RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 A8MUN3 132 aa4.1□□□□□ -1.75
SNORD88A-201ENST00000408314 NDUFC1O43677 76 aa4.1□□□□□ -1.75
SNORD88A-201ENST00000408314 IMUPQ9GZP8 106 aa4.1□□□□□ -1.75
SNORD88A-201ENST00000408314 A6NN06 94 aa4.09□□□□□ -1.75
SNORD88A-201ENST00000408314 MP68P56378 58 aa4.08□□□□□ -1.76
SNORD88A-201ENST00000408314 KRTAP19-8Q3LI54 63 aa4.08□□□□□ -1.76
SNORD88A-201ENST00000408314 KRTAP6-3Q3LI67 103 aa4.07□□□□□ -1.76
SNORD88A-201ENST00000408314 KRTAP3-3Q9BYR6 98 aa4.06□□□□□ -1.76
SNORD88A-201ENST00000408314 H0YAA0 97 aa4.05□□□□□ -1.76
SNORD88A-201ENST00000408314 J3QR89 54 aa4.05□□□□□ -1.76
SNORD88A-201ENST00000408314 MT1BP07438 61 aa4.05□□□□□ -1.76
SNORD88A-201ENST00000408314 A0A087WVE0 104 aa4.04□□□□□ -1.76
SNORD88A-201ENST00000408314 LINC00208Q96KT6 92 aa4.04□□□□□ -1.76
SNORD88A-201ENST00000408314 H3BPC8 53 aa4.02□□□□□ -1.77
SNORD88A-201ENST00000408314 KRTAP10-5P60370 271 aa4□□□□□ -1.77
SNORD88A-201ENST00000408314 OCR1Q9BZK8 76 aa4□□□□□ -1.77
SNORD88A-201ENST00000408314 C20orf197Q8N268 126 aa3.99□□□□□ -1.77
SNORD88A-201ENST00000408314 A0A1B0GV90 55 aa3.97□□□□□ -1.77
SNORD88A-201ENST00000408314 SCGB1A1P11684 91 aa3.97□□□□□ -1.77
SNORD88A-201ENST00000408314 ADM2Q7Z4H4 148 aa3.97□□□□□ -1.77
SNORD88A-201ENST00000408314 PRO2289Q9P1D8 64 aa3.94□□□□□ -1.78
SNORD88A-201ENST00000408314 DMAC1Q96GE9 116 aa3.93□□□□□ -1.78
SNORD88A-201ENST00000408314 R4GN34 69 aa3.92□□□□□ -1.78
SNORD88A-201ENST00000408314 NEBP20929 6669 aa3.91□□□□□ -1.78
SNORD88A-201ENST00000408314 PLAC4Q8WY50 150 aa3.91□□□□□ -1.78
SNORD88A-201ENST00000408314 SMIM20Q8N5G0 67 aa3.9□□□□□ -1.79
SNORD88A-201ENST00000408314 MUC12Q9UKN1 5478 aa3.88□□□□□ -1.79
SNORD88A-201ENST00000408314 TRAV7A0A075B6U4 112 aa3.88□□□□□ -1.79
SNORD88A-201ENST00000408314 SPTSSBQ8NFR3 76 aa3.88□□□□□ -1.79
SNORD88A-201ENST00000408314 KRTAP5-9P26371 169 aa3.87□□□□□ -1.79
SNORD88A-201ENST00000408314 M0QZ58 72 aa3.86□□□□□ -1.79
SNORD88A-201ENST00000408314 ACYP2P14621 99 aa3.86□□□□□ -1.79
SNORD88A-201ENST00000408314 K7ERU9 68 aa3.84□□□□□ -1.79
SNORD88A-201ENST00000408314 P0C880 135 aa3.83□□□□□ -1.8
SNORD88A-201ENST00000408314 KMT2DO14686 5537 aa3.82□□□□□ -1.8
SNORD88A-201ENST00000408314 CHKB-CPT1BH3BT56 60 aa3.81□□□□□ -1.8
SNORD88A-201ENST00000408314 MT1XP80297 61 aa3.8□□□□□ -1.8
SNORD88A-201ENST00000408314 MDN1Q9NU22 5596 aa3.8□□□□□ -1.8
SNORD88A-201ENST00000408314 KRTAP20-1Q3LI63 56 aa3.79□□□□□ -1.8
SNORD88A-201ENST00000408314 LINC01554Q52M75 96 aa3.79□□□□□ -1.8
SNORD88A-201ENST00000408314 MT-ATP8P03928 68 aa3.78□□□□□ -1.8
SNORD88A-201ENST00000408314 KRTAP3-2Q9BYR7 98 aa3.78□□□□□ -1.8
SNORD88A-201ENST00000408314 KRTAP12-2P59991 146 aa3.77□□□□□ -1.81
SNORD88A-201ENST00000408314 KRTAP8-1Q8IUC2 63 aa3.75□□□□□ -1.81
SNORD88A-201ENST00000408314 SPRR2FQ96RM1 72 aa3.75□□□□□ -1.81
SNORD88A-201ENST00000408314 SPANXA2-OT1Q8N9U9 137 aa3.74□□□□□ -1.81
SNORD88A-201ENST00000408314 SNURFQ9Y675 71 aa3.71□□□□□ -1.82
SNORD88A-201ENST00000408314 SPRR2EP22531 72 aa3.7□□□□□ -1.82
SNORD88A-201ENST00000408314 SPRR2BP35325 72 aa3.7□□□□□ -1.82
SNORD88A-201ENST00000408314 SPRR2AP35326 72 aa3.7□□□□□ -1.82
SNORD88A-201ENST00000408314 SERP2Q8N6R1 65 aa3.69□□□□□ -1.82
SNORD88A-201ENST00000408314 KRTAP2-3P0C7H8 128 aa3.68□□□□□ -1.82
SNORD88A-201ENST00000408314 KRTAP2-4Q9BYR9 128 aa3.68□□□□□ -1.82
SNORD88A-201ENST00000408314 SEC61GP60059 68 aa3.63□□□□□ -1.83
SNORD88A-201ENST00000408314 KRTAP10-12P60413 245 aa3.63□□□□□ -1.83
SNORD88A-201ENST00000408314 LCE1AQ5T7P2 110 aa3.62□□□□□ -1.83
SNORD88A-201ENST00000408314 CAMK2N1Q7Z7J9 78 aa3.62□□□□□ -1.83
SNORD88A-201ENST00000408314 KRTAP10-7P60409 375 aaPredicted RBP3.61□□□□□ -1.83
SNORD88A-201ENST00000408314 SERP1Q9Y6X1 66 aa3.61□□□□□ -1.83
SNORD88A-201ENST00000408314 KRTAP4-8A0A0G2JLE6 195 aa3.6□□□□□ -1.83
SNORD88A-201ENST00000408314 COA5Q86WW8 74 aa3.6□□□□□ -1.83
SNORD88A-201ENST00000408314 KRTAP4-8Q9BYQ9 185 aa3.6□□□□□ -1.83
SNORD88A-201ENST00000408314 SPRR2DP22532 72 aa3.59□□□□□ -1.83
SNORD88A-201ENST00000408314 KRTAP2-2Q9BYT5 123 aa3.57□□□□□ -1.84
SNORD88A-201ENST00000408314 KRTAP2-1Q9BYU5 128 aa3.57□□□□□ -1.84
SNORD88A-201ENST00000408314 COX7CP15954 63 aa3.56□□□□□ -1.84
SNORD88A-201ENST00000408314 KRTAP13-4Q3LI77 160 aa3.54□□□□□ -1.84
SNORD88A-201ENST00000408314 A0A1B0GU33 70 aa3.5□□□□□ -1.85
SNORD88A-201ENST00000408314 A0A0D9SG42 100 aa3.49□□□□□ -1.85
SNORD88A-201ENST00000408314 H7BZZ5 65 aa3.48□□□□□ -1.85
SNORD88A-201ENST00000408314 LCE3BQ5TA77 95 aa3.48□□□□□ -1.85
SNORD88A-201ENST00000408314 SPINT4Q6UDR6 99 aa3.47□□□□□ -1.85
SNORD88A-201ENST00000408314 SMIM26A0A096LP01 95 aa3.46□□□□□ -1.86
SNORD88A-201ENST00000408314 A0A1B0GU69 56 aa3.46□□□□□ -1.86
SNORD88A-201ENST00000408314 SPATA8Q6RVD6 105 aa3.45□□□□□ -1.86
SNORD88A-201ENST00000408314 ANAPC13Q9BS18 74 aa3.43□□□□□ -1.86
SNORD88A-201ENST00000408314 CYSTM1Q9H1C7 97 aa3.41□□□□□ -1.86
SNORD88A-201ENST00000408314 ATP5EP56381 51 aaPredicted RBP3.4□□□□□ -1.87
SNORD88A-201ENST00000408314 KRTAP12-1P59990 96 aa3.4□□□□□ -1.87
SNORD88A-201ENST00000408314 PRR15LQ9BU68 103 aa3.4□□□□□ -1.87
SNORD88A-201ENST00000408314 MT1EP04732 61 aa3.38□□□□□ -1.87
SNORD88A-201ENST00000408314 KRTAP19-7Q3SYF9 63 aa3.38□□□□□ -1.87
SNORD88A-201ENST00000408314 KRTAP19-3Q7Z4W3 81 aa3.38□□□□□ -1.87
SNORD88A-201ENST00000408314 LCE5AQ5TCM9 118 aa3.37□□□□□ -1.87
SNORD88A-201ENST00000408314 DSTQ03001 7570 aaKnown RBP3.35□□□□□ -1.87
SNORD88A-201ENST00000408314 PP632Q6XCG6 107 aa3.35□□□□□ -1.87
SNORD88A-201ENST00000408314 TNP1P09430 55 aa3.33□□□□□ -1.88
SNORD88A-201ENST00000408314 MT1GP13640 62 aa3.32□□□□□ -1.88
SNORD88A-201ENST00000408314 A8MU10 97 aa3.31□□□□□ -1.88
SNORD88A-201ENST00000408314 KRTAP19-5Q3LI72 72 aa3.31□□□□□ -1.88
SNORD88A-201ENST00000408314 CCDC179H3BU77 68 aa3.29□□□□□ -1.88
SNORD88A-201ENST00000408314 LINC01558Q9Y6Z2 57 aa3.27□□□□□ -1.89
SNORD88A-201ENST00000408314 GPR98Q8WXG9 6306 aa3.27□□□□□ -1.89
SNORD88A-201ENST00000408314 TMEM258P61165 79 aa3.26□□□□□ -1.89
SNORD88A-201ENST00000408314 UQCR11O14957 56 aa3.25□□□□□ -1.89
SNORD88A-201ENST00000408314 C10orf95Q9H7T3 257 aa3.24□□□□□ -1.89
SNORD88A-201ENST00000408314 LCE3AQ5TA76 89 aa3.23□□□□□ -1.89
SNORD88A-201ENST00000408314 MT1LQ93083 61 aa3.23□□□□□ -1.89
SNORD88A-201ENST00000408314 MT1MQ8N339 61 aa3.22□□□□□ -1.89
SNORD88A-201ENST00000408314 LCE4AQ5TA78 99 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms