RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 ANKRD11Q6UB99 2663 aaPredicted RBP0.75□□□□□ -2.29
CTDSPL-203ENST00000416688 NCOR2Q9Y618 2525 aa0.75□□□□□ -2.29
CTDSPL-203ENST00000416688 NBEAQ8NFP9 2946 aa0.75□□□□□ -2.29
CTDSPL-203ENST00000416688 FSIP2Q5CZC0 6907 aa0.74□□□□□ -2.29
CTDSPL-203ENST00000416688 USP9XQ93008 2570 aaPredicted RBP0.74□□□□□ -2.29
CTDSPL-203ENST00000416688 MUC19Q7Z5P9 8384 aa0.74□□□□□ -2.29
CTDSPL-203ENST00000416688 DYNC2H1Q8NCM8 4307 aaKnown RBP0.74□□□□□ -2.29
CTDSPL-203ENST00000416688 LAMA5O15230 3695 aa0.74□□□□□ -2.29
CTDSPL-203ENST00000416688 FLNBO75369 2602 aaKnown RBP0.73□□□□□ -2.29
CTDSPL-203ENST00000416688 PKHD1L1Q86WI1 4243 aa0.73□□□□□ -2.29
CTDSPL-203ENST00000416688 SPTBN5Q9NRC6 3674 aaKnown RBP0.73□□□□□ -2.29
CTDSPL-203ENST00000416688 CRCT1Q9UGL9 99 aa0.73□□□□□ -2.29
CTDSPL-203ENST00000416688 PRUNE2Q8WUY3 3088 aa0.73□□□□□ -2.29
CTDSPL-203ENST00000416688 DNAH2Q9P225 4427 aa0.73□□□□□ -2.29
CTDSPL-203ENST00000416688 MYO18BQ8IUG5 2567 aa0.73□□□□□ -2.29
CTDSPL-203ENST00000416688 WDFY4Q6ZS81 3184 aa0.73□□□□□ -2.29
CTDSPL-203ENST00000416688 TRIOO75962 3097 aa0.73□□□□□ -2.29
CTDSPL-203ENST00000416688 ATMQ13315 3056 aa0.73□□□□□ -2.29
CTDSPL-203ENST00000416688 HTN1P15515 57 aa0.72□□□□□ -2.29
CTDSPL-203ENST00000416688 CD52P31358 61 aa0.72□□□□□ -2.29
CTDSPL-203ENST00000416688 DEFB124Q8NES8 71 aa0.72□□□□□ -2.29
CTDSPL-203ENST00000416688 HECTD4Q9Y4D8 3996 aa0.72□□□□□ -2.29
CTDSPL-203ENST00000416688 ANKHD1Q8IWZ3 2542 aaKnown RBP0.72□□□□□ -2.29
CTDSPL-203ENST00000416688 DSTQ03001 7570 aaKnown RBP0.72□□□□□ -2.29
CTDSPL-203ENST00000416688 ANK3Q12955 4377 aaKnown RBP0.71□□□□□ -2.3
CTDSPL-203ENST00000416688 NBEAL2Q6ZNJ1 2754 aa0.71□□□□□ -2.3
CTDSPL-203ENST00000416688 CUBNO60494 3623 aa0.71□□□□□ -2.3
CTDSPL-203ENST00000416688 A0A096LNI7 61 aa0.71□□□□□ -2.3
CTDSPL-203ENST00000416688 KRTAP8-1Q8IUC2 63 aa0.71□□□□□ -2.3
CTDSPL-203ENST00000416688 DEFB108BQ8NET1 73 aa0.71□□□□□ -2.3
CTDSPL-203ENST00000416688 FAT4Q6V0I7 4981 aa0.71□□□□□ -2.3
CTDSPL-203ENST00000416688 COL7A1Q02388 2944 aa0.71□□□□□ -2.3
CTDSPL-203ENST00000416688 DOPEY1Q5JWR5 2465 aa0.71□□□□□ -2.3
CTDSPL-203ENST00000416688 PKD1P98161 4303 aa0.7□□□□□ -2.3
CTDSPL-203ENST00000416688 SZT2Q5T011 3432 aa0.7□□□□□ -2.3
CTDSPL-203ENST00000416688 HIVEP1P15822 2718 aa0.7□□□□□ -2.3
CTDSPL-203ENST00000416688 EYSQ5T1H1 3165 aa0.7□□□□□ -2.3
CTDSPL-203ENST00000416688 HSPG2P98160 4391 aa0.7□□□□□ -2.3
CTDSPL-203ENST00000416688 VCANP13611 3396 aa0.7□□□□□ -2.3
CTDSPL-203ENST00000416688 C5orf42Q9H799 3197 aa0.69□□□□□ -2.3
CTDSPL-203ENST00000416688 SPRR2DP22532 72 aa0.69□□□□□ -2.3
CTDSPL-203ENST00000416688 Q9Y3F1 56 aa0.69□□□□□ -2.3
CTDSPL-203ENST00000416688 SPG11Q96JI7 2443 aa0.68□□□□□ -2.3
CTDSPL-203ENST00000416688 AKAP9Q99996 3911 aa0.68□□□□□ -2.3
CTDSPL-203ENST00000416688 MKI67P46013 3256 aaKnown RBP0.68□□□□□ -2.3
CTDSPL-203ENST00000416688 ACACBO00763 2458 aa0.68□□□□□ -2.3
CTDSPL-203ENST00000416688 KRTAP21-2Q3LI59 83 aa0.68□□□□□ -2.3
CTDSPL-203ENST00000416688 SSPOA2VEC9 5147 aa0.68□□□□□ -2.3
CTDSPL-203ENST00000416688 LRBAP50851 2863 aa0.67□□□□□ -2.3
CTDSPL-203ENST00000416688 MUC5ACP98088 5654 aa0.67□□□□□ -2.3
CTDSPL-203ENST00000416688 SPRR2BP35325 72 aa0.67□□□□□ -2.3
CTDSPL-203ENST00000416688 FLGP20930 4061 aaPredicted RBP0.67□□□□□ -2.3
CTDSPL-203ENST00000416688 WDR87Q6ZQQ6 2873 aa0.67□□□□□ -2.3
CTDSPL-203ENST00000416688 LAMA2P24043 3122 aaKnown RBP0.67□□□□□ -2.3
CTDSPL-203ENST00000416688 NIPBLQ6KC79 2804 aaeCLIP0.66□□□□□ -2.3
CTDSPL-203ENST00000416688 MUC3AQ02505 3323 aa0.66□□□□□ -2.3
CTDSPL-203ENST00000416688 DEFB136Q30KP8 78 aa0.66□□□□□ -2.3
CTDSPL-203ENST00000416688 CSMD1Q96PZ7 3565 aa0.66□□□□□ -2.3
CTDSPL-203ENST00000416688 BOD1L1Q8NFC6 3051 aa0.66□□□□□ -2.3
CTDSPL-203ENST00000416688 DNAH7Q8WXX0 4024 aa0.66□□□□□ -2.3
CTDSPL-203ENST00000416688 MDN1Q9NU22 5596 aa0.66□□□□□ -2.3
CTDSPL-203ENST00000416688 SONP18583 2426 aaKnown RBP0.66□□□□□ -2.3
CTDSPL-203ENST00000416688 ITPR1Q14643 2758 aa0.66□□□□□ -2.3
CTDSPL-203ENST00000416688 HRNRQ86YZ3 2850 aaPredicted RBP0.66□□□□□ -2.3
CTDSPL-203ENST00000416688 TENM1Q9UKZ4 2725 aa0.66□□□□□ -2.3
CTDSPL-203ENST00000416688 ZANQ9Y493 2812 aa0.65□□□□□ -2.31
CTDSPL-203ENST00000416688 DNAH12Q6ZR08 3092 aa0.65□□□□□ -2.31
CTDSPL-203ENST00000416688 TLN2Q9Y4G6 2542 aa0.65□□□□□ -2.31
CTDSPL-203ENST00000416688 CFAP47Q6ZTR5 3102 aa0.64□□□□□ -2.31
CTDSPL-203ENST00000416688 LAMA3Q16787 3333 aa0.64□□□□□ -2.31
CTDSPL-203ENST00000416688 TGP01266 2768 aa0.64□□□□□ -2.31
CTDSPL-203ENST00000416688 HERC2O95714 4834 aa0.64□□□□□ -2.31
CTDSPL-203ENST00000416688 DNAH6Q9C0G6 4158 aa0.64□□□□□ -2.31
CTDSPL-203ENST00000416688 DEFB133Q30KQ1 61 aa0.64□□□□□ -2.31
CTDSPL-203ENST00000416688 ADGRG4Q8IZF6 3080 aa0.64□□□□□ -2.31
CTDSPL-203ENST00000416688 SMG1Q96Q15 3661 aaKnown RBP0.64□□□□□ -2.31
CTDSPL-203ENST00000416688 DNAH9Q9NYC9 4486 aa0.64□□□□□ -2.31
CTDSPL-203ENST00000416688 USP34Q70CQ2 3546 aa0.63□□□□□ -2.31
CTDSPL-203ENST00000416688 FASNP49327 2511 aaKnown RBP0.63□□□□□ -2.31
CTDSPL-203ENST00000416688 MT1AP04731 61 aa0.63□□□□□ -2.31
CTDSPL-203ENST00000416688 SPRR2AP35326 72 aa0.63□□□□□ -2.31
CTDSPL-203ENST00000416688 LRP1Q07954 4544 aaKnown RBP0.63□□□□□ -2.31
CTDSPL-203ENST00000416688 FREM2Q5SZK8 3169 aa0.63□□□□□ -2.31
CTDSPL-203ENST00000416688 LPAP08519 4548 aa0.63□□□□□ -2.31
CTDSPL-203ENST00000416688 DNAH1Q9P2D7 4330 aa0.62□□□□□ -2.31
CTDSPL-203ENST00000416688 MXRA5Q9NR99 2828 aa0.62□□□□□ -2.31
CTDSPL-203ENST00000416688 SYNE1Q8NF91 8797 aaKnown RBP0.62□□□□□ -2.31
CTDSPL-203ENST00000416688 RPS29P62273 56 aaKnown RBP0.62□□□□□ -2.31
CTDSPL-203ENST00000416688 KRTAP21-1Q3LI58 79 aa0.62□□□□□ -2.31
CTDSPL-203ENST00000416688 XIRP2A4UGR9 3374 aa0.62□□□□□ -2.31
CTDSPL-203ENST00000416688 KMT2DO14686 5537 aa0.62□□□□□ -2.31
CTDSPL-203ENST00000416688 DMDP11532 3685 aa0.62□□□□□ -2.31
CTDSPL-203ENST00000416688 DNAH10Q8IVF4 4471 aa0.61□□□□□ -2.31
CTDSPL-203ENST00000416688 DCHS1Q96JQ0 3298 aa0.61□□□□□ -2.31
CTDSPL-203ENST00000416688 A0A096LPF7 62 aa0.61□□□□□ -2.31
CTDSPL-203ENST00000416688 FAT3Q8TDW7 4589 aa0.61□□□□□ -2.31
CTDSPL-203ENST00000416688 IGSF10Q6WRI0 2623 aa0.61□□□□□ -2.31
CTDSPL-203ENST00000416688 APOBP04114 4563 aaKnown RBP0.6□□□□□ -2.31
CTDSPL-203ENST00000416688 CMYA5Q8N3K9 4069 aa0.6□□□□□ -2.31
CTDSPL-203ENST00000416688 TEX15Q9BXT5 2789 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 295.8 ms