RNA–Protein interactions for RNA: ENST00000409583.5

ITGB6-202, Transcript of integrin subunit beta 6, humanhuman

TSL 3

Gene ITGB6, Length 4,500 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB6-202ENST00000409583 PRKDCP78527 4128 aaKnown RBP4.37□□□□□ -1.71
ITGB6-202ENST00000409583 KRTAP10-6P60371 365 aaPredicted RBP4.36□□□□□ -1.71
ITGB6-202ENST00000409583 FAT1Q14517 4588 aa4.36□□□□□ -1.71
ITGB6-202ENST00000409583 DNAH10Q8IVF4 4471 aa4.34□□□□□ -1.71
ITGB6-202ENST00000409583 STARD9Q9P2P6 4700 aa4.34□□□□□ -1.71
ITGB6-202ENST00000409583 DNAH1Q9P2D7 4330 aa4.34□□□□□ -1.71
ITGB6-202ENST00000409583 RYR1P21817 5038 aa4.31□□□□□ -1.72
ITGB6-202ENST00000409583 KIAA1109Q2LD37 5005 aa4.28□□□□□ -1.72
ITGB6-202ENST00000409583 DNAH3Q8TD57 4116 aa4.27□□□□□ -1.73
ITGB6-202ENST00000409583 DYNC1H1Q14204 4646 aaKnown RBP4.27□□□□□ -1.73
ITGB6-202ENST00000409583 VPS13DQ5THJ4 4388 aa4.24□□□□□ -1.73
ITGB6-202ENST00000409583 LRP1BQ9NZR2 4599 aa4.23□□□□□ -1.73
ITGB6-202ENST00000409583 LYSTQ99698 3801 aa4.22□□□□□ -1.73
ITGB6-202ENST00000409583 ALMS1Q8TCU4 4167 aa4.22□□□□□ -1.73
ITGB6-202ENST00000409583 KMT2AQ03164 3969 aa4.2□□□□□ -1.74
ITGB6-202ENST00000409583 KRTAP3-3Q9BYR6 98 aa4.19□□□□□ -1.74
ITGB6-202ENST00000409583 CMYA5Q8N3K9 4069 aa4.19□□□□□ -1.74
ITGB6-202ENST00000409583 KRTAP23-1A1A580 65 aa4.19□□□□□ -1.74
ITGB6-202ENST00000409583 KRTAP3-2Q9BYR7 98 aa4.19□□□□□ -1.74
ITGB6-202ENST00000409583 ANK2Q01484 3957 aa4.18□□□□□ -1.74
ITGB6-202ENST00000409583 MYCBP2O75592 4640 aa4.17□□□□□ -1.74
ITGB6-202ENST00000409583 DNAH17Q9UFH2 4485 aa4.16□□□□□ -1.74
ITGB6-202ENST00000409583 DNAH8Q96JB1 4490 aa4.16□□□□□ -1.74
ITGB6-202ENST00000409583 RYR3Q15413 4870 aa4.16□□□□□ -1.74
ITGB6-202ENST00000409583 DNAH2Q9P225 4427 aa4.13□□□□□ -1.75
ITGB6-202ENST00000409583 DYNC2H1Q8NCM8 4307 aaKnown RBP4.13□□□□□ -1.75
ITGB6-202ENST00000409583 SACSQ9NZJ4 4579 aa4.12□□□□□ -1.75
ITGB6-202ENST00000409583 FAT3Q8TDW7 4589 aa4.1□□□□□ -1.75
ITGB6-202ENST00000409583 VPS13BQ7Z7G8 4022 aa4.1□□□□□ -1.75
ITGB6-202ENST00000409583 HYDINQ4G0P3 5121 aa4.09□□□□□ -1.76
ITGB6-202ENST00000409583 KRTAP4-1Q9BYQ7 146 aa4.05□□□□□ -1.76
ITGB6-202ENST00000409583 LRP1Q07954 4544 aaKnown RBP4.05□□□□□ -1.76
ITGB6-202ENST00000409583 LORP23490 312 aaPredicted RBP4.04□□□□□ -1.76
ITGB6-202ENST00000409583 FAT2Q9NYQ8 4349 aa4.04□□□□□ -1.76
ITGB6-202ENST00000409583 KRTAP17-1Q9BYP8 105 aa4.03□□□□□ -1.76
ITGB6-202ENST00000409583 APOBP04114 4563 aaKnown RBP4.03□□□□□ -1.76
ITGB6-202ENST00000409583 DNAH6Q9C0G6 4158 aa3.99□□□□□ -1.77
ITGB6-202ENST00000409583 DNAH7Q8WXX0 4024 aa3.97□□□□□ -1.77
ITGB6-202ENST00000409583 HERC2O95714 4834 aa3.97□□□□□ -1.77
ITGB6-202ENST00000409583 RYR2Q92736 4967 aa3.93□□□□□ -1.78
ITGB6-202ENST00000409583 HECTD4Q9Y4D8 3996 aa3.93□□□□□ -1.78
ITGB6-202ENST00000409583 KMT2CQ8NEZ4 4911 aaKnown RBP3.92□□□□□ -1.78
ITGB6-202ENST00000409583 PKHD1P08F94 4074 aa3.91□□□□□ -1.78
ITGB6-202ENST00000409583 LRP2P98164 4655 aa3.9□□□□□ -1.78
ITGB6-202ENST00000409583 FRAS1Q86XX4 4008 aa3.89□□□□□ -1.79
ITGB6-202ENST00000409583 KRTAP10-12P60413 245 aa3.88□□□□□ -1.79
ITGB6-202ENST00000409583 MT1HP80294 61 aa3.87□□□□□ -1.79
ITGB6-202ENST00000409583 MT2AP02795 61 aa3.8□□□□□ -1.8
ITGB6-202ENST00000409583 PCLOQ9Y6V0 5065 aa3.8□□□□□ -1.8
ITGB6-202ENST00000409583 CRCT1Q9UGL9 99 aa3.79□□□□□ -1.8
ITGB6-202ENST00000409583 BIRC6Q9NR09 4857 aa3.79□□□□□ -1.8
ITGB6-202ENST00000409583 LCE3AQ5TA76 89 aa3.78□□□□□ -1.8
ITGB6-202ENST00000409583 KRTAP12-3P60328 96 aa3.76□□□□□ -1.81
ITGB6-202ENST00000409583 MT1FP04733 61 aa3.76□□□□□ -1.81
ITGB6-202ENST00000409583 HSPG2P98160 4391 aa3.75□□□□□ -1.81
ITGB6-202ENST00000409583 EPPK1P58107 5090 aaKnown RBP3.72□□□□□ -1.81
ITGB6-202ENST00000409583 PKD1P98161 4303 aa3.72□□□□□ -1.81
ITGB6-202ENST00000409583 SPRR2GQ9BYE4 73 aa3.68□□□□□ -1.82
ITGB6-202ENST00000409583 LPAP08519 4548 aa3.67□□□□□ -1.82
ITGB6-202ENST00000409583 ABCA13Q86UQ4 5058 aa3.66□□□□□ -1.82
ITGB6-202ENST00000409583 KRTAP8-1Q8IUC2 63 aa3.65□□□□□ -1.82
ITGB6-202ENST00000409583 SPRR5A0A1B0GTR4 108 aa3.65□□□□□ -1.82
ITGB6-202ENST00000409583 HERC1Q15751 4861 aa3.64□□□□□ -1.83
ITGB6-202ENST00000409583 FSIP2Q5CZC0 6907 aa3.61□□□□□ -1.83
ITGB6-202ENST00000409583 PKHD1L1Q86WI1 4243 aa3.58□□□□□ -1.84
ITGB6-202ENST00000409583 KRTAP19-1Q8IUB9 90 aa3.58□□□□□ -1.84
ITGB6-202ENST00000409583 UBR4Q5T4S7 5183 aa3.55□□□□□ -1.84
ITGB6-202ENST00000409583 LCE2CQ5TA81 110 aa3.53□□□□□ -1.84
ITGB6-202ENST00000409583 RNF213Q63HN8 5207 aa3.51□□□□□ -1.85
ITGB6-202ENST00000409583 KRTAP9-8Q9BYQ0 159 aa3.5□□□□□ -1.85
ITGB6-202ENST00000409583 SPRR2FQ96RM1 72 aa3.49□□□□□ -1.85
ITGB6-202ENST00000409583 KRTAP19-5Q3LI72 72 aa3.46□□□□□ -1.86
ITGB6-202ENST00000409583 TNXBP22105 4242 aa3.45□□□□□ -1.86
ITGB6-202ENST00000409583 KRTAP10-7P60409 375 aaPredicted RBP3.45□□□□□ -1.86
ITGB6-202ENST00000409583 KRTAP19-8Q3LI54 63 aa3.45□□□□□ -1.86
ITGB6-202ENST00000409583 MT1BP07438 61 aa3.43□□□□□ -1.86
ITGB6-202ENST00000409583 KRTAP19-2Q3LHN2 52 aa3.42□□□□□ -1.86
ITGB6-202ENST00000409583 MUC2Q02817 5179 aa3.42□□□□□ -1.86
ITGB6-202ENST00000409583 KRTAP10-5P60370 271 aa3.4□□□□□ -1.86
ITGB6-202ENST00000409583 MT1XP80297 61 aa3.4□□□□□ -1.86
ITGB6-202ENST00000409583 FAT4Q6V0I7 4981 aa3.39□□□□□ -1.87
ITGB6-202ENST00000409583 KRTAP9-3Q9BYQ3 159 aa3.39□□□□□ -1.87
ITGB6-202ENST00000409583 SYNE1Q8NF91 8797 aaKnown RBP3.38□□□□□ -1.87
ITGB6-202ENST00000409583 MUC17Q685J3 4493 aa3.38□□□□□ -1.87
ITGB6-202ENST00000409583 KRTAP4-8A0A0G2JLE6 195 aa3.36□□□□□ -1.87
ITGB6-202ENST00000409583 KRTAP4-8Q9BYQ9 185 aa3.36□□□□□ -1.87
ITGB6-202ENST00000409583 LCE2BO14633 110 aa3.32□□□□□ -1.88
ITGB6-202ENST00000409583 FLGP20930 4061 aaPredicted RBP3.3□□□□□ -1.88
ITGB6-202ENST00000409583 LCE3CQ5T5A8 94 aa3.3□□□□□ -1.88
ITGB6-202ENST00000409583 HMCN2Q8NDA2 5059 aa3.29□□□□□ -1.88
ITGB6-202ENST00000409583 OBSCNQ5VST9 7968 aa3.23□□□□□ -1.89
ITGB6-202ENST00000409583 SPRR2EP22531 72 aa3.22□□□□□ -1.89
ITGB6-202ENST00000409583 SPRR2BP35325 72 aa3.22□□□□□ -1.89
ITGB6-202ENST00000409583 SPRR2AP35326 72 aa3.22□□□□□ -1.89
ITGB6-202ENST00000409583 KRTAP12-4P60329 112 aa3.22□□□□□ -1.89
ITGB6-202ENST00000409583 LCE2AQ5TA79 106 aaPredicted RBP3.17□□□□□ -1.9
ITGB6-202ENST00000409583 MT1GP13640 62 aa3.16□□□□□ -1.9
ITGB6-202ENST00000409583 KRTAP4-7Q9BYR0 210 aa3.13□□□□□ -1.91
ITGB6-202ENST00000409583 KRTAP9-2Q9BYQ4 174 aa3.12□□□□□ -1.91
ITGB6-202ENST00000409583 SPRR2DP22532 72 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms