RNA–Protein interactions for RNA: ENST00000414069.2

SPRN-201, Transcript of shadow of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRN, Length 3,128 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRN-201ENST00000414069 FAT3Q8TDW7 4589 aa11.2□□□□□ -0.62
SPRN-201ENST00000414069 RPS29P62273 56 aaKnown RBP11.17□□□□□ -0.62
SPRN-201ENST00000414069 KRTAP17-1Q9BYP8 105 aa11.17□□□□□ -0.62
SPRN-201ENST00000414069 TNXBP22105 4242 aa11.16□□□□□ -0.62
SPRN-201ENST00000414069 SPINT4Q6UDR6 99 aa11.12□□□□□ -0.63
SPRN-201ENST00000414069 RYR1P21817 5038 aa11.12□□□□□ -0.63
SPRN-201ENST00000414069 C20orf166-AS1Q96NR2 134 aa11.11□□□□□ -0.63
SPRN-201ENST00000414069 A0A1B0GU33 70 aa11.1□□□□□ -0.63
SPRN-201ENST00000414069 EPPK1P58107 5090 aaKnown RBP11.08□□□□□ -0.64
SPRN-201ENST00000414069 KRTAP3-1Q9BYR8 98 aa11.06□□□□□ -0.64
SPRN-201ENST00000414069 NDUFAF8A1L188 74 aa11.03□□□□□ -0.64
SPRN-201ENST00000414069 LPAP08519 4548 aa10.97□□□□□ -0.65
SPRN-201ENST00000414069 KRTAP10-8P60410 259 aa10.95□□□□□ -0.66
SPRN-201ENST00000414069 K7ERS5 55 aa10.94□□□□□ -0.66
SPRN-201ENST00000414069 H1FX-AS1Q4G0G2 97 aa10.94□□□□□ -0.66
SPRN-201ENST00000414069 LRP2P98164 4655 aa10.9□□□□□ -0.66
SPRN-201ENST00000414069 C10orf95Q9H7T3 257 aa10.89□□□□□ -0.67
SPRN-201ENST00000414069 ABCA13Q86UQ4 5058 aa10.84□□□□□ -0.67
SPRN-201ENST00000414069 A0A0D9SG42 100 aa10.84□□□□□ -0.67
SPRN-201ENST00000414069 XP32Q5T750 250 aa10.82□□□□□ -0.68
SPRN-201ENST00000414069 TPRXLQ17RH7 258 aa10.8□□□□□ -0.68
SPRN-201ENST00000414069 COX6B2Q6YFQ2 88 aa10.8□□□□□ -0.68
SPRN-201ENST00000414069 MT1HL1P0DM35 61 aa10.75□□□□□ -0.69
SPRN-201ENST00000414069 RPL37P61927 97 aaKnown RBP10.73□□□□□ -0.69
SPRN-201ENST00000414069 A0A0A0MQY5 61 aa10.73□□□□□ -0.69
SPRN-201ENST00000414069 KRTAP4-5Q9BYR2 181 aa10.72□□□□□ -0.69
SPRN-201ENST00000414069 KRTAP15-1Q3LI76 137 aa10.58□□□□□ -0.72
SPRN-201ENST00000414069 KRTAP3-3Q9BYR6 98 aa10.55□□□□□ -0.72
SPRN-201ENST00000414069 KRTAP13-4Q3LI77 160 aa10.52□□□□□ -0.73
SPRN-201ENST00000414069 S4R3F8 94 aa10.51□□□□□ -0.73
SPRN-201ENST00000414069 HERC2O95714 4834 aa10.44□□□□□ -0.74
SPRN-201ENST00000414069 KRTAP10-6P60371 365 aaPredicted RBP10.4□□□□□ -0.74
SPRN-201ENST00000414069 MUC2Q02817 5179 aa10.4□□□□□ -0.75
SPRN-201ENST00000414069 KRTAP3-2Q9BYR7 98 aa10.32□□□□□ -0.76
SPRN-201ENST00000414069 J3QL48 77 aa10.29□□□□□ -0.76
SPRN-201ENST00000414069 KRTAP12-2P59991 146 aa10.24□□□□□ -0.77
SPRN-201ENST00000414069 LUZP6Q538Z0 58 aa10.24□□□□□ -0.77
SPRN-201ENST00000414069 HERC1Q15751 4861 aa10.16□□□□□ -0.78
SPRN-201ENST00000414069 KRTAP4-1Q9BYQ7 146 aa10.11□□□□□ -0.79
SPRN-201ENST00000414069 MUC17Q685J3 4493 aa10.08□□□□□ -0.8
SPRN-201ENST00000414069 PCLOQ9Y6V0 5065 aa10□□□□□ -0.81
SPRN-201ENST00000414069 SEC61BP60468 96 aaKnown RBP10□□□□□ -0.81
SPRN-201ENST00000414069 KRTAP12-1P59990 96 aa9.99□□□□□ -0.81
SPRN-201ENST00000414069 BIRC6Q9NR09 4857 aa9.95□□□□□ -0.82
SPRN-201ENST00000414069 M0QZ58 72 aa9.92□□□□□ -0.82
SPRN-201ENST00000414069 LORP23490 312 aaPredicted RBP9.89□□□□□ -0.83
SPRN-201ENST00000414069 FAT4Q6V0I7 4981 aa9.88□□□□□ -0.83
SPRN-201ENST00000414069 R4GN34 69 aa9.85□□□□□ -0.83
SPRN-201ENST00000414069 PLAC4Q8WY50 150 aa9.85□□□□□ -0.83
SPRN-201ENST00000414069 RNF213Q63HN8 5207 aa9.8□□□□□ -0.84
SPRN-201ENST00000414069 HMCN2Q8NDA2 5059 aa9.69□□□□□ -0.86
SPRN-201ENST00000414069 KRTAP19-2Q3LHN2 52 aa9.62□□□□□ -0.87
SPRN-201ENST00000414069 UBR4Q5T4S7 5183 aa9.61□□□□□ -0.87
SPRN-201ENST00000414069 FLGP20930 4061 aaPredicted RBP9.57□□□□□ -0.88
SPRN-201ENST00000414069 CAMK2N1Q7Z7J9 78 aa9.4□□□□□ -0.91
SPRN-201ENST00000414069 M0R2T5 61 aa9.34□□□□□ -0.91
SPRN-201ENST00000414069 LCE2CQ5TA81 110 aa9.21□□□□□ -0.93
SPRN-201ENST00000414069 MT1HP80294 61 aa9.03□□□□□ -0.96
SPRN-201ENST00000414069 PP632Q6XCG6 107 aa8.99□□□□□ -0.97
SPRN-201ENST00000414069 KRTAP10-10P60014 251 aa8.99□□□□□ -0.97
SPRN-201ENST00000414069 KRTAP19-1Q8IUB9 90 aa8.91□□□□□ -0.98
SPRN-201ENST00000414069 MT1FP04733 61 aa8.9□□□□□ -0.98
SPRN-201ENST00000414069 MT2AP02795 61 aa8.85□□□□□ -0.99
SPRN-201ENST00000414069 TNP1P09430 55 aa8.83□□□□□ -1
SPRN-201ENST00000414069 SPRR2GQ9BYE4 73 aa8.78□□□□□ -1
SPRN-201ENST00000414069 KRTAP9-8Q9BYQ0 159 aa8.76□□□□□ -1.01
SPRN-201ENST00000414069 USH2AO75445 5202 aa8.72□□□□□ -1.01
SPRN-201ENST00000414069 PRO2289Q9P1D8 64 aa8.71□□□□□ -1.01
SPRN-201ENST00000414069 SPRR5A0A1B0GTR4 108 aa8.64□□□□□ -1.03
SPRN-201ENST00000414069 LCE3AQ5TA76 89 aa8.51□□□□□ -1.05
SPRN-201ENST00000414069 MT1BP07438 61 aa8.47□□□□□ -1.05
SPRN-201ENST00000414069 KMT2DO14686 5537 aa8.44□□□□□ -1.06
SPRN-201ENST00000414069 KRTAP10-5P60370 271 aa8.37□□□□□ -1.07
SPRN-201ENST00000414069 MT1XP80297 61 aa8.37□□□□□ -1.07
SPRN-201ENST00000414069 KRTAP19-8Q3LI54 63 aa8.36□□□□□ -1.07
SPRN-201ENST00000414069 KRTAP9-3Q9BYQ3 159 aa8.36□□□□□ -1.07
SPRN-201ENST00000414069 FSIP2Q5CZC0 6907 aa8.34□□□□□ -1.07
SPRN-201ENST00000414069 INE1O15225 51 aa8.31□□□□□ -1.08
SPRN-201ENST00000414069 KRTAP10-7P60409 375 aaPredicted RBP8.27□□□□□ -1.09
SPRN-201ENST00000414069 KRTAP23-1A1A580 65 aa8.2□□□□□ -1.1
SPRN-201ENST00000414069 LCE2BO14633 110 aa8.2□□□□□ -1.1
SPRN-201ENST00000414069 KRTAP10-12P60413 245 aa8.17□□□□□ -1.1
SPRN-201ENST00000414069 KRTAP12-3P60328 96 aa8.04□□□□□ -1.12
SPRN-201ENST00000414069 KRTAP8-1Q8IUC2 63 aa8.03□□□□□ -1.12
SPRN-201ENST00000414069 LCE2AQ5TA79 106 aaPredicted RBP8□□□□□ -1.13
SPRN-201ENST00000414069 KRTAP4-8A0A0G2JLE6 195 aa7.95□□□□□ -1.14
SPRN-201ENST00000414069 KRTAP4-8Q9BYQ9 185 aa7.95□□□□□ -1.14
SPRN-201ENST00000414069 KRTAP19-5Q3LI72 72 aa7.85□□□□□ -1.15
SPRN-201ENST00000414069 SSPOA2VEC9 5147 aa7.81□□□□□ -1.16
SPRN-201ENST00000414069 KRTAP4-7Q9BYR0 210 aa7.58□□□□□ -1.2
SPRN-201ENST00000414069 MUC12Q9UKN1 5478 aa7.5□□□□□ -1.21
SPRN-201ENST00000414069 LCE3CQ5T5A8 94 aa7.49□□□□□ -1.21
SPRN-201ENST00000414069 FCGBPQ9Y6R7 5405 aaPredicted RBP7.48□□□□□ -1.21
SPRN-201ENST00000414069 KRTAP19-7Q3SYF9 63 aa7.45□□□□□ -1.22
SPRN-201ENST00000414069 DSTQ03001 7570 aaKnown RBP7.42□□□□□ -1.22
SPRN-201ENST00000414069 KRTAP9-6A8MVA2 160 aa7.36□□□□□ -1.23
SPRN-201ENST00000414069 MT1EP04732 61 aa7.23□□□□□ -1.25
SPRN-201ENST00000414069 MT1LQ93083 61 aa7.2□□□□□ -1.26
SPRN-201ENST00000414069 KRTAP19-6Q3LI70 58 aa7.18□□□□□ -1.26
SPRN-201ENST00000414069 KRTAP4-3Q9BYR4 195 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms