RNA–Protein interactions for RNA: ENST00000409483.5

PTPRN2-205, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN2, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-205ENST00000409483 FAT1Q14517 4588 aa7.9□□□□□ -1.14
PTPRN2-205ENST00000409483 PRKDCP78527 4128 aaKnown RBP7.89□□□□□ -1.15
PTPRN2-205ENST00000409483 PP632Q6XCG6 107 aa7.85□□□□□ -1.15
PTPRN2-205ENST00000409483 KRTAP3-3Q9BYR6 98 aa7.84□□□□□ -1.15
PTPRN2-205ENST00000409483 VPS13DQ5THJ4 4388 aa7.82□□□□□ -1.16
PTPRN2-205ENST00000409483 DNAH8Q96JB1 4490 aa7.8□□□□□ -1.16
PTPRN2-205ENST00000409483 LRP1BQ9NZR2 4599 aa7.78□□□□□ -1.16
PTPRN2-205ENST00000409483 KMT2AQ03164 3969 aa7.78□□□□□ -1.16
PTPRN2-205ENST00000409483 KRTAP3-2Q9BYR7 98 aa7.77□□□□□ -1.16
PTPRN2-205ENST00000409483 LYSTQ99698 3801 aa7.77□□□□□ -1.17
PTPRN2-205ENST00000409483 DNAH17Q9UFH2 4485 aa7.73□□□□□ -1.17
PTPRN2-205ENST00000409483 DYNC1H1Q14204 4646 aaKnown RBP7.72□□□□□ -1.17
PTPRN2-205ENST00000409483 DNAH2Q9P225 4427 aa7.67□□□□□ -1.18
PTPRN2-205ENST00000409483 MYCBP2O75592 4640 aa7.62□□□□□ -1.19
PTPRN2-205ENST00000409483 ALMS1Q8TCU4 4167 aa7.62□□□□□ -1.19
PTPRN2-205ENST00000409483 RYR1P21817 5038 aa7.59□□□□□ -1.19
PTPRN2-205ENST00000409483 KIAA1109Q2LD37 5005 aa7.5□□□□□ -1.21
PTPRN2-205ENST00000409483 FRAS1Q86XX4 4008 aa7.5□□□□□ -1.21
PTPRN2-205ENST00000409483 DNAH7Q8WXX0 4024 aa7.5□□□□□ -1.21
PTPRN2-205ENST00000409483 PRO2289Q9P1D8 64 aa7.49□□□□□ -1.21
PTPRN2-205ENST00000409483 SACSQ9NZJ4 4579 aa7.49□□□□□ -1.21
PTPRN2-205ENST00000409483 VPS13BQ7Z7G8 4022 aa7.48□□□□□ -1.21
PTPRN2-205ENST00000409483 LORP23490 312 aaPredicted RBP7.47□□□□□ -1.21
PTPRN2-205ENST00000409483 DNAH3Q8TD57 4116 aa7.47□□□□□ -1.21
PTPRN2-205ENST00000409483 CMYA5Q8N3K9 4069 aa7.47□□□□□ -1.21
PTPRN2-205ENST00000409483 DNAH6Q9C0G6 4158 aa7.44□□□□□ -1.22
PTPRN2-205ENST00000409483 DYNC2H1Q8NCM8 4307 aaKnown RBP7.41□□□□□ -1.22
PTPRN2-205ENST00000409483 FAT3Q8TDW7 4589 aa7.39□□□□□ -1.23
PTPRN2-205ENST00000409483 LRP1Q07954 4544 aaKnown RBP7.38□□□□□ -1.23
PTPRN2-205ENST00000409483 FAT2Q9NYQ8 4349 aa7.34□□□□□ -1.23
PTPRN2-205ENST00000409483 APOBP04114 4563 aaKnown RBP7.33□□□□□ -1.24
PTPRN2-205ENST00000409483 RYR3Q15413 4870 aa7.32□□□□□ -1.24
PTPRN2-205ENST00000409483 KRTAP4-1Q9BYQ7 146 aa7.31□□□□□ -1.24
PTPRN2-205ENST00000409483 HECTD4Q9Y4D8 3996 aa7.28□□□□□ -1.24
PTPRN2-205ENST00000409483 HYDINQ4G0P3 5121 aa7.25□□□□□ -1.25
PTPRN2-205ENST00000409483 KRTAP17-1Q9BYP8 105 aa7.23□□□□□ -1.25
PTPRN2-205ENST00000409483 KRTAP15-1Q3LI76 137 aa7.2□□□□□ -1.26
PTPRN2-205ENST00000409483 PKHD1P08F94 4074 aa7.18□□□□□ -1.26
PTPRN2-205ENST00000409483 LRP2P98164 4655 aa7.05□□□□□ -1.28
PTPRN2-205ENST00000409483 RYR2Q92736 4967 aa7.01□□□□□ -1.29
PTPRN2-205ENST00000409483 KRTAP10-12P60413 245 aa7.01□□□□□ -1.29
PTPRN2-205ENST00000409483 LCE3AQ5TA76 89 aa6.97□□□□□ -1.29
PTPRN2-205ENST00000409483 KMT2CQ8NEZ4 4911 aaKnown RBP6.96□□□□□ -1.3
PTPRN2-205ENST00000409483 HERC2O95714 4834 aa6.91□□□□□ -1.3
PTPRN2-205ENST00000409483 KRTAP12-3P60328 96 aa6.87□□□□□ -1.31
PTPRN2-205ENST00000409483 MT1HP80294 61 aa6.84□□□□□ -1.32
PTPRN2-205ENST00000409483 HSPG2P98160 4391 aa6.81□□□□□ -1.32
PTPRN2-205ENST00000409483 PKD1P98161 4303 aa6.79□□□□□ -1.32
PTPRN2-205ENST00000409483 MT2AP02795 61 aa6.77□□□□□ -1.33
PTPRN2-205ENST00000409483 LPAP08519 4548 aa6.76□□□□□ -1.33
PTPRN2-205ENST00000409483 CRCT1Q9UGL9 99 aa6.75□□□□□ -1.33
PTPRN2-205ENST00000409483 MT1FP04733 61 aa6.72□□□□□ -1.33
PTPRN2-205ENST00000409483 KRTAP23-1A1A580 65 aa6.65□□□□□ -1.34
PTPRN2-205ENST00000409483 SPRR2GQ9BYE4 73 aa6.65□□□□□ -1.34
PTPRN2-205ENST00000409483 EPPK1P58107 5090 aaKnown RBP6.57□□□□□ -1.36
PTPRN2-205ENST00000409483 PCLOQ9Y6V0 5065 aa6.51□□□□□ -1.37
PTPRN2-205ENST00000409483 KRTAP19-1Q8IUB9 90 aa6.5□□□□□ -1.37
PTPRN2-205ENST00000409483 ABCA13Q86UQ4 5058 aa6.47□□□□□ -1.37
PTPRN2-205ENST00000409483 BIRC6Q9NR09 4857 aa6.46□□□□□ -1.38
PTPRN2-205ENST00000409483 PKHD1L1Q86WI1 4243 aa6.43□□□□□ -1.38
PTPRN2-205ENST00000409483 TNXBP22105 4242 aa6.42□□□□□ -1.38
PTPRN2-205ENST00000409483 HERC1Q15751 4861 aa6.38□□□□□ -1.39
PTPRN2-205ENST00000409483 KRTAP8-1Q8IUC2 63 aa6.37□□□□□ -1.39
PTPRN2-205ENST00000409483 INE1O15225 51 aa6.36□□□□□ -1.39
PTPRN2-205ENST00000409483 LCE2CQ5TA81 110 aa6.33□□□□□ -1.4
PTPRN2-205ENST00000409483 KRTAP19-5Q3LI72 72 aa6.32□□□□□ -1.4
PTPRN2-205ENST00000409483 KRTAP10-7P60409 375 aaPredicted RBP6.31□□□□□ -1.4
PTPRN2-205ENST00000409483 MUC2Q02817 5179 aa6.28□□□□□ -1.4
PTPRN2-205ENST00000409483 KRTAP9-8Q9BYQ0 159 aa6.26□□□□□ -1.41
PTPRN2-205ENST00000409483 KRTAP19-8Q3LI54 63 aa6.21□□□□□ -1.41
PTPRN2-205ENST00000409483 MT1XP80297 61 aa6.21□□□□□ -1.42
PTPRN2-205ENST00000409483 MT1BP07438 61 aa6.2□□□□□ -1.42
PTPRN2-205ENST00000409483 MUC17Q685J3 4493 aa6.2□□□□□ -1.42
PTPRN2-205ENST00000409483 KRTAP19-2Q3LHN2 52 aa6.2□□□□□ -1.42
PTPRN2-205ENST00000409483 RNF213Q63HN8 5207 aa6.18□□□□□ -1.42
PTPRN2-205ENST00000409483 FSIP2Q5CZC0 6907 aa6.18□□□□□ -1.42
PTPRN2-205ENST00000409483 KRTAP10-5P60370 271 aa6.17□□□□□ -1.42
PTPRN2-205ENST00000409483 UBR4Q5T4S7 5183 aa6.13□□□□□ -1.43
PTPRN2-205ENST00000409483 FAT4Q6V0I7 4981 aa6.12□□□□□ -1.43
PTPRN2-205ENST00000409483 LCE3CQ5T5A8 94 aa6.09□□□□□ -1.43
PTPRN2-205ENST00000409483 KRTAP4-8A0A0G2JLE6 195 aa6.08□□□□□ -1.44
PTPRN2-205ENST00000409483 KRTAP4-8Q9BYQ9 185 aa6.08□□□□□ -1.44
PTPRN2-205ENST00000409483 FLGP20930 4061 aaPredicted RBP6.07□□□□□ -1.44
PTPRN2-205ENST00000409483 KRTAP9-3Q9BYQ3 159 aa6.04□□□□□ -1.44
PTPRN2-205ENST00000409483 SPRR2FQ96RM1 72 aa6.03□□□□□ -1.44
PTPRN2-205ENST00000409483 LCE2BO14633 110 aa5.89□□□□□ -1.47
PTPRN2-205ENST00000409483 HMCN2Q8NDA2 5059 aa5.89□□□□□ -1.47
PTPRN2-205ENST00000409483 SPRR5A0A1B0GTR4 108 aa5.82□□□□□ -1.48
PTPRN2-205ENST00000409483 KRTAP4-7Q9BYR0 210 aa5.78□□□□□ -1.48
PTPRN2-205ENST00000409483 MT1GP13640 62 aa5.73□□□□□ -1.49
PTPRN2-205ENST00000409483 SYNE1Q8NF91 8797 aaKnown RBP5.73□□□□□ -1.49
PTPRN2-205ENST00000409483 LCE3BQ5TA77 95 aa5.61□□□□□ -1.51
PTPRN2-205ENST00000409483 OBSCNQ5VST9 7968 aa5.56□□□□□ -1.52
PTPRN2-205ENST00000409483 MT1LQ93083 61 aa5.51□□□□□ -1.53
PTPRN2-205ENST00000409483 SPRR2EP22531 72 aa5.51□□□□□ -1.53
PTPRN2-205ENST00000409483 SPRR2BP35325 72 aa5.51□□□□□ -1.53
PTPRN2-205ENST00000409483 SPRR2AP35326 72 aa5.51□□□□□ -1.53
PTPRN2-205ENST00000409483 KRTAP19-4Q3LI73 84 aa5.5□□□□□ -1.53
PTPRN2-205ENST00000409483 MT1EP04732 61 aa5.49□□□□□ -1.53
PTPRN2-205ENST00000409483 USH2AO75445 5202 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms