87
VEGFA-208ENST00000417285 SPATA8Q6RVD6 105 aa9.6□□□□□ -0.87
VEGFA-208ENST00000417285 CYSTM1Q9H1C7 97 aa9.57□□□□□ -0.88
VEGFA-208ENST00000417285 SPINT4Q6UDR6 99 aa9.54□□□□□ -0.88
VEGFA-208ENST00000417285 ANAPC13Q9BS18 74 aa9.51□□□□□ -0.89
VEGFA-208ENST00000417285 KRTAP19-7Q3SYF9 63 aa9.49□□□□□ -0.89
VEGFA-208ENST00000417285 LCE5AQ5TCM9 118 aa9.47□□□□□ -0.89
VEGFA-208ENST00000417285 KRTAP12-1P59990 96 aa9.44□□□□□ -0.9
VEGFA-208ENST00000417285 MT1EP04732 61 aa9.43□□□□□ -0.9
VEGFA-208ENST00000417285 KRTAP19-3Q7Z4W3 81 aa9.42□□□□□ -0.9
VEGFA-208ENST00000417285 A0A1B0GU69 56 aa9.41□□□□□ -0.9
VEGFA-208ENST00000417285 SMIM26A0A096LP01 95 aa9.36□□□□□ -0.91
VEGFA-208ENST00000417285 DSTQ03001 7570 aaKnown RBP9.34□□□□□ -0.91
VEGFA-208ENST00000417285 CCDC179H3BU77 68 aa9.3□□□□□ -0.92
VEGFA-208ENST00000417285 A8MU10 97 aa9.22□□□□□ -0.93
VEGFA-208ENST00000417285 MT1GP13640 62 aa9.22□□□□□ -0.93
VEGFA-208ENST00000417285 KRTAP19-5Q3LI72 72 aa9.22□□□□□ -0.93
VEGFA-208ENST00000417285 PP632Q6XCG6 107 aa9.16□□□□□ -0.94
VEGFA-208ENST00000417285 GPR98Q8WXG9 6306 aa9.15□□□□□ -0.94
VEGFA-208ENST00000417285 ATP5EP56381 51 aaPredicted RBP9.15□□□□□ -0.94
VEGFA-208ENST00000417285 KRTAP4-9Q9BYQ8 210 aa9.15□□□□□ -0.94
VEGFA-208ENST00000417285 PRR15LQ9BU68 103 aa9.13□□□□□ -0.95
VEGFA-208ENST00000417285 TNP1P09430 55 aa9.06□□□□□ -0.96
VEGFA-208ENST00000417285 C10orf95Q9H7T3 257 aa9.02□□□□□ -0.97
VEGFA-208ENST00000417285 TMEM258P61165 79 aa8.99□□□□□ -0.97
VEGFA-208ENST00000417285 MT1MQ8N339 61 aa8.99□□□□□ -0.97
VEGFA-208ENST00000417285 MT1LQ93083 61 aa8.99□□□□□ -0.97
VEGFA-208ENST00000417285 LCE3AQ5TA76 89 aa8.98□□□□□ -0.97
VEGFA-208ENST00000417285 LINC01558Q9Y6Z2 57 aa8.98□□□□□ -0.97
VEGFA-208ENST00000417285 LCE4AQ5TA78 99 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms