RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 XP32Q5T750 250 aa2.99□□□□□ -1.93
R3HDM1-202ENST00000409478 J3QL48 77 aa2.99□□□□□ -1.93
R3HDM1-202ENST00000409478 KRTAP12-2P59991 146 aa2.99□□□□□ -1.93
R3HDM1-202ENST00000409478 DNAH5Q8TE73 4624 aa2.98□□□□□ -1.93
R3HDM1-202ENST00000409478 KRTAP12-1P59990 96 aa2.95□□□□□ -1.94
R3HDM1-202ENST00000409478 LRP1BQ9NZR2 4599 aa2.95□□□□□ -1.94
R3HDM1-202ENST00000409478 Q5VSD8 79 aa2.93□□□□□ -1.94
R3HDM1-202ENST00000409478 VPS13BQ7Z7G8 4022 aa2.93□□□□□ -1.94
R3HDM1-202ENST00000409478 M0QZ58 72 aa2.92□□□□□ -1.94
R3HDM1-202ENST00000409478 SACSQ9NZJ4 4579 aa2.91□□□□□ -1.94
R3HDM1-202ENST00000409478 PLAC4Q8WY50 150 aa2.9□□□□□ -1.94
R3HDM1-202ENST00000409478 PKD1P98161 4303 aa2.88□□□□□ -1.95
R3HDM1-202ENST00000409478 A0A1B0GVY2 172 aa2.88□□□□□ -1.95
R3HDM1-202ENST00000409478 PKHD1L1Q86WI1 4243 aa2.87□□□□□ -1.95
R3HDM1-202ENST00000409478 KRTAP10-8P60410 259 aa2.85□□□□□ -1.95
R3HDM1-202ENST00000409478 FAT2Q9NYQ8 4349 aa2.83□□□□□ -1.96
R3HDM1-202ENST00000409478 PKHD1P08F94 4074 aa2.82□□□□□ -1.96
R3HDM1-202ENST00000409478 PP632Q6XCG6 107 aa2.81□□□□□ -1.96
R3HDM1-202ENST00000409478 SEC61BP60468 96 aaKnown RBP2.8□□□□□ -1.96
R3HDM1-202ENST00000409478 KRTAP10-4P60372 401 aaPredicted RBP2.79□□□□□ -1.96
R3HDM1-202ENST00000409478 APOBP04114 4563 aaKnown RBP2.79□□□□□ -1.96
R3HDM1-202ENST00000409478 R4GN34 69 aa2.77□□□□□ -1.97
R3HDM1-202ENST00000409478 LRP1Q07954 4544 aaKnown RBP2.77□□□□□ -1.97
R3HDM1-202ENST00000409478 MYCBP2O75592 4640 aa2.74□□□□□ -1.97
R3HDM1-202ENST00000409478 FAT3Q8TDW7 4589 aa2.74□□□□□ -1.97
R3HDM1-202ENST00000409478 RYR2Q92736 4967 aa2.73□□□□□ -1.97
R3HDM1-202ENST00000409478 TNXBP22105 4242 aa2.73□□□□□ -1.97
R3HDM1-202ENST00000409478 KMT2CQ8NEZ4 4911 aaKnown RBP2.73□□□□□ -1.97
R3HDM1-202ENST00000409478 KIAA1109Q2LD37 5005 aa2.73□□□□□ -1.97
R3HDM1-202ENST00000409478 KRTAP4-5Q9BYR2 181 aa2.72□□□□□ -1.97
R3HDM1-202ENST00000409478 FAT1Q14517 4588 aa2.72□□□□□ -1.97
R3HDM1-202ENST00000409478 HYDINQ4G0P3 5121 aa2.72□□□□□ -1.97
R3HDM1-202ENST00000409478 CAMK2N1Q7Z7J9 78 aa2.71□□□□□ -1.98
R3HDM1-202ENST00000409478 DYNC1H1Q14204 4646 aaKnown RBP2.71□□□□□ -1.98
R3HDM1-202ENST00000409478 HSPG2P98160 4391 aa2.69□□□□□ -1.98
R3HDM1-202ENST00000409478 RYR3Q15413 4870 aa2.68□□□□□ -1.98
R3HDM1-202ENST00000409478 SPRR5A0A1B0GTR4 108 aa2.67□□□□□ -1.98
R3HDM1-202ENST00000409478 RYR1P21817 5038 aa2.67□□□□□ -1.98
R3HDM1-202ENST00000409478 M0R2T5 61 aa2.66□□□□□ -1.98
R3HDM1-202ENST00000409478 KRTAP23-1A1A580 65 aa2.66□□□□□ -1.98
R3HDM1-202ENST00000409478 PRO2289Q9P1D8 64 aa2.65□□□□□ -1.99
R3HDM1-202ENST00000409478 LORP23490 312 aaPredicted RBP2.62□□□□□ -1.99
R3HDM1-202ENST00000409478 TNP1P09430 55 aa2.61□□□□□ -1.99
R3HDM1-202ENST00000409478 MT1HL1P0DM35 61 aa2.6□□□□□ -1.99
R3HDM1-202ENST00000409478 INE1O15225 51 aa2.59□□□□□ -2
R3HDM1-202ENST00000409478 BIRC6Q9NR09 4857 aa2.58□□□□□ -2
R3HDM1-202ENST00000409478 EPPK1P58107 5090 aaKnown RBP2.58□□□□□ -2
R3HDM1-202ENST00000409478 LPAP08519 4548 aa2.57□□□□□ -2
R3HDM1-202ENST00000409478 KRTAP17-1Q9BYP8 105 aa2.57□□□□□ -2
R3HDM1-202ENST00000409478 HERC2O95714 4834 aa2.55□□□□□ -2
R3HDM1-202ENST00000409478 LCE2BO14633 110 aa2.5□□□□□ -2.01
R3HDM1-202ENST00000409478 LRP2P98164 4655 aa2.49□□□□□ -2.01
R3HDM1-202ENST00000409478 LCE2AQ5TA79 106 aaPredicted RBP2.48□□□□□ -2.01
R3HDM1-202ENST00000409478 LCE2CQ5TA81 110 aa2.46□□□□□ -2.02
R3HDM1-202ENST00000409478 ABCA13Q86UQ4 5058 aa2.45□□□□□ -2.02
R3HDM1-202ENST00000409478 MUC17Q685J3 4493 aa2.44□□□□□ -2.02
R3HDM1-202ENST00000409478 KRTAP19-2Q3LHN2 52 aa2.42□□□□□ -2.02
R3HDM1-202ENST00000409478 PCLOQ9Y6V0 5065 aa2.42□□□□□ -2.02
R3HDM1-202ENST00000409478 KRTAP4-1Q9BYQ7 146 aa2.42□□□□□ -2.02
R3HDM1-202ENST00000409478 HERC1Q15751 4861 aa2.42□□□□□ -2.02
R3HDM1-202ENST00000409478 LCE3AQ5TA76 89 aa2.39□□□□□ -2.03
R3HDM1-202ENST00000409478 FLGP20930 4061 aaPredicted RBP2.39□□□□□ -2.03
R3HDM1-202ENST00000409478 KRTAP10-10P60014 251 aa2.37□□□□□ -2.03
R3HDM1-202ENST00000409478 KRTAP8-1Q8IUC2 63 aa2.36□□□□□ -2.03
R3HDM1-202ENST00000409478 RNF213Q63HN8 5207 aa2.35□□□□□ -2.03
R3HDM1-202ENST00000409478 SPRR2GQ9BYE4 73 aa2.34□□□□□ -2.03
R3HDM1-202ENST00000409478 UBR4Q5T4S7 5183 aa2.33□□□□□ -2.04
R3HDM1-202ENST00000409478 MUC2Q02817 5179 aa2.31□□□□□ -2.04
R3HDM1-202ENST00000409478 LOC100996750A0A140TA64 210 aa2.3□□□□□ -2.04
R3HDM1-202ENST00000409478 KRTAP4-6Q9BYQ5 205 aa2.3□□□□□ -2.04
R3HDM1-202ENST00000409478 FSIP2Q5CZC0 6907 aa2.29□□□□□ -2.04
R3HDM1-202ENST00000409478 KRTAP12-3P60328 96 aa2.29□□□□□ -2.04
R3HDM1-202ENST00000409478 KRTAP19-1Q8IUB9 90 aa2.28□□□□□ -2.04
R3HDM1-202ENST00000409478 KRTAP10-12P60413 245 aa2.28□□□□□ -2.04
R3HDM1-202ENST00000409478 HMCN2Q8NDA2 5059 aa2.27□□□□□ -2.05
R3HDM1-202ENST00000409478 FAT4Q6V0I7 4981 aa2.24□□□□□ -2.05
R3HDM1-202ENST00000409478 KRTAP10-5P60370 271 aa2.22□□□□□ -2.05
R3HDM1-202ENST00000409478 MT1HP80294 61 aa2.22□□□□□ -2.05
R3HDM1-202ENST00000409478 KRTAP19-8Q3LI54 63 aa2.2□□□□□ -2.06
R3HDM1-202ENST00000409478 MT1XP80297 61 aa2.18□□□□□ -2.06
R3HDM1-202ENST00000409478 LCE3CQ5T5A8 94 aa2.17□□□□□ -2.06
R3HDM1-202ENST00000409478 MT1FP04733 61 aa2.15□□□□□ -2.07
R3HDM1-202ENST00000409478 MT2AP02795 61 aa2.14□□□□□ -2.07
R3HDM1-202ENST00000409478 MT1BP07438 61 aa2.13□□□□□ -2.07
R3HDM1-202ENST00000409478 KRTAP10-7P60409 375 aaPredicted RBP2.13□□□□□ -2.07
R3HDM1-202ENST00000409478 KRTAP2-3P0C7H8 128 aa2.13□□□□□ -2.07
R3HDM1-202ENST00000409478 KRTAP2-4Q9BYR9 128 aa2.13□□□□□ -2.07
R3HDM1-202ENST00000409478 KRTAP2-1Q9BYU5 128 aa2.13□□□□□ -2.07
R3HDM1-202ENST00000409478 KRTAP9-8Q9BYQ0 159 aa2.1□□□□□ -2.07
R3HDM1-202ENST00000409478 KRTAP19-5Q3LI72 72 aa2.09□□□□□ -2.07
R3HDM1-202ENST00000409478 KRTAP19-4Q3LI73 84 aa2.08□□□□□ -2.08
R3HDM1-202ENST00000409478 KRTAP9-6A8MVA2 160 aa2.06□□□□□ -2.08
R3HDM1-202ENST00000409478 KRTAP9-6A0A140TA67 174 aa2.03□□□□□ -2.08
R3HDM1-202ENST00000409478 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.03□□□□□ -2.08
R3HDM1-202ENST00000409478 KRTAP4-8Q9BYQ9 185 aa2.03□□□□□ -2.08
R3HDM1-202ENST00000409478 USH2AO75445 5202 aa2.02□□□□□ -2.09
R3HDM1-202ENST00000409478 KRTAP9-3Q9BYQ3 159 aa2.01□□□□□ -2.09
R3HDM1-202ENST00000409478 KRTAP9-2Q9BYQ4 174 aa1.97□□□□□ -2.09
R3HDM1-202ENST00000409478 KRTAP4-12Q9BQ66 201 aa1.96□□□□□ -2.1
R3HDM1-202ENST00000409478 LCE3BQ5TA77 95 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms