RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 SPRR2EP22531 72 aa8.28□□□□□ -1.08
UBXN4-202ENST00000415164 SPRR2BP35325 72 aa8.28□□□□□ -1.08
UBXN4-202ENST00000415164 SPRR2AP35326 72 aa8.28□□□□□ -1.08
UBXN4-202ENST00000415164 CYP4F30PQ9H0H9 118 aa8.26□□□□□ -1.09
UBXN4-202ENST00000415164 K7EP34 96 aa8.21□□□□□ -1.1
UBXN4-202ENST00000415164 PRO2289Q9P1D8 64 aa8.19□□□□□ -1.1
UBXN4-202ENST00000415164 NDUFC1O43677 76 aa8.18□□□□□ -1.1
UBXN4-202ENST00000415164 A8MUN3 132 aa8.16□□□□□ -1.1
UBXN4-202ENST00000415164 TRAV22A0A0B4J277 110 aa8.15□□□□□ -1.1
UBXN4-202ENST00000415164 LOC101927531A0A1B0GV80 90 aa8.15□□□□□ -1.1
UBXN4-202ENST00000415164 ADM2Q7Z4H4 148 aa8.14□□□□□ -1.11
UBXN4-202ENST00000415164 KRTAP8-1Q8IUC2 63 aa8.14□□□□□ -1.11
UBXN4-202ENST00000415164 PRO0461Q9UI25 63 aa8.13□□□□□ -1.11
UBXN4-202ENST00000415164 H0YAA0 97 aa8.11□□□□□ -1.11
UBXN4-202ENST00000415164 MT1XP80297 61 aa8.11□□□□□ -1.11
UBXN4-202ENST00000415164 PLAC4Q8WY50 150 aa8.11□□□□□ -1.11
UBXN4-202ENST00000415164 LOC105371267A0A1B0GV96 52 aa8.07□□□□□ -1.12
UBXN4-202ENST00000415164 KRTAP2-2Q9BYT5 123 aa8.05□□□□□ -1.12
UBXN4-202ENST00000415164 KRTAP2-1Q9BYU5 128 aa8.05□□□□□ -1.12
UBXN4-202ENST00000415164 LCE1AQ5T7P2 110 aa8.04□□□□□ -1.12
UBXN4-202ENST00000415164 ACYP1P07311 99 aa8.03□□□□□ -1.12
UBXN4-202ENST00000415164 SPRR2DP22532 72 aa8.02□□□□□ -1.13
UBXN4-202ENST00000415164 H0Y9P7 68 aa8.01□□□□□ -1.13
UBXN4-202ENST00000415164 COL5A1-AS1Q5SY13 56 aa8.01□□□□□ -1.13
UBXN4-202ENST00000415164 R4GN34 69 aa7.97□□□□□ -1.13
UBXN4-202ENST00000415164 ATOX1O00244 68 aa7.95□□□□□ -1.14
UBXN4-202ENST00000415164 UQCRQO14949 82 aa7.95□□□□□ -1.14
UBXN4-202ENST00000415164 ETDBQ3ZM63 59 aa7.95□□□□□ -1.14
UBXN4-202ENST00000415164 KRTAP12-2P59991 146 aa7.94□□□□□ -1.14
UBXN4-202ENST00000415164 HIST1H4AP62805 103 aaKnown RBP7.93□□□□□ -1.14
UBXN4-202ENST00000415164 KRTAP4-8A0A0G2JLE6 195 aa7.92□□□□□ -1.14
UBXN4-202ENST00000415164 KRTAP4-8Q9BYQ9 185 aa7.92□□□□□ -1.14
UBXN4-202ENST00000415164 GTF2H5Q6ZYL4 71 aa7.91□□□□□ -1.14
UBXN4-202ENST00000415164 M0QZ58 72 aa7.9□□□□□ -1.14
UBXN4-202ENST00000415164 F8W1H4 67 aa7.88□□□□□ -1.15
UBXN4-202ENST00000415164 LINC01554Q52M75 96 aa7.88□□□□□ -1.15
UBXN4-202ENST00000415164 P0C880 135 aa7.87□□□□□ -1.15
UBXN4-202ENST00000415164 LINC00208Q96KT6 92 aa7.85□□□□□ -1.15
UBXN4-202ENST00000415164 C20orf197Q8N268 126 aa7.84□□□□□ -1.15
UBXN4-202ENST00000415164 LCE3BQ5TA77 95 aa7.8□□□□□ -1.16
UBXN4-202ENST00000415164 ATP5EP2Q5VTU8 51 aa7.8□□□□□ -1.16
UBXN4-202ENST00000415164 KRTAP10-7P60409 375 aaPredicted RBP7.77□□□□□ -1.17
UBXN4-202ENST00000415164 MP68P56378 58 aa7.73□□□□□ -1.17
UBXN4-202ENST00000415164 KRTAP10-12P60413 245 aa7.66□□□□□ -1.18
UBXN4-202ENST00000415164 FAM240AA0A1B0GVK7 77 aa7.65□□□□□ -1.18
UBXN4-202ENST00000415164 MT-ATP8P03928 68 aa7.62□□□□□ -1.19
UBXN4-202ENST00000415164 GPR98Q8WXG9 6306 aa7.62□□□□□ -1.19
UBXN4-202ENST00000415164 PCP4L1A6NKN8 68 aa7.61□□□□□ -1.19
UBXN4-202ENST00000415164 OCR1Q9BZK8 76 aa7.6□□□□□ -1.19
UBXN4-202ENST00000415164 DMAC1Q96GE9 116 aa7.58□□□□□ -1.2
UBXN4-202ENST00000415164 LINC00643Q86TS7 51 aa7.56□□□□□ -1.2
UBXN4-202ENST00000415164 DSTQ03001 7570 aaKnown RBP7.52□□□□□ -1.21
UBXN4-202ENST00000415164 H3BPC8 53 aa7.48□□□□□ -1.21
UBXN4-202ENST00000415164 TRAV7A0A075B6U4 112 aa7.41□□□□□ -1.22
UBXN4-202ENST00000415164 SCGB1A1P11684 91 aa7.4□□□□□ -1.22
UBXN4-202ENST00000415164 KRTAP4-9Q9BYQ8 210 aa7.39□□□□□ -1.23
UBXN4-202ENST00000415164 SPTSSBQ8NFR3 76 aa7.38□□□□□ -1.23
UBXN4-202ENST00000415164 ACYP2P14621 99 aa7.37□□□□□ -1.23
UBXN4-202ENST00000415164 CHKB-CPT1BH3BT56 60 aa7.31□□□□□ -1.24
UBXN4-202ENST00000415164 CAMK2N1Q7Z7J9 78 aa7.31□□□□□ -1.24
UBXN4-202ENST00000415164 LCE5AQ5TCM9 118 aa7.27□□□□□ -1.25
UBXN4-202ENST00000415164 KRTAP19-7Q3SYF9 63 aa7.23□□□□□ -1.25
UBXN4-202ENST00000415164 KRTAP19-3Q7Z4W3 81 aa7.23□□□□□ -1.25
UBXN4-202ENST00000415164 A0A1B0GV90 55 aa7.22□□□□□ -1.25
UBXN4-202ENST00000415164 MT1EP04732 61 aa7.22□□□□□ -1.25
UBXN4-202ENST00000415164 KRTAP13-4Q3LI77 160 aa7.17□□□□□ -1.26
UBXN4-202ENST00000415164 CYSTM1Q9H1C7 97 aa7.14□□□□□ -1.27
UBXN4-202ENST00000415164 LCE1DQ5T752 114 aa7.13□□□□□ -1.27
UBXN4-202ENST00000415164 J3QR89 54 aa7.11□□□□□ -1.27
UBXN4-202ENST00000415164 MT4P47944 62 aa7.07□□□□□ -1.28
UBXN4-202ENST00000415164 HMCN1Q96RW7 5635 aa7.06□□□□□ -1.28
UBXN4-202ENST00000415164 A0A0D9SG42 100 aa7.04□□□□□ -1.28
UBXN4-202ENST00000415164 KRTAP19-5Q3LI72 72 aa7.02□□□□□ -1.29
UBXN4-202ENST00000415164 SNURFQ9Y675 71 aa7.01□□□□□ -1.29
UBXN4-202ENST00000415164 MT1GP13640 62 aa7□□□□□ -1.29
UBXN4-202ENST00000415164 LCE4AQ5TA78 99 aa6.99□□□□□ -1.29
UBXN4-202ENST00000415164 PP632Q6XCG6 107 aa6.99□□□□□ -1.29
UBXN4-202ENST00000415164 SMIM20Q8N5G0 67 aa6.99□□□□□ -1.29
UBXN4-202ENST00000415164 AHNAK2Q8IVF2 5795 aa6.98□□□□□ -1.29
UBXN4-202ENST00000415164 SPINT4Q6UDR6 99 aa6.95□□□□□ -1.3
UBXN4-202ENST00000415164 MT1MQ8N339 61 aa6.91□□□□□ -1.3
UBXN4-202ENST00000415164 SPATA8Q6RVD6 105 aa6.88□□□□□ -1.31
UBXN4-202ENST00000415164 SPANXA2-OT1Q8N9U9 137 aa6.87□□□□□ -1.31
UBXN4-202ENST00000415164 SEC61GP60059 68 aa6.86□□□□□ -1.31
UBXN4-202ENST00000415164 SERP1Q9Y6X1 66 aa6.86□□□□□ -1.31
UBXN4-202ENST00000415164 MT1LQ93083 61 aa6.83□□□□□ -1.32
UBXN4-202ENST00000415164 K7ERU9 68 aa6.82□□□□□ -1.32
UBXN4-202ENST00000415164 KRTAP4-3Q9BYR4 195 aa6.81□□□□□ -1.32
UBXN4-202ENST00000415164 LOC100996750A0A140TA64 210 aa6.78□□□□□ -1.32
UBXN4-202ENST00000415164 COA5Q86WW8 74 aa6.78□□□□□ -1.32
UBXN4-202ENST00000415164 KRTAP4-6Q9BYQ5 205 aa6.78□□□□□ -1.32
UBXN4-202ENST00000415164 KRTAP5-10Q6L8G5 202 aa6.76□□□□□ -1.33
UBXN4-202ENST00000415164 KRTAP12-1P59990 96 aa6.75□□□□□ -1.33
UBXN4-202ENST00000415164 A0A1B0GU33 70 aa6.74□□□□□ -1.33
UBXN4-202ENST00000415164 KRTAP5-4Q6L8H1 288 aa6.73□□□□□ -1.33
UBXN4-202ENST00000415164 C10orf95Q9H7T3 257 aa6.7□□□□□ -1.34
UBXN4-202ENST00000415164 LCE3AQ5TA76 89 aa6.68□□□□□ -1.34
UBXN4-202ENST00000415164 SERP2Q8N6R1 65 aa6.63□□□□□ -1.35
UBXN4-202ENST00000415164 TNP1P09430 55 aa6.58□□□□□ -1.36
UBXN4-202ENST00000415164 SMIM26A0A096LP01 95 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms