RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 KLKP1Q107X0 134 aa7.97□□□□□ -1.13
CPNE1-210ENST00000416778 K7ERU9 68 aa7.96□□□□□ -1.14
CPNE1-210ENST00000416778 TRAV22A0A0B4J277 110 aa7.95□□□□□ -1.14
CPNE1-210ENST00000416778 A6NN06 94 aa7.95□□□□□ -1.14
CPNE1-210ENST00000416778 LOC101927531A0A1B0GV80 90 aa7.94□□□□□ -1.14
CPNE1-210ENST00000416778 UQCRQO14949 82 aa7.89□□□□□ -1.15
CPNE1-210ENST00000416778 HIST1H4AP62805 103 aaKnown RBP7.89□□□□□ -1.15
CPNE1-210ENST00000416778 KRTAP10-5P60370 271 aa7.88□□□□□ -1.15
CPNE1-210ENST00000416778 CRIPTQ9P021 101 aa7.86□□□□□ -1.15
CPNE1-210ENST00000416778 H0Y9P7 68 aa7.83□□□□□ -1.16
CPNE1-210ENST00000416778 IMUPQ9GZP8 106 aa7.83□□□□□ -1.16
CPNE1-210ENST00000416778 NEBP20929 6669 aa7.83□□□□□ -1.16
CPNE1-210ENST00000416778 ATOX1O00244 68 aa7.82□□□□□ -1.16
CPNE1-210ENST00000416778 NDUFC1O43677 76 aa7.8□□□□□ -1.16
CPNE1-210ENST00000416778 MT-ATP8P03928 68 aa7.8□□□□□ -1.16
CPNE1-210ENST00000416778 H0YAA0 97 aa7.78□□□□□ -1.16
CPNE1-210ENST00000416778 A8MUN3 132 aa7.73□□□□□ -1.17
CPNE1-210ENST00000416778 LINC00208Q96KT6 92 aa7.72□□□□□ -1.17
CPNE1-210ENST00000416778 MUC12Q9UKN1 5478 aa7.71□□□□□ -1.17
CPNE1-210ENST00000416778 OCR1Q9BZK8 76 aa7.7□□□□□ -1.18
CPNE1-210ENST00000416778 ADM2Q7Z4H4 148 aa7.68□□□□□ -1.18
CPNE1-210ENST00000416778 KRTAP5-9P26371 169 aa7.65□□□□□ -1.18
CPNE1-210ENST00000416778 MP68P56378 58 aa7.63□□□□□ -1.19
CPNE1-210ENST00000416778 SCGB1A1P11684 91 aa7.6□□□□□ -1.19
CPNE1-210ENST00000416778 KMT2DO14686 5537 aa7.58□□□□□ -1.2
CPNE1-210ENST00000416778 H3BPC8 53 aa7.53□□□□□ -1.2
CPNE1-210ENST00000416778 SMIM20Q8N5G0 67 aa7.53□□□□□ -1.2
CPNE1-210ENST00000416778 MT1XP80297 61 aa7.52□□□□□ -1.21
CPNE1-210ENST00000416778 MDN1Q9NU22 5596 aa7.52□□□□□ -1.21
CPNE1-210ENST00000416778 TRAV7A0A075B6U4 112 aa7.51□□□□□ -1.21
CPNE1-210ENST00000416778 P0C880 135 aa7.51□□□□□ -1.21
CPNE1-210ENST00000416778 PLAC4Q8WY50 150 aa7.49□□□□□ -1.21
CPNE1-210ENST00000416778 PRO2289Q9P1D8 64 aa7.49□□□□□ -1.21
CPNE1-210ENST00000416778 DMAC1Q96GE9 116 aa7.48□□□□□ -1.21
CPNE1-210ENST00000416778 KRTAP20-1Q3LI63 56 aa7.47□□□□□ -1.21
CPNE1-210ENST00000416778 KRTAP3-2Q9BYR7 98 aa7.47□□□□□ -1.21
CPNE1-210ENST00000416778 R4GN34 69 aa7.47□□□□□ -1.21
CPNE1-210ENST00000416778 C20orf197Q8N268 126 aa7.43□□□□□ -1.22
CPNE1-210ENST00000416778 SERP2Q8N6R1 65 aa7.41□□□□□ -1.22
CPNE1-210ENST00000416778 M0QZ58 72 aa7.4□□□□□ -1.22
CPNE1-210ENST00000416778 SPRR2FQ96RM1 72 aa7.36□□□□□ -1.23
CPNE1-210ENST00000416778 KRTAP12-2P59991 146 aa7.35□□□□□ -1.23
CPNE1-210ENST00000416778 KRTAP8-1Q8IUC2 63 aa7.31□□□□□ -1.24
CPNE1-210ENST00000416778 SNURFQ9Y675 71 aa7.31□□□□□ -1.24
CPNE1-210ENST00000416778 ACYP2P14621 99 aa7.3□□□□□ -1.24
CPNE1-210ENST00000416778 COX7CP15954 63 aa7.3□□□□□ -1.24
CPNE1-210ENST00000416778 LINC01554Q52M75 96 aa7.3□□□□□ -1.24
CPNE1-210ENST00000416778 KRTAP2-3P0C7H8 128 aa7.29□□□□□ -1.24
CPNE1-210ENST00000416778 PCP4P48539 62 aa7.29□□□□□ -1.24
CPNE1-210ENST00000416778 KRTAP2-4Q9BYR9 128 aa7.29□□□□□ -1.24
CPNE1-210ENST00000416778 SPRR2EP22531 72 aa7.27□□□□□ -1.25
CPNE1-210ENST00000416778 SPRR2BP35325 72 aa7.27□□□□□ -1.25
CPNE1-210ENST00000416778 SPRR2AP35326 72 aa7.27□□□□□ -1.25
CPNE1-210ENST00000416778 KRTAP4-8A0A0G2JLE6 195 aa7.25□□□□□ -1.25
CPNE1-210ENST00000416778 KRTAP4-8Q9BYQ9 185 aa7.25□□□□□ -1.25
CPNE1-210ENST00000416778 ANAPC13Q9BS18 74 aa7.22□□□□□ -1.25
CPNE1-210ENST00000416778 LCE1AQ5T7P2 110 aa7.21□□□□□ -1.26
CPNE1-210ENST00000416778 SPTSSBQ8NFR3 76 aa7.19□□□□□ -1.26
CPNE1-210ENST00000416778 KRTAP10-7P60409 375 aaPredicted RBP7.18□□□□□ -1.26
CPNE1-210ENST00000416778 SPANXA2-OT1Q8N9U9 137 aa7.18□□□□□ -1.26
CPNE1-210ENST00000416778 CYSTM1Q9H1C7 97 aa7.17□□□□□ -1.26
CPNE1-210ENST00000416778 KRTAP10-12P60413 245 aa7.15□□□□□ -1.26
CPNE1-210ENST00000416778 H7BZZ5 65 aa7.12□□□□□ -1.27
CPNE1-210ENST00000416778 CHKB-CPT1BH3BT56 60 aa7.1□□□□□ -1.27
CPNE1-210ENST00000416778 CCDC179H3BU77 68 aa7.1□□□□□ -1.27
CPNE1-210ENST00000416778 KRTAP2-2Q9BYT5 123 aa7.06□□□□□ -1.28
CPNE1-210ENST00000416778 KRTAP2-1Q9BYU5 128 aa7.06□□□□□ -1.28
CPNE1-210ENST00000416778 SPRR2DP22532 72 aa7.03□□□□□ -1.28
CPNE1-210ENST00000416778 KRTAP13-4Q3LI77 160 aa6.98□□□□□ -1.29
CPNE1-210ENST00000416778 COA5Q86WW8 74 aa6.94□□□□□ -1.3
CPNE1-210ENST00000416778 ATP5EP56381 51 aaPredicted RBP6.87□□□□□ -1.31
CPNE1-210ENST00000416778 LCE3BQ5TA77 95 aa6.86□□□□□ -1.31
CPNE1-210ENST00000416778 TMEM258P61165 79 aa6.85□□□□□ -1.31
CPNE1-210ENST00000416778 CAMK2N1Q7Z7J9 78 aa6.84□□□□□ -1.31
CPNE1-210ENST00000416778 SEC61GP60059 68 aa6.73□□□□□ -1.33
CPNE1-210ENST00000416778 KRTAP19-7Q3SYF9 63 aa6.73□□□□□ -1.33
CPNE1-210ENST00000416778 SERP1Q9Y6X1 66 aa6.73□□□□□ -1.33
CPNE1-210ENST00000416778 A0A0D9SG42 100 aa6.71□□□□□ -1.34
CPNE1-210ENST00000416778 SPATA8Q6RVD6 105 aa6.71□□□□□ -1.34
CPNE1-210ENST00000416778 LCE5AQ5TCM9 118 aa6.68□□□□□ -1.34
CPNE1-210ENST00000416778 A0A1B0GU33 70 aa6.67□□□□□ -1.34
CPNE1-210ENST00000416778 DSTQ03001 7570 aaKnown RBP6.66□□□□□ -1.34
CPNE1-210ENST00000416778 MT1EP04732 61 aa6.66□□□□□ -1.34
CPNE1-210ENST00000416778 SPINT4Q6UDR6 99 aa6.63□□□□□ -1.35
CPNE1-210ENST00000416778 KRTAP19-3Q7Z4W3 81 aa6.62□□□□□ -1.35
CPNE1-210ENST00000416778 KRTAP12-1P59990 96 aa6.61□□□□□ -1.35
CPNE1-210ENST00000416778 A0A1B0GU69 56 aa6.55□□□□□ -1.36
CPNE1-210ENST00000416778 LINC01558Q9Y6Z2 57 aa6.54□□□□□ -1.36
CPNE1-210ENST00000416778 KRTAP19-5Q3LI72 72 aa6.53□□□□□ -1.36
CPNE1-210ENST00000416778 MT1GP13640 62 aa6.48□□□□□ -1.37
CPNE1-210ENST00000416778 SMIM26A0A096LP01 95 aa6.46□□□□□ -1.38
CPNE1-210ENST00000416778 PRR15LQ9BU68 103 aa6.45□□□□□ -1.38
CPNE1-210ENST00000416778 KRTAP4-9Q9BYQ8 210 aa6.44□□□□□ -1.38
CPNE1-210ENST00000416778 A8MU10 97 aa6.43□□□□□ -1.38
CPNE1-210ENST00000416778 RPS28P62857 69 aaKnown RBP6.42□□□□□ -1.38
CPNE1-210ENST00000416778 Q1T7F1 81 aa6.39□□□□□ -1.39
CPNE1-210ENST00000416778 GPR98Q8WXG9 6306 aa6.38□□□□□ -1.39
CPNE1-210ENST00000416778 PP632Q6XCG6 107 aa6.37□□□□□ -1.39
CPNE1-210ENST00000416778 C10orf95Q9H7T3 257 aa6.36□□□□□ -1.39
CPNE1-210ENST00000416778 V9GYY9 64 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms