RNA–Protein interactions for RNA: ENST00000411788.5

SEMA3C-202, Transcript of semaphorin 3C, humanhuman

TSL 5

Gene SEMA3C, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-202ENST00000411788 DNAH2Q9P225 4427 aa1.75□□□□□ -2.13
SEMA3C-202ENST00000411788 CMYA5Q8N3K9 4069 aa1.75□□□□□ -2.13
SEMA3C-202ENST00000411788 DMBT1Q9UGM3 2413 aaPredicted RBP1.75□□□□□ -2.13
SEMA3C-202ENST00000411788 COL7A1Q02388 2944 aa1.74□□□□□ -2.13
SEMA3C-202ENST00000411788 USP9XQ93008 2570 aaPredicted RBP1.74□□□□□ -2.13
SEMA3C-202ENST00000411788 TTC28Q96AY4 2481 aa1.74□□□□□ -2.13
SEMA3C-202ENST00000411788 USP9YO00507 2555 aaPredicted RBP1.74□□□□□ -2.13
SEMA3C-202ENST00000411788 SVEP1Q4LDE5 3571 aa1.74□□□□□ -2.13
SEMA3C-202ENST00000411788 NBEAL2Q6ZNJ1 2754 aa1.73□□□□□ -2.13
SEMA3C-202ENST00000411788 PRKDCP78527 4128 aaKnown RBP1.73□□□□□ -2.13
SEMA3C-202ENST00000411788 TENM4Q6N022 2769 aa1.73□□□□□ -2.13
SEMA3C-202ENST00000411788 LYSTQ99698 3801 aa1.72□□□□□ -2.13
SEMA3C-202ENST00000411788 EPG5Q9HCE0 2579 aa1.72□□□□□ -2.13
SEMA3C-202ENST00000411788 CHD8Q9HCK8 2581 aa1.72□□□□□ -2.13
SEMA3C-202ENST00000411788 LRRK2Q5S007 2527 aa1.72□□□□□ -2.13
SEMA3C-202ENST00000411788 CSMD3Q7Z407 3707 aa1.72□□□□□ -2.13
SEMA3C-202ENST00000411788 ZFYVE26Q68DK2 2539 aa1.72□□□□□ -2.13
SEMA3C-202ENST00000411788 DNAH6Q9C0G6 4158 aa1.72□□□□□ -2.13
SEMA3C-202ENST00000411788 TGP01266 2768 aa1.71□□□□□ -2.14
SEMA3C-202ENST00000411788 J3QKU1 62 aa1.71□□□□□ -2.14
SEMA3C-202ENST00000411788 DNAH10Q8IVF4 4471 aa1.71□□□□□ -2.14
SEMA3C-202ENST00000411788 DNAH9Q9NYC9 4486 aa1.71□□□□□ -2.14
SEMA3C-202ENST00000411788 DNAH3Q8TD57 4116 aa1.71□□□□□ -2.14
SEMA3C-202ENST00000411788 VPS13CQ709C8 3753 aa1.71□□□□□ -2.14
SEMA3C-202ENST00000411788 SETD2Q9BYW2 2564 aaPredicted RBP1.71□□□□□ -2.14
SEMA3C-202ENST00000411788 HUWE1Q7Z6Z7 4374 aaKnown RBP1.71□□□□□ -2.14
SEMA3C-202ENST00000411788 DNAH17Q9UFH2 4485 aa1.7□□□□□ -2.14
SEMA3C-202ENST00000411788 ACACBO00763 2458 aa1.7□□□□□ -2.14
SEMA3C-202ENST00000411788 SACSQ9NZJ4 4579 aa1.7□□□□□ -2.14
SEMA3C-202ENST00000411788 ITPR3Q14573 2671 aa1.69□□□□□ -2.14
SEMA3C-202ENST00000411788 PIEZO1Q92508 2521 aa1.69□□□□□ -2.14
SEMA3C-202ENST00000411788 DNAH7Q8WXX0 4024 aa1.69□□□□□ -2.14
SEMA3C-202ENST00000411788 ZANQ9Y493 2812 aa1.69□□□□□ -2.14
SEMA3C-202ENST00000411788 UNC79Q9P2D8 2635 aa1.69□□□□□ -2.14
SEMA3C-202ENST00000411788 CFAP46Q8IYW2 2715 aa1.68□□□□□ -2.14
SEMA3C-202ENST00000411788 MTORP42345 2549 aa1.68□□□□□ -2.14
SEMA3C-202ENST00000411788 FBN2P35556 2912 aa1.68□□□□□ -2.14
SEMA3C-202ENST00000411788 PDZD2O15018 2839 aa1.67□□□□□ -2.14
SEMA3C-202ENST00000411788 ABCA12Q86UK0 2595 aa1.67□□□□□ -2.14
SEMA3C-202ENST00000411788 MYO18BQ8IUG5 2567 aa1.67□□□□□ -2.14
SEMA3C-202ENST00000411788 MUC3AQ02505 3323 aa1.67□□□□□ -2.14
SEMA3C-202ENST00000411788 CACNA1AO00555 2505 aa1.67□□□□□ -2.14
SEMA3C-202ENST00000411788 FLNAP21333 2647 aaKnown RBP1.67□□□□□ -2.14
SEMA3C-202ENST00000411788 HECTD1Q9ULT8 2610 aa1.67□□□□□ -2.14
SEMA3C-202ENST00000411788 CSMD2Q7Z408 3487 aa1.67□□□□□ -2.14
SEMA3C-202ENST00000411788 HIVEP1P15822 2718 aa1.65□□□□□ -2.15
SEMA3C-202ENST00000411788 CUBNO60494 3623 aa1.65□□□□□ -2.15
SEMA3C-202ENST00000411788 POLQO75417 2590 aa1.64□□□□□ -2.15
SEMA3C-202ENST00000411788 HECTD4Q9Y4D8 3996 aa1.64□□□□□ -2.15
SEMA3C-202ENST00000411788 FLNCQ14315 2725 aa1.64□□□□□ -2.15
SEMA3C-202ENST00000411788 HELZ2Q9BYK8 2649 aaKnown RBP1.63□□□□□ -2.15
SEMA3C-202ENST00000411788 APOBP04114 4563 aaKnown RBP1.63□□□□□ -2.15
SEMA3C-202ENST00000411788 PKD1P98161 4303 aa1.63□□□□□ -2.15
SEMA3C-202ENST00000411788 ACANP16112 2415 aa1.63□□□□□ -2.15
SEMA3C-202ENST00000411788 VPS13BQ7Z7G8 4022 aa1.62□□□□□ -2.15
SEMA3C-202ENST00000411788 KMT2AQ03164 3969 aa1.62□□□□□ -2.15
SEMA3C-202ENST00000411788 FLGP20930 4061 aaPredicted RBP1.61□□□□□ -2.15
SEMA3C-202ENST00000411788 IGSF10Q6WRI0 2623 aa1.61□□□□□ -2.15
SEMA3C-202ENST00000411788 TEP1Q99973 2627 aaKnown RBP1.61□□□□□ -2.15
SEMA3C-202ENST00000411788 M0R2T5 61 aa1.61□□□□□ -2.15
SEMA3C-202ENST00000411788 KRTAP8-1Q8IUC2 63 aa1.61□□□□□ -2.15
SEMA3C-202ENST00000411788 LCE3DQ9BYE3 92 aa1.61□□□□□ -2.15
SEMA3C-202ENST00000411788 STAB2Q8WWQ8 2551 aa1.6□□□□□ -2.15
SEMA3C-202ENST00000411788 MAST4O15021 2626 aa1.59□□□□□ -2.15
SEMA3C-202ENST00000411788 NBEAL1Q6ZS30 2694 aa1.59□□□□□ -2.15
SEMA3C-202ENST00000411788 HSPG2P98160 4391 aa1.59□□□□□ -2.16
SEMA3C-202ENST00000411788 USP24Q9UPU5 2620 aa1.59□□□□□ -2.16
SEMA3C-202ENST00000411788 FASNP49327 2511 aaKnown RBP1.59□□□□□ -2.16
SEMA3C-202ENST00000411788 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
SEMA3C-202ENST00000411788 FBN3Q75N90 2809 aa1.58□□□□□ -2.16
SEMA3C-202ENST00000411788 FAT3Q8TDW7 4589 aa1.58□□□□□ -2.16
SEMA3C-202ENST00000411788 ZNF469Q96JG9 3925 aaPredicted RBP1.58□□□□□ -2.16
SEMA3C-202ENST00000411788 PKD1L1Q8TDX9 2849 aa1.58□□□□□ -2.16
SEMA3C-202ENST00000411788 ATRQ13535 2644 aa1.57□□□□□ -2.16
SEMA3C-202ENST00000411788 KRTAP2-3P0C7H8 128 aa1.57□□□□□ -2.16
SEMA3C-202ENST00000411788 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
SEMA3C-202ENST00000411788 KRTAP2-4Q9BYR9 128 aa1.57□□□□□ -2.16
SEMA3C-202ENST00000411788 KRTAP2-1Q9BYU5 128 aa1.57□□□□□ -2.16
SEMA3C-202ENST00000411788 NOTCH1P46531 2555 aa1.57□□□□□ -2.16
SEMA3C-202ENST00000411788 DNAH5Q8TE73 4624 aa1.57□□□□□ -2.16
SEMA3C-202ENST00000411788 PKHD1L1Q86WI1 4243 aa1.57□□□□□ -2.16
SEMA3C-202ENST00000411788 KRTAP12-4P60329 112 aa1.56□□□□□ -2.16
SEMA3C-202ENST00000411788 NSD1Q96L73 2696 aaPredicted RBP1.55□□□□□ -2.16
SEMA3C-202ENST00000411788 FLNBO75369 2602 aaKnown RBP1.54□□□□□ -2.16
SEMA3C-202ENST00000411788 TENM3Q9P273 2699 aa1.54□□□□□ -2.16
SEMA3C-202ENST00000411788 ITPR2Q14571 2701 aa1.54□□□□□ -2.16
SEMA3C-202ENST00000411788 KRTAP6-3Q3LI67 103 aa1.54□□□□□ -2.16
SEMA3C-202ENST00000411788 TENM1Q9UKZ4 2725 aa1.53□□□□□ -2.16
SEMA3C-202ENST00000411788 LRP1Q07954 4544 aaKnown RBP1.52□□□□□ -2.17
SEMA3C-202ENST00000411788 KRTAP10-4P60372 401 aaPredicted RBP1.52□□□□□ -2.17
SEMA3C-202ENST00000411788 PLECQ15149 4684 aaKnown RBP1.51□□□□□ -2.17
SEMA3C-202ENST00000411788 KRTAP12-3P60328 96 aa1.51□□□□□ -2.17
SEMA3C-202ENST00000411788 FAT2Q9NYQ8 4349 aa1.51□□□□□ -2.17
SEMA3C-202ENST00000411788 DYNC1H1Q14204 4646 aaKnown RBP1.49□□□□□ -2.17
SEMA3C-202ENST00000411788 TNXBP22105 4242 aa1.48□□□□□ -2.17
SEMA3C-202ENST00000411788 MGAM2Q2M2H8 2515 aa1.47□□□□□ -2.17
SEMA3C-202ENST00000411788 STARD9Q9P2P6 4700 aa1.47□□□□□ -2.17
SEMA3C-202ENST00000411788 PKHD1P08F94 4074 aa1.46□□□□□ -2.18
SEMA3C-202ENST00000411788 SMR3BP02814 79 aaPredicted RBP1.45□□□□□ -2.18
SEMA3C-202ENST00000411788 STAB1Q9NY15 2570 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms