RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 MUC17Q685J3 4493 aa2.21□□□□□ -2.06
RGPD4-201ENST00000408999 M0R2T5 61 aa2.21□□□□□ -2.06
RGPD4-201ENST00000408999 SPINK7P58062 85 aa2.2□□□□□ -2.06
RGPD4-201ENST00000408999 Q75L30 129 aa2.2□□□□□ -2.06
RGPD4-201ENST00000408999 ASB16-AS1Q495Z4 193 aa2.2□□□□□ -2.06
RGPD4-201ENST00000408999 A0A1B0GU33 70 aa2.2□□□□□ -2.06
RGPD4-201ENST00000408999 SEC61BP60468 96 aaKnown RBP2.19□□□□□ -2.06
RGPD4-201ENST00000408999 KTN1-AS1Q86SY8 53 aa2.19□□□□□ -2.06
RGPD4-201ENST00000408999 DSTQ03001 7570 aaKnown RBP2.19□□□□□ -2.06
RGPD4-201ENST00000408999 P0C880 135 aa2.19□□□□□ -2.06
RGPD4-201ENST00000408999 LINC01558Q9Y6Z2 57 aa2.19□□□□□ -2.06
RGPD4-201ENST00000408999 CSAG1Q6PB30 78 aa2.18□□□□□ -2.06
RGPD4-201ENST00000408999 KRTAP29-1A8MX34 341 aaPredicted RBP2.18□□□□□ -2.06
RGPD4-201ENST00000408999 KRTAP13-1Q8IUC0 172 aa2.18□□□□□ -2.06
RGPD4-201ENST00000408999 NOTCH2NLQ7Z3S9 236 aa2.17□□□□□ -2.06
RGPD4-201ENST00000408999 DMAC1Q96GE9 116 aa2.17□□□□□ -2.06
RGPD4-201ENST00000408999 SSPOA2VEC9 5147 aa2.16□□□□□ -2.06
RGPD4-201ENST00000408999 KRTAP13-2Q52LG2 175 aa2.16□□□□□ -2.06
RGPD4-201ENST00000408999 Q5VV11 94 aa2.16□□□□□ -2.06
RGPD4-201ENST00000408999 HERC2O95714 4834 aa2.16□□□□□ -2.06
RGPD4-201ENST00000408999 CAMK2N1Q7Z7J9 78 aa2.16□□□□□ -2.06
RGPD4-201ENST00000408999 LCE2DQ5TA82 110 aaPredicted RBP2.15□□□□□ -2.06
RGPD4-201ENST00000408999 KRTAP10-8P60410 259 aa2.14□□□□□ -2.07
RGPD4-201ENST00000408999 FCGBPQ9Y6R7 5405 aaPredicted RBP2.13□□□□□ -2.07
RGPD4-201ENST00000408999 A6NN06 94 aa2.13□□□□□ -2.07
RGPD4-201ENST00000408999 H1FX-AS1Q4G0G2 97 aa2.13□□□□□ -2.07
RGPD4-201ENST00000408999 R4GN34 69 aa2.13□□□□□ -2.07
RGPD4-201ENST00000408999 M0QZ58 72 aa2.12□□□□□ -2.07
RGPD4-201ENST00000408999 RPL37P61927 97 aaKnown RBP2.11□□□□□ -2.07
RGPD4-201ENST00000408999 KRTAP17-1Q9BYP8 105 aa2.11□□□□□ -2.07
RGPD4-201ENST00000408999 SPATA8Q6RVD6 105 aa2.1□□□□□ -2.07
RGPD4-201ENST00000408999 PRAC1Q96KF2 57 aa2.1□□□□□ -2.07
RGPD4-201ENST00000408999 KRTAP13-3Q3SY46 172 aa2.1□□□□□ -2.07
RGPD4-201ENST00000408999 ROMO1P60602 79 aa2.08□□□□□ -2.08
RGPD4-201ENST00000408999 H3BS24 57 aa2.08□□□□□ -2.08
RGPD4-201ENST00000408999 KRTAP1-4P0C5Y4 121 aa2.08□□□□□ -2.08
RGPD4-201ENST00000408999 PLAC4Q8WY50 150 aa2.07□□□□□ -2.08
RGPD4-201ENST00000408999 SYNE1Q8NF91 8797 aaKnown RBP2.06□□□□□ -2.08
RGPD4-201ENST00000408999 A8MUU9 505 aa2.06□□□□□ -2.08
RGPD4-201ENST00000408999 C20orf166-AS1Q96NR2 134 aa2.06□□□□□ -2.08
RGPD4-201ENST00000408999 LUZP6Q538Z0 58 aa2.05□□□□□ -2.08
RGPD4-201ENST00000408999 XP32Q5T750 250 aa2.04□□□□□ -2.08
RGPD4-201ENST00000408999 A0A1B0GVY2 172 aa2.04□□□□□ -2.08
RGPD4-201ENST00000408999 KRTAP16-1A8MUX0 517 aa2.02□□□□□ -2.09
RGPD4-201ENST00000408999 MUC12Q9UKN1 5478 aa2□□□□□ -2.09
RGPD4-201ENST00000408999 TPRXLQ17RH7 258 aa2□□□□□ -2.09
RGPD4-201ENST00000408999 MDN1Q9NU22 5596 aa1.97□□□□□ -2.09
RGPD4-201ENST00000408999 KRTAP25-1Q3LHN0 102 aa1.97□□□□□ -2.09
RGPD4-201ENST00000408999 KRTAP3-1Q9BYR8 98 aa1.96□□□□□ -2.1
RGPD4-201ENST00000408999 A0A0A0MQY5 61 aa1.94□□□□□ -2.1
RGPD4-201ENST00000408999 KRTAP13-4Q3LI77 160 aa1.94□□□□□ -2.1
RGPD4-201ENST00000408999 KRTAP3-2Q9BYR7 98 aa1.94□□□□□ -2.1
RGPD4-201ENST00000408999 TNP1P09430 55 aa1.93□□□□□ -2.1
RGPD4-201ENST00000408999 H0YAA0 97 aa1.93□□□□□ -2.1
RGPD4-201ENST00000408999 FSIP2Q5CZC0 6907 aa1.92□□□□□ -2.1
RGPD4-201ENST00000408999 KRTAP10-10P60014 251 aa1.9□□□□□ -2.1
RGPD4-201ENST00000408999 PP632Q6XCG6 107 aa1.9□□□□□ -2.11
RGPD4-201ENST00000408999 C10orf95Q9H7T3 257 aa1.88□□□□□ -2.11
RGPD4-201ENST00000408999 KRTAP3-3Q9BYR6 98 aa1.86□□□□□ -2.11
RGPD4-201ENST00000408999 KRTAP15-1Q3LI76 137 aa1.86□□□□□ -2.11
RGPD4-201ENST00000408999 PRO2289Q9P1D8 64 aa1.85□□□□□ -2.11
RGPD4-201ENST00000408999 KRTAP12-2P59991 146 aa1.84□□□□□ -2.11
RGPD4-201ENST00000408999 NDUFAF8A1L188 74 aa1.84□□□□□ -2.12
RGPD4-201ENST00000408999 KRTAP10-6P60371 365 aaPredicted RBP1.82□□□□□ -2.12
RGPD4-201ENST00000408999 KRTAP19-2Q3LHN2 52 aa1.82□□□□□ -2.12
RGPD4-201ENST00000408999 MT1HL1P0DM35 61 aa1.82□□□□□ -2.12
RGPD4-201ENST00000408999 KRTAP10-4P60372 401 aaPredicted RBP1.81□□□□□ -2.12
RGPD4-201ENST00000408999 KRTAP4-5Q9BYR2 181 aa1.8□□□□□ -2.12
RGPD4-201ENST00000408999 LCE2BO14633 110 aa1.79□□□□□ -2.12
RGPD4-201ENST00000408999 KRTAP12-1P59990 96 aa1.78□□□□□ -2.12
RGPD4-201ENST00000408999 KRTAP9-6A0A140TA67 174 aa1.78□□□□□ -2.12
RGPD4-201ENST00000408999 LCE2AQ5TA79 106 aaPredicted RBP1.78□□□□□ -2.12
RGPD4-201ENST00000408999 LORP23490 312 aaPredicted RBP1.76□□□□□ -2.13
RGPD4-201ENST00000408999 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
RGPD4-201ENST00000408999 LCE2CQ5TA81 110 aa1.71□□□□□ -2.14
RGPD4-201ENST00000408999 KRTAP23-1A1A580 65 aa1.7□□□□□ -2.14
RGPD4-201ENST00000408999 KRTAP9-6A8MVA2 160 aa1.69□□□□□ -2.14
RGPD4-201ENST00000408999 KRTAP10-12P60413 245 aa1.66□□□□□ -2.14
RGPD4-201ENST00000408999 SPRR5A0A1B0GTR4 108 aa1.63□□□□□ -2.15
RGPD4-201ENST00000408999 KRTAP4-1Q9BYQ7 146 aa1.63□□□□□ -2.15
RGPD4-201ENST00000408999 KRTAP9-2Q9BYQ4 174 aa1.62□□□□□ -2.15
RGPD4-201ENST00000408999 LCE3AQ5TA76 89 aa1.61□□□□□ -2.15
RGPD4-201ENST00000408999 MT1HP80294 61 aa1.61□□□□□ -2.15
RGPD4-201ENST00000408999 CRCT1Q9UGL9 99 aa1.6□□□□□ -2.15
RGPD4-201ENST00000408999 LOC100996750A0A140TA64 210 aa1.59□□□□□ -2.15
RGPD4-201ENST00000408999 KRTAP4-6Q9BYQ5 205 aa1.59□□□□□ -2.15
RGPD4-201ENST00000408999 KRTAP12-3P60328 96 aa1.59□□□□□ -2.16
RGPD4-201ENST00000408999 INE1O15225 51 aa1.56□□□□□ -2.16
RGPD4-201ENST00000408999 KRTAP19-4Q3LI73 84 aa1.56□□□□□ -2.16
RGPD4-201ENST00000408999 MT2AP02795 61 aa1.55□□□□□ -2.16
RGPD4-201ENST00000408999 KRTAP8-1Q8IUC2 63 aa1.54□□□□□ -2.16
RGPD4-201ENST00000408999 MT1FP04733 61 aa1.53□□□□□ -2.16
RGPD4-201ENST00000408999 SPRR2GQ9BYE4 73 aa1.53□□□□□ -2.17
RGPD4-201ENST00000408999 KRTAP9-7A8MTY7 169 aa1.5□□□□□ -2.17
RGPD4-201ENST00000408999 KRTAP9-8Q9BYQ0 159 aa1.49□□□□□ -2.17
RGPD4-201ENST00000408999 KRTAP19-5Q3LI72 72 aa1.46□□□□□ -2.17
RGPD4-201ENST00000408999 KRTAP4-7Q9BYR0 210 aa1.44□□□□□ -2.18
RGPD4-201ENST00000408999 SPRR2FQ96RM1 72 aa1.44□□□□□ -2.18
RGPD4-201ENST00000408999 KRTAP10-5P60370 271 aa1.44□□□□□ -2.18
RGPD4-201ENST00000408999 KRTAP19-8Q3LI54 63 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 267.1 ms