RNA–Protein interactions for RNA: ENST00000406921.7

ITSN2-203, Transcript of intersectin 2, humanhuman

TSL 1 (best) BASIC

Gene ITSN2, Length 4,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-203ENST00000406921 DNAH11Q96DT5 4516 aa7.06□□□□□ -1.28
ITSN2-203ENST00000406921 DNAH7Q8WXX0 4024 aa7.06□□□□□ -1.28
ITSN2-203ENST00000406921 KRTAP13-4Q3LI77 160 aa7.05□□□□□ -1.28
ITSN2-203ENST00000406921 DNAH3Q8TD57 4116 aa7.05□□□□□ -1.28
ITSN2-203ENST00000406921 KRTAP10-6P60371 365 aaPredicted RBP7.03□□□□□ -1.28
ITSN2-203ENST00000406921 FRAS1Q86XX4 4008 aa6.98□□□□□ -1.29
ITSN2-203ENST00000406921 FAT1Q14517 4588 aa6.96□□□□□ -1.3
ITSN2-203ENST00000406921 RYR1P21817 5038 aa6.91□□□□□ -1.3
ITSN2-203ENST00000406921 KRTAP3-3Q9BYR6 98 aa6.89□□□□□ -1.31
ITSN2-203ENST00000406921 DNAH8Q96JB1 4490 aa6.88□□□□□ -1.31
ITSN2-203ENST00000406921 STARD9Q9P2P6 4700 aa6.88□□□□□ -1.31
ITSN2-203ENST00000406921 PRKDCP78527 4128 aaKnown RBP6.84□□□□□ -1.31
ITSN2-203ENST00000406921 KMT2AQ03164 3969 aa6.84□□□□□ -1.31
ITSN2-203ENST00000406921 KRTAP3-2Q9BYR7 98 aa6.82□□□□□ -1.32
ITSN2-203ENST00000406921 DYNC1H1Q14204 4646 aaKnown RBP6.82□□□□□ -1.32
ITSN2-203ENST00000406921 HECTD4Q9Y4D8 3996 aa6.82□□□□□ -1.32
ITSN2-203ENST00000406921 KIAA1109Q2LD37 5005 aa6.81□□□□□ -1.32
ITSN2-203ENST00000406921 DNAH17Q9UFH2 4485 aa6.79□□□□□ -1.32
ITSN2-203ENST00000406921 VPS13DQ5THJ4 4388 aa6.76□□□□□ -1.33
ITSN2-203ENST00000406921 LRP1BQ9NZR2 4599 aa6.75□□□□□ -1.33
ITSN2-203ENST00000406921 DNAH2Q9P225 4427 aa6.74□□□□□ -1.33
ITSN2-203ENST00000406921 ALMS1Q8TCU4 4167 aa6.74□□□□□ -1.33
ITSN2-203ENST00000406921 DYNC2H1Q8NCM8 4307 aaKnown RBP6.73□□□□□ -1.33
ITSN2-203ENST00000406921 DNAH6Q9C0G6 4158 aa6.71□□□□□ -1.34
ITSN2-203ENST00000406921 MYCBP2O75592 4640 aa6.67□□□□□ -1.34
ITSN2-203ENST00000406921 LORP23490 312 aaPredicted RBP6.64□□□□□ -1.35
ITSN2-203ENST00000406921 RYR3Q15413 4870 aa6.61□□□□□ -1.35
ITSN2-203ENST00000406921 SACSQ9NZJ4 4579 aa6.61□□□□□ -1.35
ITSN2-203ENST00000406921 KRTAP15-1Q3LI76 137 aa6.59□□□□□ -1.35
ITSN2-203ENST00000406921 KRTAP4-1Q9BYQ7 146 aa6.58□□□□□ -1.36
ITSN2-203ENST00000406921 VPS13BQ7Z7G8 4022 aa6.53□□□□□ -1.36
ITSN2-203ENST00000406921 FAT3Q8TDW7 4589 aa6.52□□□□□ -1.37
ITSN2-203ENST00000406921 KRTAP10-12P60413 245 aa6.48□□□□□ -1.37
ITSN2-203ENST00000406921 HYDINQ4G0P3 5121 aa6.47□□□□□ -1.37
ITSN2-203ENST00000406921 FAT2Q9NYQ8 4349 aa6.43□□□□□ -1.38
ITSN2-203ENST00000406921 LRP1Q07954 4544 aaKnown RBP6.42□□□□□ -1.38
ITSN2-203ENST00000406921 APOBP04114 4563 aaKnown RBP6.42□□□□□ -1.38
ITSN2-203ENST00000406921 KRTAP17-1Q9BYP8 105 aa6.39□□□□□ -1.39
ITSN2-203ENST00000406921 CRCT1Q9UGL9 99 aa6.39□□□□□ -1.39
ITSN2-203ENST00000406921 PKD1P98161 4303 aa6.34□□□□□ -1.39
ITSN2-203ENST00000406921 PKHD1P08F94 4074 aa6.33□□□□□ -1.4
ITSN2-203ENST00000406921 HERC2O95714 4834 aa6.32□□□□□ -1.4
ITSN2-203ENST00000406921 MT1HP80294 61 aa6.31□□□□□ -1.4
ITSN2-203ENST00000406921 KRTAP12-3P60328 96 aa6.3□□□□□ -1.4
ITSN2-203ENST00000406921 LCE3AQ5TA76 89 aa6.29□□□□□ -1.4
ITSN2-203ENST00000406921 MT2AP02795 61 aa6.22□□□□□ -1.41
ITSN2-203ENST00000406921 LRP2P98164 4655 aa6.21□□□□□ -1.42
ITSN2-203ENST00000406921 RYR2Q92736 4967 aa6.19□□□□□ -1.42
ITSN2-203ENST00000406921 MT1FP04733 61 aa6.14□□□□□ -1.43
ITSN2-203ENST00000406921 PCLOQ9Y6V0 5065 aa6.11□□□□□ -1.43
ITSN2-203ENST00000406921 KMT2CQ8NEZ4 4911 aaKnown RBP6.09□□□□□ -1.43
ITSN2-203ENST00000406921 KRTAP8-1Q8IUC2 63 aa6.09□□□□□ -1.43
ITSN2-203ENST00000406921 SPRR2GQ9BYE4 73 aa6.03□□□□□ -1.44
ITSN2-203ENST00000406921 BIRC6Q9NR09 4857 aa6.02□□□□□ -1.45
ITSN2-203ENST00000406921 KRTAP23-1A1A580 65 aa5.99□□□□□ -1.45
ITSN2-203ENST00000406921 PKHD1L1Q86WI1 4243 aa5.98□□□□□ -1.45
ITSN2-203ENST00000406921 HSPG2P98160 4391 aa5.98□□□□□ -1.45
ITSN2-203ENST00000406921 INE1O15225 51 aa5.85□□□□□ -1.47
ITSN2-203ENST00000406921 TNXBP22105 4242 aa5.84□□□□□ -1.47
ITSN2-203ENST00000406921 KRTAP19-1Q8IUB9 90 aa5.83□□□□□ -1.48
ITSN2-203ENST00000406921 HERC1Q15751 4861 aa5.83□□□□□ -1.48
ITSN2-203ENST00000406921 FSIP2Q5CZC0 6907 aa5.82□□□□□ -1.48
ITSN2-203ENST00000406921 EPPK1P58107 5090 aaKnown RBP5.81□□□□□ -1.48
ITSN2-203ENST00000406921 LPAP08519 4548 aa5.8□□□□□ -1.48
ITSN2-203ENST00000406921 SPRR2FQ96RM1 72 aa5.79□□□□□ -1.48
ITSN2-203ENST00000406921 ABCA13Q86UQ4 5058 aa5.77□□□□□ -1.49
ITSN2-203ENST00000406921 KRTAP10-5P60370 271 aa5.75□□□□□ -1.49
ITSN2-203ENST00000406921 KRTAP19-5Q3LI72 72 aa5.74□□□□□ -1.49
ITSN2-203ENST00000406921 UBR4Q5T4S7 5183 aa5.72□□□□□ -1.49
ITSN2-203ENST00000406921 LCE2CQ5TA81 110 aa5.68□□□□□ -1.5
ITSN2-203ENST00000406921 KRTAP9-8Q9BYQ0 159 aa5.67□□□□□ -1.5
ITSN2-203ENST00000406921 KRTAP10-7P60409 375 aaPredicted RBP5.67□□□□□ -1.5
ITSN2-203ENST00000406921 KRTAP19-8Q3LI54 63 aa5.64□□□□□ -1.51
ITSN2-203ENST00000406921 MT1BP07438 61 aa5.59□□□□□ -1.51
ITSN2-203ENST00000406921 MT1XP80297 61 aa5.57□□□□□ -1.52
ITSN2-203ENST00000406921 SYNE1Q8NF91 8797 aaKnown RBP5.56□□□□□ -1.52
ITSN2-203ENST00000406921 RNF213Q63HN8 5207 aa5.55□□□□□ -1.52
ITSN2-203ENST00000406921 KRTAP4-8A0A0G2JLE6 195 aa5.51□□□□□ -1.53
ITSN2-203ENST00000406921 KRTAP4-8Q9BYQ9 185 aa5.51□□□□□ -1.53
ITSN2-203ENST00000406921 KRTAP9-3Q9BYQ3 159 aa5.5□□□□□ -1.53
ITSN2-203ENST00000406921 LCE3CQ5T5A8 94 aa5.5□□□□□ -1.53
ITSN2-203ENST00000406921 KRTAP19-2Q3LHN2 52 aa5.47□□□□□ -1.53
ITSN2-203ENST00000406921 MUC17Q685J3 4493 aa5.43□□□□□ -1.54
ITSN2-203ENST00000406921 FAT4Q6V0I7 4981 aa5.42□□□□□ -1.54
ITSN2-203ENST00000406921 MUC2Q02817 5179 aa5.37□□□□□ -1.55
ITSN2-203ENST00000406921 LCE2BO14633 110 aa5.37□□□□□ -1.55
ITSN2-203ENST00000406921 SPRR2EP22531 72 aa5.35□□□□□ -1.55
ITSN2-203ENST00000406921 SPRR2BP35325 72 aa5.35□□□□□ -1.55
ITSN2-203ENST00000406921 SPRR2AP35326 72 aa5.35□□□□□ -1.55
ITSN2-203ENST00000406921 FLGP20930 4061 aaPredicted RBP5.3□□□□□ -1.56
ITSN2-203ENST00000406921 MT1GP13640 62 aa5.25□□□□□ -1.57
ITSN2-203ENST00000406921 HMCN2Q8NDA2 5059 aa5.22□□□□□ -1.57
ITSN2-203ENST00000406921 OBSCNQ5VST9 7968 aa5.22□□□□□ -1.57
ITSN2-203ENST00000406921 LCE3BQ5TA77 95 aa5.17□□□□□ -1.58
ITSN2-203ENST00000406921 SPRR2DP22532 72 aa5.14□□□□□ -1.59
ITSN2-203ENST00000406921 KRTAP4-7Q9BYR0 210 aa5.14□□□□□ -1.59
ITSN2-203ENST00000406921 KRTAP19-4Q3LI73 84 aa5.13□□□□□ -1.59
ITSN2-203ENST00000406921 LCE2AQ5TA79 106 aaPredicted RBP5.05□□□□□ -1.6
ITSN2-203ENST00000406921 KRTAP9-2Q9BYQ4 174 aa5.04□□□□□ -1.6
ITSN2-203ENST00000406921 KRTAP19-3Q7Z4W3 81 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms