RNA–Protein interactions for RNA: ENST00000409229.7

SLC3A1-202, Transcript of solute carrier family 3 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC3A1, Length 2,909 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-202ENST00000409229 DYNC2H1Q8NCM8 4307 aaKnown RBP5.83□□□□□ -1.48
SLC3A1-202ENST00000409229 STARD9Q9P2P6 4700 aa5.79□□□□□ -1.48
SLC3A1-202ENST00000409229 KRTAP10-1P60331 282 aa5.77□□□□□ -1.49
SLC3A1-202ENST00000409229 VPS13BQ7Z7G8 4022 aa5.76□□□□□ -1.49
SLC3A1-202ENST00000409229 KRTAP10-8P60410 259 aa5.74□□□□□ -1.49
SLC3A1-202ENST00000409229 RPS29P62273 56 aaKnown RBP5.73□□□□□ -1.49
SLC3A1-202ENST00000409229 DNAH5Q8TE73 4624 aa5.72□□□□□ -1.49
SLC3A1-202ENST00000409229 PRKDCP78527 4128 aaKnown RBP5.71□□□□□ -1.5
SLC3A1-202ENST00000409229 M0QZ58 72 aa5.64□□□□□ -1.51
SLC3A1-202ENST00000409229 FAT2Q9NYQ8 4349 aa5.6□□□□□ -1.51
SLC3A1-202ENST00000409229 PRO2289Q9P1D8 64 aa5.58□□□□□ -1.52
SLC3A1-202ENST00000409229 SMR3BP02814 79 aaPredicted RBP5.56□□□□□ -1.52
SLC3A1-202ENST00000409229 APOBP04114 4563 aaKnown RBP5.52□□□□□ -1.53
SLC3A1-202ENST00000409229 PKHD1P08F94 4074 aa5.51□□□□□ -1.53
SLC3A1-202ENST00000409229 R4GN34 69 aa5.49□□□□□ -1.53
SLC3A1-202ENST00000409229 PKD1P98161 4303 aa5.46□□□□□ -1.53
SLC3A1-202ENST00000409229 HSPG2P98160 4391 aa5.44□□□□□ -1.54
SLC3A1-202ENST00000409229 SACSQ9NZJ4 4579 aa5.44□□□□□ -1.54
SLC3A1-202ENST00000409229 PP632Q6XCG6 107 aa5.43□□□□□ -1.54
SLC3A1-202ENST00000409229 MYCBP2O75592 4640 aa5.4□□□□□ -1.55
SLC3A1-202ENST00000409229 FAT1Q14517 4588 aa5.39□□□□□ -1.55
SLC3A1-202ENST00000409229 PKHD1L1Q86WI1 4243 aa5.39□□□□□ -1.55
SLC3A1-202ENST00000409229 LRP1Q07954 4544 aaKnown RBP5.38□□□□□ -1.55
SLC3A1-202ENST00000409229 DYNC1H1Q14204 4646 aaKnown RBP5.34□□□□□ -1.55
SLC3A1-202ENST00000409229 HYDINQ4G0P3 5121 aa5.33□□□□□ -1.56
SLC3A1-202ENST00000409229 LORP23490 312 aaPredicted RBP5.3□□□□□ -1.56
SLC3A1-202ENST00000409229 FAT3Q8TDW7 4589 aa5.27□□□□□ -1.57
SLC3A1-202ENST00000409229 SPRR5A0A1B0GTR4 108 aa5.27□□□□□ -1.57
SLC3A1-202ENST00000409229 INE1O15225 51 aa5.26□□□□□ -1.57
SLC3A1-202ENST00000409229 KRTAP10-4P60372 401 aaPredicted RBP5.24□□□□□ -1.57
SLC3A1-202ENST00000409229 LPAP08519 4548 aa5.22□□□□□ -1.57
SLC3A1-202ENST00000409229 LCE2BO14633 110 aa5.17□□□□□ -1.58
SLC3A1-202ENST00000409229 TNXBP22105 4242 aa5.16□□□□□ -1.58
SLC3A1-202ENST00000409229 TNP1P09430 55 aa5.12□□□□□ -1.59
SLC3A1-202ENST00000409229 LRP2P98164 4655 aa5.08□□□□□ -1.6
SLC3A1-202ENST00000409229 KRTAP23-1A1A580 65 aa5.08□□□□□ -1.6
SLC3A1-202ENST00000409229 KMT2CQ8NEZ4 4911 aaKnown RBP5.01□□□□□ -1.61
SLC3A1-202ENST00000409229 Q5VSD8 79 aa4.9□□□□□ -1.62
SLC3A1-202ENST00000409229 A0A1B0GVY2 172 aa4.9□□□□□ -1.63
SLC3A1-202ENST00000409229 DNHD1Q96M86 4753 aa4.89□□□□□ -1.63
SLC3A1-202ENST00000409229 LCE2CQ5TA81 110 aa4.86□□□□□ -1.63
SLC3A1-202ENST00000409229 LCE3AQ5TA76 89 aa4.8□□□□□ -1.64
SLC3A1-202ENST00000409229 MT1HL1P0DM35 61 aa4.77□□□□□ -1.65
SLC3A1-202ENST00000409229 RYR1P21817 5038 aa4.75□□□□□ -1.65
SLC3A1-202ENST00000409229 KRTAP4-1Q9BYQ7 146 aa4.71□□□□□ -1.66
SLC3A1-202ENST00000409229 MUC17Q685J3 4493 aa4.67□□□□□ -1.66
SLC3A1-202ENST00000409229 KRTAP17-1Q9BYP8 105 aa4.66□□□□□ -1.66
SLC3A1-202ENST00000409229 LCE2AQ5TA79 106 aaPredicted RBP4.65□□□□□ -1.67
SLC3A1-202ENST00000409229 ABCA13Q86UQ4 5058 aa4.6□□□□□ -1.67
SLC3A1-202ENST00000409229 KRTAP19-2Q3LHN2 52 aa4.58□□□□□ -1.68
SLC3A1-202ENST00000409229 FLGP20930 4061 aaPredicted RBP4.57□□□□□ -1.68
SLC3A1-202ENST00000409229 KRTAP8-1Q8IUC2 63 aa4.57□□□□□ -1.68
SLC3A1-202ENST00000409229 KRTAP10-10P60014 251 aa4.56□□□□□ -1.68
SLC3A1-202ENST00000409229 KRTAP10-12P60413 245 aa4.54□□□□□ -1.68
SLC3A1-202ENST00000409229 KIAA1109Q2LD37 5005 aa4.53□□□□□ -1.68
SLC3A1-202ENST00000409229 RYR2Q92736 4967 aa4.52□□□□□ -1.69
SLC3A1-202ENST00000409229 KRTAP12-3P60328 96 aa4.52□□□□□ -1.69
SLC3A1-202ENST00000409229 MUC2Q02817 5179 aa4.51□□□□□ -1.69
SLC3A1-202ENST00000409229 RYR3Q15413 4870 aa4.43□□□□□ -1.7
SLC3A1-202ENST00000409229 HERC1Q15751 4861 aa4.42□□□□□ -1.7
SLC3A1-202ENST00000409229 KRTAP19-1Q8IUB9 90 aa4.42□□□□□ -1.7
SLC3A1-202ENST00000409229 SPRR2GQ9BYE4 73 aa4.41□□□□□ -1.7
SLC3A1-202ENST00000409229 PCLOQ9Y6V0 5065 aa4.4□□□□□ -1.71
SLC3A1-202ENST00000409229 KRTAP10-5P60370 271 aa4.32□□□□□ -1.72
SLC3A1-202ENST00000409229 EPPK1P58107 5090 aaKnown RBP4.32□□□□□ -1.72
SLC3A1-202ENST00000409229 LCE3CQ5T5A8 94 aa4.26□□□□□ -1.73
SLC3A1-202ENST00000409229 FAT4Q6V0I7 4981 aa4.26□□□□□ -1.73
SLC3A1-202ENST00000409229 KRTAP4-5Q9BYR2 181 aa4.25□□□□□ -1.73
SLC3A1-202ENST00000409229 M0R2T5 61 aa4.23□□□□□ -1.73
SLC3A1-202ENST00000409229 KRTAP10-7P60409 375 aaPredicted RBP4.22□□□□□ -1.73
SLC3A1-202ENST00000409229 KRTAP9-6A8MVA2 160 aa4.22□□□□□ -1.73
SLC3A1-202ENST00000409229 MT1XP80297 61 aa4.21□□□□□ -1.74
SLC3A1-202ENST00000409229 HMCN2Q8NDA2 5059 aa4.21□□□□□ -1.74
SLC3A1-202ENST00000409229 UBR4Q5T4S7 5183 aa4.2□□□□□ -1.74
SLC3A1-202ENST00000409229 KRTAP2-3P0C7H8 128 aa4.18□□□□□ -1.74
SLC3A1-202ENST00000409229 KRTAP2-4Q9BYR9 128 aa4.18□□□□□ -1.74
SLC3A1-202ENST00000409229 KRTAP2-1Q9BYU5 128 aa4.18□□□□□ -1.74
SLC3A1-202ENST00000409229 HERC2O95714 4834 aa4.17□□□□□ -1.74
SLC3A1-202ENST00000409229 KRTAP19-5Q3LI72 72 aa4.14□□□□□ -1.75
SLC3A1-202ENST00000409229 MT1FP04733 61 aa4.12□□□□□ -1.75
SLC3A1-202ENST00000409229 MT1BP07438 61 aa4.08□□□□□ -1.76
SLC3A1-202ENST00000409229 KRTAP19-8Q3LI54 63 aa4.08□□□□□ -1.76
SLC3A1-202ENST00000409229 MT2AP02795 61 aa4.07□□□□□ -1.76
SLC3A1-202ENST00000409229 KRTAP21-3Q3LHN1 58 aa4.03□□□□□ -1.76
SLC3A1-202ENST00000409229 KRTAP4-7Q9BYR0 210 aa4.03□□□□□ -1.76
SLC3A1-202ENST00000409229 BIRC6Q9NR09 4857 aa4.01□□□□□ -1.77
SLC3A1-202ENST00000409229 KMT2DO14686 5537 aa4□□□□□ -1.77
SLC3A1-202ENST00000409229 KRTAP12-4P60329 112 aa3.98□□□□□ -1.77
SLC3A1-202ENST00000409229 LOC100996750A0A140TA64 210 aa3.98□□□□□ -1.77
SLC3A1-202ENST00000409229 KRTAP4-6Q9BYQ5 205 aa3.98□□□□□ -1.77
SLC3A1-202ENST00000409229 RNF213Q63HN8 5207 aa3.97□□□□□ -1.77
SLC3A1-202ENST00000409229 MT1HP80294 61 aa3.95□□□□□ -1.78
SLC3A1-202ENST00000409229 KRTAP9-8Q9BYQ0 159 aa3.94□□□□□ -1.78
SLC3A1-202ENST00000409229 KRTAP2-2Q9BYT5 123 aa3.88□□□□□ -1.79
SLC3A1-202ENST00000409229 KRTAP4-8A0A0G2JLE6 195 aa3.88□□□□□ -1.79
SLC3A1-202ENST00000409229 KRTAP4-8Q9BYQ9 185 aa3.88□□□□□ -1.79
SLC3A1-202ENST00000409229 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.8□□□□□ -1.8
SLC3A1-202ENST00000409229 LCE1AQ5T7P2 110 aa3.75□□□□□ -1.81
SLC3A1-202ENST00000409229 KRTAP9-2Q9BYQ4 174 aa3.75□□□□□ -1.81
SLC3A1-202ENST00000409229 KRTAP9-6A0A140TA67 174 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms