RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 SPRR2GQ9BYE4 73 aa11.81□□□□□ -0.52
VEGFA-207ENST00000413642 KLKP1Q107X0 134 aa11.79□□□□□ -0.52
VEGFA-207ENST00000413642 KRTAP19-8Q3LI54 63 aa11.76□□□□□ -0.53
VEGFA-207ENST00000413642 Q5VV11 94 aa11.74□□□□□ -0.53
VEGFA-207ENST00000413642 LINC00208Q96KT6 92 aa11.72□□□□□ -0.53
VEGFA-207ENST00000413642 OCR1Q9BZK8 76 aa11.69□□□□□ -0.54
VEGFA-207ENST00000413642 NDUFC1O43677 76 aa11.64□□□□□ -0.55
VEGFA-207ENST00000413642 A6NN06 94 aa11.63□□□□□ -0.55
VEGFA-207ENST00000413642 IMUPQ9GZP8 106 aa11.61□□□□□ -0.55
VEGFA-207ENST00000413642 MP68P56378 58 aa11.6□□□□□ -0.55
VEGFA-207ENST00000413642 A8MUN3 132 aa11.57□□□□□ -0.56
VEGFA-207ENST00000413642 KRTAP6-3Q3LI67 103 aa11.56□□□□□ -0.56
VEGFA-207ENST00000413642 CRIPTQ9P021 101 aa11.56□□□□□ -0.56
VEGFA-207ENST00000413642 J3QR89 54 aa11.52□□□□□ -0.57
VEGFA-207ENST00000413642 H0YAA0 97 aa11.51□□□□□ -0.57
VEGFA-207ENST00000413642 KRTAP10-5P60370 271 aa11.5□□□□□ -0.57
VEGFA-207ENST00000413642 ADM2Q7Z4H4 148 aa11.47□□□□□ -0.57
VEGFA-207ENST00000413642 SCGB1A1P11684 91 aa11.41□□□□□ -0.58
VEGFA-207ENST00000413642 H3BPC8 53 aa11.4□□□□□ -0.58
VEGFA-207ENST00000413642 DMAC1Q96GE9 116 aa11.31□□□□□ -0.6
VEGFA-207ENST00000413642 MT-ATP8P03928 68 aa11.26□□□□□ -0.61
VEGFA-207ENST00000413642 P0C880 135 aa11.25□□□□□ -0.61
VEGFA-207ENST00000413642 KRTAP3-2Q9BYR7 98 aa11.16□□□□□ -0.62
VEGFA-207ENST00000413642 NEBP20929 6669 aa11.16□□□□□ -0.62
VEGFA-207ENST00000413642 R4GN34 69 aa11.13□□□□□ -0.63
VEGFA-207ENST00000413642 K7ERU9 68 aa11.1□□□□□ -0.63
VEGFA-207ENST00000413642 TRAV7A0A075B6U4 112 aa11.09□□□□□ -0.63
VEGFA-207ENST00000413642 M0QZ58 72 aa11.08□□□□□ -0.64
VEGFA-207ENST00000413642 MT1XP80297 61 aa11.08□□□□□ -0.64
VEGFA-207ENST00000413642 C20orf197Q8N268 126 aa11.08□□□□□ -0.64
VEGFA-207ENST00000413642 PLAC4Q8WY50 150 aa11.06□□□□□ -0.64
VEGFA-207ENST00000413642 SMIM20Q8N5G0 67 aa11.04□□□□□ -0.64
VEGFA-207ENST00000413642 MUC12Q9UKN1 5478 aa11.04□□□□□ -0.64
VEGFA-207ENST00000413642 KRTAP5-9P26371 169 aa11.03□□□□□ -0.64
VEGFA-207ENST00000413642 ACYP2P14621 99 aa11.02□□□□□ -0.65
VEGFA-207ENST00000413642 PRO2289Q9P1D8 64 aa10.99□□□□□ -0.65
VEGFA-207ENST00000413642 LINC01554Q52M75 96 aa10.95□□□□□ -0.66
VEGFA-207ENST00000413642 SNURFQ9Y675 71 aa10.94□□□□□ -0.66
VEGFA-207ENST00000413642 KMT2DO14686 5537 aa10.89□□□□□ -0.67
VEGFA-207ENST00000413642 SPTSSBQ8NFR3 76 aa10.84□□□□□ -0.67
VEGFA-207ENST00000413642 CHKB-CPT1BH3BT56 60 aa10.83□□□□□ -0.68
VEGFA-207ENST00000413642 SPRR2FQ96RM1 72 aa10.74□□□□□ -0.69
VEGFA-207ENST00000413642 MDN1Q9NU22 5596 aa10.74□□□□□ -0.69
VEGFA-207ENST00000413642 KRTAP12-2P59991 146 aa10.73□□□□□ -0.69
VEGFA-207ENST00000413642 SERP2Q8N6R1 65 aa10.72□□□□□ -0.69
VEGFA-207ENST00000413642 KRTAP20-1Q3LI63 56 aa10.7□□□□□ -0.7
VEGFA-207ENST00000413642 SPANXA2-OT1Q8N9U9 137 aa10.7□□□□□ -0.7
VEGFA-207ENST00000413642 KRTAP8-1Q8IUC2 63 aa10.69□□□□□ -0.7
VEGFA-207ENST00000413642 KRTAP4-8A0A0G2JLE6 195 aa10.65□□□□□ -0.7
VEGFA-207ENST00000413642 KRTAP4-8Q9BYQ9 185 aa10.65□□□□□ -0.7
VEGFA-207ENST00000413642 KRTAP10-7P60409 375 aaPredicted RBP10.6□□□□□ -0.71
VEGFA-207ENST00000413642 SPRR2EP22531 72 aa10.58□□□□□ -0.72
VEGFA-207ENST00000413642 SPRR2BP35325 72 aa10.58□□□□□ -0.72
VEGFA-207ENST00000413642 SPRR2AP35326 72 aa10.58□□□□□ -0.72
VEGFA-207ENST00000413642 KRTAP13-4Q3LI77 160 aa10.53□□□□□ -0.72
VEGFA-207ENST00000413642 KRTAP10-12P60413 245 aa10.49□□□□□ -0.73
VEGFA-207ENST00000413642 COA5Q86WW8 74 aa10.46□□□□□ -0.73
VEGFA-207ENST00000413642 LCE1AQ5T7P2 110 aa10.45□□□□□ -0.74
VEGFA-207ENST00000413642 KRTAP2-3P0C7H8 128 aa10.42□□□□□ -0.74
VEGFA-207ENST00000413642 KRTAP2-4Q9BYR9 128 aa10.42□□□□□ -0.74
VEGFA-207ENST00000413642 COX7CP15954 63 aa10.39□□□□□ -0.75
VEGFA-207ENST00000413642 CYSTM1Q9H1C7 97 aa10.34□□□□□ -0.75
VEGFA-207ENST00000413642 H7BZZ5 65 aa10.25□□□□□ -0.77
VEGFA-207ENST00000413642 CAMK2N1Q7Z7J9 78 aa10.25□□□□□ -0.77
VEGFA-207ENST00000413642 SPRR2DP22532 72 aa10.22□□□□□ -0.77
VEGFA-207ENST00000413642 SERP1Q9Y6X1 66 aa10.21□□□□□ -0.77
VEGFA-207ENST00000413642 SEC61GP60059 68 aa10.2□□□□□ -0.78
VEGFA-207ENST00000413642 A0A0D9SG42 100 aa10.19□□□□□ -0.78
VEGFA-207ENST00000413642 SPATA8Q6RVD6 105 aa10.18□□□□□ -0.78
VEGFA-207ENST00000413642 A0A1B0GU33 70 aa10.09□□□□□ -0.79
VEGFA-207ENST00000413642 KRTAP2-2Q9BYT5 123 aa10.09□□□□□ -0.79
VEGFA-207ENST00000413642 KRTAP2-1Q9BYU5 128 aa10.09□□□□□ -0.79
VEGFA-207ENST00000413642 SPINT4Q6UDR6 99 aa10.03□□□□□ -0.8
VEGFA-207ENST00000413642 ANAPC13Q9BS18 74 aa10.01□□□□□ -0.81
VEGFA-207ENST00000413642 KRTAP12-1P59990 96 aa9.96□□□□□ -0.82
VEGFA-207ENST00000413642 LCE3BQ5TA77 95 aa9.93□□□□□ -0.82
VEGFA-207ENST00000413642 KRTAP19-7Q3SYF9 63 aa9.91□□□□□ -0.82
VEGFA-207ENST00000413642 A0A1B0GU69 56 aa9.9□□□□□ -0.82
VEGFA-207ENST00000413642 CCDC179H3BU77 68 aa9.89□□□□□ -0.83
VEGFA-207ENST00000413642 A8MU10 97 aa9.82□□□□□ -0.84
VEGFA-207ENST00000413642 MT1EP04732 61 aa9.81□□□□□ -0.84
VEGFA-207ENST00000413642 SMIM26A0A096LP01 95 aa9.76□□□□□ -0.85
VEGFA-207ENST00000413642 LCE5AQ5TCM9 118 aa9.72□□□□□ -0.85
VEGFA-207ENST00000413642 KRTAP19-3Q7Z4W3 81 aa9.7□□□□□ -0.86
VEGFA-207ENST00000413642 KRTAP19-5Q3LI72 72 aa9.68□□□□□ -0.86
VEGFA-207ENST00000413642 ATP5EP56381 51 aaPredicted RBP9.62□□□□□ -0.87
VEGFA-207ENST00000413642 C10orf95Q9H7T3 257 aa9.56□□□□□ -0.88
VEGFA-207ENST00000413642 PRR15LQ9BU68 103 aa9.54□□□□□ -0.88
VEGFA-207ENST00000413642 LINC01558Q9Y6Z2 57 aa9.53□□□□□ -0.88
VEGFA-207ENST00000413642 PCP4P48539 62 aa9.49□□□□□ -0.89
VEGFA-207ENST00000413642 DSTQ03001 7570 aaKnown RBP9.48□□□□□ -0.89
VEGFA-207ENST00000413642 LCE3AQ5TA76 89 aa9.46□□□□□ -0.9
VEGFA-207ENST00000413642 MT1GP13640 62 aa9.45□□□□□ -0.9
VEGFA-207ENST00000413642 TNP1P09430 55 aa9.43□□□□□ -0.9
VEGFA-207ENST00000413642 TMEM258P61165 79 aa9.4□□□□□ -0.9
VEGFA-207ENST00000413642 MT1LQ93083 61 aa9.38□□□□□ -0.91
VEGFA-207ENST00000413642 MT1MQ8N339 61 aa9.34□□□□□ -0.91
VEGFA-207ENST00000413642 PP632Q6XCG6 107 aa9.33□□□□□ -0.92
VEGFA-207ENST00000413642 KRTAP4-9Q9BYQ8 210 aa9.31□□□□□ -0.92
VEGFA-207ENST00000413642 UQCR11O14957 56 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 545 ms