RNA–Protein interactions for RNA: ENST00000406772.5

GGA1-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2 BASIC

Gene GGA1, Length 3,205 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-206ENST00000406772 S4R3F8 94 aa7.62□□□□□ -1.19
GGA1-206ENST00000406772 SACSQ9NZJ4 4579 aa7.62□□□□□ -1.19
GGA1-206ENST00000406772 TPRXLQ17RH7 258 aa7.61□□□□□ -1.19
GGA1-206ENST00000406772 KRTAP10-8P60410 259 aa7.6□□□□□ -1.19
GGA1-206ENST00000406772 LRP1Q07954 4544 aaKnown RBP7.6□□□□□ -1.19
GGA1-206ENST00000406772 KRTAP10-6P60371 365 aaPredicted RBP7.59□□□□□ -1.19
GGA1-206ENST00000406772 KRTAP3-3Q9BYR6 98 aa7.54□□□□□ -1.2
GGA1-206ENST00000406772 NDUFAF8A1L188 74 aa7.53□□□□□ -1.2
GGA1-206ENST00000406772 APOBP04114 4563 aaKnown RBP7.51□□□□□ -1.21
GGA1-206ENST00000406772 KRTAP12-2P59991 146 aa7.49□□□□□ -1.21
GGA1-206ENST00000406772 KRTAP3-2Q9BYR7 98 aa7.48□□□□□ -1.21
GGA1-206ENST00000406772 KRTAP10-4P60372 401 aaPredicted RBP7.46□□□□□ -1.21
GGA1-206ENST00000406772 HSPG2P98160 4391 aa7.45□□□□□ -1.22
GGA1-206ENST00000406772 XP32Q5T750 250 aa7.44□□□□□ -1.22
GGA1-206ENST00000406772 Q5VSD8 79 aa7.4□□□□□ -1.22
GGA1-206ENST00000406772 PKHD1L1Q86WI1 4243 aa7.4□□□□□ -1.23
GGA1-206ENST00000406772 FAT3Q8TDW7 4589 aa7.39□□□□□ -1.23
GGA1-206ENST00000406772 KMT2CQ8NEZ4 4911 aaKnown RBP7.39□□□□□ -1.23
GGA1-206ENST00000406772 A0A1B0GVY2 172 aa7.37□□□□□ -1.23
GGA1-206ENST00000406772 KRTAP12-1P59990 96 aa7.33□□□□□ -1.24
GGA1-206ENST00000406772 M0QZ58 72 aa7.29□□□□□ -1.24
GGA1-206ENST00000406772 RYR2Q92736 4967 aa7.27□□□□□ -1.25
GGA1-206ENST00000406772 LPAP08519 4548 aa7.27□□□□□ -1.25
GGA1-206ENST00000406772 LRP2P98164 4655 aa7.23□□□□□ -1.25
GGA1-206ENST00000406772 R4GN34 69 aa7.23□□□□□ -1.25
GGA1-206ENST00000406772 KRTAP15-1Q3LI76 137 aa7.22□□□□□ -1.25
GGA1-206ENST00000406772 KIAA1109Q2LD37 5005 aa7.22□□□□□ -1.25
GGA1-206ENST00000406772 TNXBP22105 4242 aa7.19□□□□□ -1.26
GGA1-206ENST00000406772 KRTAP17-1Q9BYP8 105 aa7.18□□□□□ -1.26
GGA1-206ENST00000406772 RYR3Q15413 4870 aa7.11□□□□□ -1.27
GGA1-206ENST00000406772 RYR1P21817 5038 aa7.11□□□□□ -1.27
GGA1-206ENST00000406772 LUZP6Q538Z0 58 aa7.03□□□□□ -1.28
GGA1-206ENST00000406772 MT1HL1P0DM35 61 aa7.02□□□□□ -1.29
GGA1-206ENST00000406772 LORP23490 312 aaPredicted RBP7.01□□□□□ -1.29
GGA1-206ENST00000406772 CAMK2N1Q7Z7J9 78 aa7.01□□□□□ -1.29
GGA1-206ENST00000406772 PLAC4Q8WY50 150 aa6.98□□□□□ -1.29
GGA1-206ENST00000406772 ABCA13Q86UQ4 5058 aa6.97□□□□□ -1.29
GGA1-206ENST00000406772 EPPK1P58107 5090 aaKnown RBP6.87□□□□□ -1.31
GGA1-206ENST00000406772 KRTAP4-5Q9BYR2 181 aa6.84□□□□□ -1.32
GGA1-206ENST00000406772 KRTAP21-3Q3LHN1 58 aa6.8□□□□□ -1.32
GGA1-206ENST00000406772 SEC61BP60468 96 aaKnown RBP6.79□□□□□ -1.32
GGA1-206ENST00000406772 J3QL48 77 aa6.78□□□□□ -1.32
GGA1-206ENST00000406772 MUC2Q02817 5179 aa6.75□□□□□ -1.33
GGA1-206ENST00000406772 KRTAP4-1Q9BYQ7 146 aa6.74□□□□□ -1.33
GGA1-206ENST00000406772 PP632Q6XCG6 107 aa6.57□□□□□ -1.36
GGA1-206ENST00000406772 MUC17Q685J3 4493 aa6.57□□□□□ -1.36
GGA1-206ENST00000406772 TNP1P09430 55 aa6.56□□□□□ -1.36
GGA1-206ENST00000406772 HERC2O95714 4834 aa6.52□□□□□ -1.37
GGA1-206ENST00000406772 M0R2T5 61 aa6.42□□□□□ -1.38
GGA1-206ENST00000406772 FAT4Q6V0I7 4981 aa6.42□□□□□ -1.38
GGA1-206ENST00000406772 HERC1Q15751 4861 aa6.34□□□□□ -1.39
GGA1-206ENST00000406772 PCLOQ9Y6V0 5065 aa6.34□□□□□ -1.39
GGA1-206ENST00000406772 KRTAP19-2Q3LHN2 52 aa6.33□□□□□ -1.4
GGA1-206ENST00000406772 RNF213Q63HN8 5207 aa6.26□□□□□ -1.41
GGA1-206ENST00000406772 FLGP20930 4061 aaPredicted RBP6.23□□□□□ -1.41
GGA1-206ENST00000406772 LCE3AQ5TA76 89 aa6.2□□□□□ -1.42
GGA1-206ENST00000406772 KRTAP10-10P60014 251 aa6.16□□□□□ -1.42
GGA1-206ENST00000406772 BIRC6Q9NR09 4857 aa6.13□□□□□ -1.43
GGA1-206ENST00000406772 SPRR5A0A1B0GTR4 108 aa6.05□□□□□ -1.44
GGA1-206ENST00000406772 KRTAP19-1Q8IUB9 90 aa6.05□□□□□ -1.44
GGA1-206ENST00000406772 HMCN2Q8NDA2 5059 aa6.04□□□□□ -1.44
GGA1-206ENST00000406772 UBR4Q5T4S7 5183 aa6.03□□□□□ -1.44
GGA1-206ENST00000406772 KRTAP23-1A1A580 65 aa6□□□□□ -1.45
GGA1-206ENST00000406772 SPRR2GQ9BYE4 73 aa5.97□□□□□ -1.45
GGA1-206ENST00000406772 LCE2CQ5TA81 110 aa5.97□□□□□ -1.45
GGA1-206ENST00000406772 MT1FP04733 61 aa5.94□□□□□ -1.46
GGA1-206ENST00000406772 MT2AP02795 61 aa5.88□□□□□ -1.47
GGA1-206ENST00000406772 MT1HP80294 61 aa5.88□□□□□ -1.47
GGA1-206ENST00000406772 KRTAP12-3P60328 96 aa5.85□□□□□ -1.47
GGA1-206ENST00000406772 KRTAP10-12P60413 245 aa5.83□□□□□ -1.48
GGA1-206ENST00000406772 PRO2289Q9P1D8 64 aa5.8□□□□□ -1.48
GGA1-206ENST00000406772 KRTAP8-1Q8IUC2 63 aa5.77□□□□□ -1.49
GGA1-206ENST00000406772 KRTAP10-7P60409 375 aaPredicted RBP5.74□□□□□ -1.49
GGA1-206ENST00000406772 KRTAP10-5P60370 271 aa5.73□□□□□ -1.49
GGA1-206ENST00000406772 MT1XP80297 61 aa5.73□□□□□ -1.49
GGA1-206ENST00000406772 KRTAP9-8Q9BYQ0 159 aa5.71□□□□□ -1.49
GGA1-206ENST00000406772 KMT2DO14686 5537 aa5.69□□□□□ -1.5
GGA1-206ENST00000406772 MT1BP07438 61 aa5.69□□□□□ -1.5
GGA1-206ENST00000406772 USH2AO75445 5202 aa5.68□□□□□ -1.5
GGA1-206ENST00000406772 INE1O15225 51 aa5.64□□□□□ -1.51
GGA1-206ENST00000406772 KRTAP19-8Q3LI54 63 aa5.6□□□□□ -1.51
GGA1-206ENST00000406772 KRTAP19-5Q3LI72 72 aa5.54□□□□□ -1.52
GGA1-206ENST00000406772 KRTAP4-8A0A0G2JLE6 195 aa5.46□□□□□ -1.53
GGA1-206ENST00000406772 KRTAP4-8Q9BYQ9 185 aa5.46□□□□□ -1.53
GGA1-206ENST00000406772 KRTAP9-3Q9BYQ3 159 aa5.44□□□□□ -1.54
GGA1-206ENST00000406772 LCE3CQ5T5A8 94 aa5.42□□□□□ -1.54
GGA1-206ENST00000406772 KRTAP4-7Q9BYR0 210 aa5.4□□□□□ -1.55
GGA1-206ENST00000406772 FSIP2Q5CZC0 6907 aa5.32□□□□□ -1.56
GGA1-206ENST00000406772 KRTAP9-6A8MVA2 160 aa5.31□□□□□ -1.56
GGA1-206ENST00000406772 LCE2BO14633 110 aa5.31□□□□□ -1.56
GGA1-206ENST00000406772 CRCT1Q9UGL9 99 aa5.18□□□□□ -1.58
GGA1-206ENST00000406772 KRTAP19-7Q3SYF9 63 aa5.08□□□□□ -1.6
GGA1-206ENST00000406772 DSTQ03001 7570 aaKnown RBP5.07□□□□□ -1.6
GGA1-206ENST00000406772 FCGBPQ9Y6R7 5405 aaPredicted RBP5.01□□□□□ -1.61
GGA1-206ENST00000406772 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
GGA1-206ENST00000406772 KRTAP4-3Q9BYR4 195 aa4.99□□□□□ -1.61
GGA1-206ENST00000406772 KRTAP2-3P0C7H8 128 aa4.98□□□□□ -1.61
GGA1-206ENST00000406772 KRTAP2-4Q9BYR9 128 aa4.98□□□□□ -1.61
GGA1-206ENST00000406772 KRTAP2-1Q9BYU5 128 aa4.98□□□□□ -1.61
GGA1-206ENST00000406772 MT1LQ93083 61 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms