RNA–Protein interactions for RNA: ENST00000412962.4

CROCCP2-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

BASIC

Gene CROCCP2, Length 2,773 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-202ENST00000412962 MIR22HGQ0VDD5 57 aa9.47□□□□□ -0.89
CROCCP2-202ENST00000412962 MYCBP2O75592 4640 aa9.44□□□□□ -0.9
CROCCP2-202ENST00000412962 DMBT1Q9UGM3 2413 aaPredicted RBP9.43□□□□□ -0.9
CROCCP2-202ENST00000412962 MT1HL1P0DM35 61 aa9.39□□□□□ -0.91
CROCCP2-202ENST00000412962 UQCR11O14957 56 aa9.37□□□□□ -0.91
CROCCP2-202ENST00000412962 ROMO1P60602 79 aa9.28□□□□□ -0.92
CROCCP2-202ENST00000412962 XP32Q5T750 250 aa9.27□□□□□ -0.93
CROCCP2-202ENST00000412962 RPL37P61927 97 aaKnown RBP9.26□□□□□ -0.93
CROCCP2-202ENST00000412962 KRTAP3-1Q9BYR8 98 aa9.23□□□□□ -0.93
CROCCP2-202ENST00000412962 KRTAP4-5Q9BYR2 181 aa9.22□□□□□ -0.93
CROCCP2-202ENST00000412962 CRIPTQ9P021 101 aa9.18□□□□□ -0.94
CROCCP2-202ENST00000412962 COX6B2Q6YFQ2 88 aa9.14□□□□□ -0.95
CROCCP2-202ENST00000412962 LPAP08519 4548 aa9.12□□□□□ -0.95
CROCCP2-202ENST00000412962 KRTAP25-1Q3LHN0 102 aa9.12□□□□□ -0.95
CROCCP2-202ENST00000412962 P0C880 135 aa9.11□□□□□ -0.95
CROCCP2-202ENST00000412962 TPRXLQ17RH7 258 aa9.07□□□□□ -0.96
CROCCP2-202ENST00000412962 ABCA13Q86UQ4 5058 aa9.06□□□□□ -0.96
CROCCP2-202ENST00000412962 H0YAA0 97 aa9.06□□□□□ -0.96
CROCCP2-202ENST00000412962 LRP2P98164 4655 aa9□□□□□ -0.97
CROCCP2-202ENST00000412962 HERC2O95714 4834 aa8.93□□□□□ -0.98
CROCCP2-202ENST00000412962 J3QL48 77 aa8.92□□□□□ -0.98
CROCCP2-202ENST00000412962 BIRC6Q9NR09 4857 aa8.9□□□□□ -0.98
CROCCP2-202ENST00000412962 A0A1B0GU33 70 aa8.87□□□□□ -0.99
CROCCP2-202ENST00000412962 NDUFAF8A1L188 74 aa8.87□□□□□ -0.99
CROCCP2-202ENST00000412962 KRTAP3-3Q9BYR6 98 aa8.86□□□□□ -0.99
CROCCP2-202ENST00000412962 S4R3F8 94 aa8.85□□□□□ -0.99
CROCCP2-202ENST00000412962 H1FX-AS1Q4G0G2 97 aa8.82□□□□□ -1
CROCCP2-202ENST00000412962 SEC61BP60468 96 aaKnown RBP8.74□□□□□ -1.01
CROCCP2-202ENST00000412962 SPINT4Q6UDR6 99 aa8.72□□□□□ -1.01
CROCCP2-202ENST00000412962 LUZP6Q538Z0 58 aa8.68□□□□□ -1.02
CROCCP2-202ENST00000412962 KRTAP10-6P60371 365 aaPredicted RBP8.67□□□□□ -1.02
CROCCP2-202ENST00000412962 C10orf95Q9H7T3 257 aa8.65□□□□□ -1.03
CROCCP2-202ENST00000412962 KRTAP3-2Q9BYR7 98 aa8.64□□□□□ -1.03
CROCCP2-202ENST00000412962 MUC17Q685J3 4493 aa8.64□□□□□ -1.03
CROCCP2-202ENST00000412962 KRTAP4-1Q9BYQ7 146 aa8.61□□□□□ -1.03
CROCCP2-202ENST00000412962 KRTAP13-4Q3LI77 160 aa8.6□□□□□ -1.03
CROCCP2-202ENST00000412962 K7ERS5 55 aa8.59□□□□□ -1.03
CROCCP2-202ENST00000412962 PCLOQ9Y6V0 5065 aa8.56□□□□□ -1.04
CROCCP2-202ENST00000412962 MUC2Q02817 5179 aa8.56□□□□□ -1.04
CROCCP2-202ENST00000412962 A0A0D9SG42 100 aa8.56□□□□□ -1.04
CROCCP2-202ENST00000412962 HERC1Q15751 4861 aa8.5□□□□□ -1.05
CROCCP2-202ENST00000412962 KRTAP15-1Q3LI76 137 aa8.49□□□□□ -1.05
CROCCP2-202ENST00000412962 HMCN2Q8NDA2 5059 aa8.42□□□□□ -1.06
CROCCP2-202ENST00000412962 KRTAP19-2Q3LHN2 52 aa8.41□□□□□ -1.06
CROCCP2-202ENST00000412962 M0QZ58 72 aa8.29□□□□□ -1.08
CROCCP2-202ENST00000412962 KRTAP12-2P59991 146 aa8.25□□□□□ -1.09
CROCCP2-202ENST00000412962 FLGP20930 4061 aaPredicted RBP8.23□□□□□ -1.09
CROCCP2-202ENST00000412962 KRTAP12-1P59990 96 aa8.2□□□□□ -1.1
CROCCP2-202ENST00000412962 R4GN34 69 aa8.19□□□□□ -1.1
CROCCP2-202ENST00000412962 LORP23490 312 aaPredicted RBP8.16□□□□□ -1.1
CROCCP2-202ENST00000412962 FAT4Q6V0I7 4981 aa8.12□□□□□ -1.11
CROCCP2-202ENST00000412962 LCE2CQ5TA81 110 aa8.06□□□□□ -1.12
CROCCP2-202ENST00000412962 UBR4Q5T4S7 5183 aa8.05□□□□□ -1.12
CROCCP2-202ENST00000412962 RNF213Q63HN8 5207 aa8.02□□□□□ -1.12
CROCCP2-202ENST00000412962 MT1HP80294 61 aa7.88□□□□□ -1.15
CROCCP2-202ENST00000412962 M0R2T5 61 aa7.87□□□□□ -1.15
CROCCP2-202ENST00000412962 PLAC4Q8WY50 150 aa7.81□□□□□ -1.16
CROCCP2-202ENST00000412962 CAMK2N1Q7Z7J9 78 aa7.73□□□□□ -1.17
CROCCP2-202ENST00000412962 MT2AP02795 61 aa7.66□□□□□ -1.18
CROCCP2-202ENST00000412962 SPRR2GQ9BYE4 73 aa7.66□□□□□ -1.18
CROCCP2-202ENST00000412962 MT1FP04733 61 aa7.65□□□□□ -1.19
CROCCP2-202ENST00000412962 KRTAP19-1Q8IUB9 90 aa7.64□□□□□ -1.19
CROCCP2-202ENST00000412962 KRTAP9-8Q9BYQ0 159 aa7.64□□□□□ -1.19
CROCCP2-202ENST00000412962 KRTAP10-10P60014 251 aa7.63□□□□□ -1.19
CROCCP2-202ENST00000412962 PP632Q6XCG6 107 aa7.4□□□□□ -1.22
CROCCP2-202ENST00000412962 KRTAP19-8Q3LI54 63 aa7.39□□□□□ -1.23
CROCCP2-202ENST00000412962 TNP1P09430 55 aa7.38□□□□□ -1.23
CROCCP2-202ENST00000412962 KRTAP9-3Q9BYQ3 159 aa7.34□□□□□ -1.23
CROCCP2-202ENST00000412962 MT1BP07438 61 aa7.31□□□□□ -1.24
CROCCP2-202ENST00000412962 PRO2289Q9P1D8 64 aa7.3□□□□□ -1.24
CROCCP2-202ENST00000412962 LCE2AQ5TA79 106 aaPredicted RBP7.25□□□□□ -1.25
CROCCP2-202ENST00000412962 KRTAP23-1A1A580 65 aa7.2□□□□□ -1.26
CROCCP2-202ENST00000412962 MT1XP80297 61 aa7.17□□□□□ -1.26
CROCCP2-202ENST00000412962 KRTAP10-5P60370 271 aa7.16□□□□□ -1.26
CROCCP2-202ENST00000412962 USH2AO75445 5202 aa7.15□□□□□ -1.27
CROCCP2-202ENST00000412962 LCE2BO14633 110 aa7.1□□□□□ -1.27
CROCCP2-202ENST00000412962 LCE3AQ5TA76 89 aa7.05□□□□□ -1.28
CROCCP2-202ENST00000412962 SPRR5A0A1B0GTR4 108 aa7.03□□□□□ -1.28
CROCCP2-202ENST00000412962 KMT2DO14686 5537 aa6.95□□□□□ -1.3
CROCCP2-202ENST00000412962 KRTAP10-7P60409 375 aaPredicted RBP6.93□□□□□ -1.3
CROCCP2-202ENST00000412962 KRTAP10-12P60413 245 aa6.92□□□□□ -1.3
CROCCP2-202ENST00000412962 KRTAP8-1Q8IUC2 63 aa6.86□□□□□ -1.31
CROCCP2-202ENST00000412962 INE1O15225 51 aa6.8□□□□□ -1.32
CROCCP2-202ENST00000412962 KRTAP12-3P60328 96 aa6.74□□□□□ -1.33
CROCCP2-202ENST00000412962 FSIP2Q5CZC0 6907 aa6.7□□□□□ -1.34
CROCCP2-202ENST00000412962 SSPOA2VEC9 5147 aa6.62□□□□□ -1.35
CROCCP2-202ENST00000412962 KRTAP4-8A0A0G2JLE6 195 aa6.58□□□□□ -1.36
CROCCP2-202ENST00000412962 KRTAP4-8Q9BYQ9 185 aa6.58□□□□□ -1.36
CROCCP2-202ENST00000412962 KRTAP19-5Q3LI72 72 aa6.58□□□□□ -1.36
CROCCP2-202ENST00000412962 KRTAP19-6Q3LI70 58 aa6.51□□□□□ -1.37
CROCCP2-202ENST00000412962 KRTAP19-7Q3SYF9 63 aa6.39□□□□□ -1.39
CROCCP2-202ENST00000412962 LCE2DQ5TA82 110 aaPredicted RBP6.38□□□□□ -1.39
CROCCP2-202ENST00000412962 LCE3CQ5T5A8 94 aa6.31□□□□□ -1.4
CROCCP2-202ENST00000412962 KRTAP4-7Q9BYR0 210 aa6.25□□□□□ -1.41
CROCCP2-202ENST00000412962 MT1EP04732 61 aa6.24□□□□□ -1.41
CROCCP2-202ENST00000412962 FCGBPQ9Y6R7 5405 aaPredicted RBP6.22□□□□□ -1.41
CROCCP2-202ENST00000412962 MT1LQ93083 61 aa6.18□□□□□ -1.42
CROCCP2-202ENST00000412962 KRTAP9-6A8MVA2 160 aa6.13□□□□□ -1.43
CROCCP2-202ENST00000412962 MUC12Q9UKN1 5478 aa6.13□□□□□ -1.43
CROCCP2-202ENST00000412962 KRTAP19-4Q3LI73 84 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms