RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 Q5VV11 94 aa8.8□□□□□ -1
TSPAN4-209ENST00000409543 H0Y9P7 68 aa8.79□□□□□ -1
TSPAN4-209ENST00000409543 LINC00643Q86TS7 51 aa8.77□□□□□ -1.01
TSPAN4-209ENST00000409543 KRTAP6-3Q3LI67 103 aa8.73□□□□□ -1.01
TSPAN4-209ENST00000409543 A6NN06 94 aa8.72□□□□□ -1.01
TSPAN4-209ENST00000409543 CRIPTQ9P021 101 aa8.7□□□□□ -1.02
TSPAN4-209ENST00000409543 IMUPQ9GZP8 106 aa8.69□□□□□ -1.02
TSPAN4-209ENST00000409543 NDUFC1O43677 76 aa8.68□□□□□ -1.02
TSPAN4-209ENST00000409543 A8MUN3 132 aa8.65□□□□□ -1.02
TSPAN4-209ENST00000409543 LINC00208Q96KT6 92 aa8.65□□□□□ -1.02
TSPAN4-209ENST00000409543 A0A1B0GV90 55 aa8.64□□□□□ -1.03
TSPAN4-209ENST00000409543 H0YAA0 97 aa8.63□□□□□ -1.03
TSPAN4-209ENST00000409543 OCR1Q9BZK8 76 aa8.62□□□□□ -1.03
TSPAN4-209ENST00000409543 KRTAP10-5P60370 271 aa8.61□□□□□ -1.03
TSPAN4-209ENST00000409543 MP68P56378 58 aa8.6□□□□□ -1.03
TSPAN4-209ENST00000409543 ADM2Q7Z4H4 148 aa8.52□□□□□ -1.05
TSPAN4-209ENST00000409543 J3QR89 54 aa8.51□□□□□ -1.05
TSPAN4-209ENST00000409543 H3BPC8 53 aa8.49□□□□□ -1.05
TSPAN4-209ENST00000409543 NEBP20929 6669 aa8.46□□□□□ -1.05
TSPAN4-209ENST00000409543 SCGB1A1P11684 91 aa8.42□□□□□ -1.06
TSPAN4-209ENST00000409543 DMAC1Q96GE9 116 aa8.39□□□□□ -1.07
TSPAN4-209ENST00000409543 MUC12Q9UKN1 5478 aa8.34□□□□□ -1.07
TSPAN4-209ENST00000409543 C20orf197Q8N268 126 aa8.32□□□□□ -1.08
TSPAN4-209ENST00000409543 P0C880 135 aa8.31□□□□□ -1.08
TSPAN4-209ENST00000409543 KRTAP5-9P26371 169 aa8.31□□□□□ -1.08
TSPAN4-209ENST00000409543 R4GN34 69 aa8.3□□□□□ -1.08
TSPAN4-209ENST00000409543 PRO2289Q9P1D8 64 aa8.29□□□□□ -1.08
TSPAN4-209ENST00000409543 PLAC4Q8WY50 150 aa8.28□□□□□ -1.08
TSPAN4-209ENST00000409543 MT1XP80297 61 aa8.24□□□□□ -1.09
TSPAN4-209ENST00000409543 KRTAP3-2Q9BYR7 98 aa8.24□□□□□ -1.09
TSPAN4-209ENST00000409543 M0QZ58 72 aa8.23□□□□□ -1.09
TSPAN4-209ENST00000409543 TRAV7A0A075B6U4 112 aa8.22□□□□□ -1.09
TSPAN4-209ENST00000409543 KMT2DO14686 5537 aa8.22□□□□□ -1.09
TSPAN4-209ENST00000409543 MT-ATP8P03928 68 aa8.2□□□□□ -1.1
TSPAN4-209ENST00000409543 SMIM20Q8N5G0 67 aa8.2□□□□□ -1.1
TSPAN4-209ENST00000409543 ACYP2P14621 99 aa8.18□□□□□ -1.1
TSPAN4-209ENST00000409543 K7ERU9 68 aa8.15□□□□□ -1.1
TSPAN4-209ENST00000409543 MDN1Q9NU22 5596 aa8.13□□□□□ -1.11
TSPAN4-209ENST00000409543 LINC01554Q52M75 96 aa8.1□□□□□ -1.11
TSPAN4-209ENST00000409543 SPTSSBQ8NFR3 76 aa8.1□□□□□ -1.11
TSPAN4-209ENST00000409543 KRTAP20-1Q3LI63 56 aa8.08□□□□□ -1.12
TSPAN4-209ENST00000409543 KRTAP12-2P59991 146 aa8.07□□□□□ -1.12
TSPAN4-209ENST00000409543 SPRR2FQ96RM1 72 aa8.03□□□□□ -1.12
TSPAN4-209ENST00000409543 CHKB-CPT1BH3BT56 60 aa8.01□□□□□ -1.13
TSPAN4-209ENST00000409543 KRTAP8-1Q8IUC2 63 aa8.01□□□□□ -1.13
TSPAN4-209ENST00000409543 SNURFQ9Y675 71 aa8□□□□□ -1.13
TSPAN4-209ENST00000409543 SPRR2EP22531 72 aa7.93□□□□□ -1.14
TSPAN4-209ENST00000409543 SPRR2BP35325 72 aa7.93□□□□□ -1.14
TSPAN4-209ENST00000409543 SPRR2AP35326 72 aa7.93□□□□□ -1.14
TSPAN4-209ENST00000409543 SPANXA2-OT1Q8N9U9 137 aa7.93□□□□□ -1.14
TSPAN4-209ENST00000409543 KRTAP4-8A0A0G2JLE6 195 aa7.89□□□□□ -1.15
TSPAN4-209ENST00000409543 KRTAP2-3P0C7H8 128 aa7.89□□□□□ -1.15
TSPAN4-209ENST00000409543 KRTAP4-8Q9BYQ9 185 aa7.89□□□□□ -1.15
TSPAN4-209ENST00000409543 KRTAP2-4Q9BYR9 128 aa7.89□□□□□ -1.15
TSPAN4-209ENST00000409543 SERP2Q8N6R1 65 aa7.88□□□□□ -1.15
TSPAN4-209ENST00000409543 KRTAP10-7P60409 375 aaPredicted RBP7.86□□□□□ -1.15
TSPAN4-209ENST00000409543 KRTAP10-12P60413 245 aa7.84□□□□□ -1.15
TSPAN4-209ENST00000409543 LCE1AQ5T7P2 110 aa7.84□□□□□ -1.15
TSPAN4-209ENST00000409543 KRTAP13-4Q3LI77 160 aa7.74□□□□□ -1.17
TSPAN4-209ENST00000409543 COA5Q86WW8 74 aa7.7□□□□□ -1.18
TSPAN4-209ENST00000409543 SPRR2DP22532 72 aa7.67□□□□□ -1.18
TSPAN4-209ENST00000409543 CAMK2N1Q7Z7J9 78 aa7.63□□□□□ -1.19
TSPAN4-209ENST00000409543 KRTAP2-2Q9BYT5 123 aa7.63□□□□□ -1.19
TSPAN4-209ENST00000409543 KRTAP2-1Q9BYU5 128 aa7.63□□□□□ -1.19
TSPAN4-209ENST00000409543 COX7CP15954 63 aa7.62□□□□□ -1.19
TSPAN4-209ENST00000409543 SEC61GP60059 68 aa7.6□□□□□ -1.19
TSPAN4-209ENST00000409543 SERP1Q9Y6X1 66 aa7.58□□□□□ -1.2
TSPAN4-209ENST00000409543 H7BZZ5 65 aa7.52□□□□□ -1.21
TSPAN4-209ENST00000409543 A0A0D9SG42 100 aa7.49□□□□□ -1.21
TSPAN4-209ENST00000409543 CYSTM1Q9H1C7 97 aa7.49□□□□□ -1.21
TSPAN4-209ENST00000409543 A0A1B0GU33 70 aa7.48□□□□□ -1.21
TSPAN4-209ENST00000409543 LCE3BQ5TA77 95 aa7.47□□□□□ -1.21
TSPAN4-209ENST00000409543 SPATA8Q6RVD6 105 aa7.47□□□□□ -1.21
TSPAN4-209ENST00000409543 SPINT4Q6UDR6 99 aa7.4□□□□□ -1.22
TSPAN4-209ENST00000409543 KRTAP19-7Q3SYF9 63 aa7.37□□□□□ -1.23
TSPAN4-209ENST00000409543 KRTAP12-1P59990 96 aa7.36□□□□□ -1.23
TSPAN4-209ENST00000409543 A0A1B0GU69 56 aa7.31□□□□□ -1.24
TSPAN4-209ENST00000409543 MT1EP04732 61 aa7.31□□□□□ -1.24
TSPAN4-209ENST00000409543 ANAPC13Q9BS18 74 aa7.3□□□□□ -1.24
TSPAN4-209ENST00000409543 LCE5AQ5TCM9 118 aa7.29□□□□□ -1.24
TSPAN4-209ENST00000409543 SMIM26A0A096LP01 95 aa7.27□□□□□ -1.25
TSPAN4-209ENST00000409543 KRTAP19-3Q7Z4W3 81 aa7.26□□□□□ -1.25
TSPAN4-209ENST00000409543 DSTQ03001 7570 aaKnown RBP7.23□□□□□ -1.25
TSPAN4-209ENST00000409543 A8MU10 97 aa7.19□□□□□ -1.26
TSPAN4-209ENST00000409543 KRTAP19-5Q3LI72 72 aa7.17□□□□□ -1.26
TSPAN4-209ENST00000409543 CCDC179H3BU77 68 aa7.16□□□□□ -1.26
TSPAN4-209ENST00000409543 ATP5EP56381 51 aaPredicted RBP7.11□□□□□ -1.27
TSPAN4-209ENST00000409543 MT1GP13640 62 aa7.1□□□□□ -1.27
TSPAN4-209ENST00000409543 PRR15LQ9BU68 103 aa7.09□□□□□ -1.27
TSPAN4-209ENST00000409543 C10orf95Q9H7T3 257 aa7.05□□□□□ -1.28
TSPAN4-209ENST00000409543 TNP1P09430 55 aa7.03□□□□□ -1.28
TSPAN4-209ENST00000409543 PP632Q6XCG6 107 aa7.03□□□□□ -1.28
TSPAN4-209ENST00000409543 LINC01558Q9Y6Z2 57 aa7.01□□□□□ -1.29
TSPAN4-209ENST00000409543 LCE3AQ5TA76 89 aa6.99□□□□□ -1.29
TSPAN4-209ENST00000409543 MT1LQ93083 61 aa6.98□□□□□ -1.29
TSPAN4-209ENST00000409543 MT1MQ8N339 61 aa6.96□□□□□ -1.3
TSPAN4-209ENST00000409543 KRTAP4-9Q9BYQ8 210 aa6.94□□□□□ -1.3
TSPAN4-209ENST00000409543 TMEM258P61165 79 aa6.9□□□□□ -1.3
TSPAN4-209ENST00000409543 UQCR11O14957 56 aa6.85□□□□□ -1.31
TSPAN4-209ENST00000409543 GPR98Q8WXG9 6306 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms