RNA–Protein interactions for RNA: ENST00000406610.6

PARD3B-204, Transcript of par-3 family cell polarity regulator beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PARD3B, Length 8,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD3B-204ENST00000406610 ANK3Q12955 4377 aaKnown RBP6.24□□□□□ -1.41
PARD3B-204ENST00000406610 KRTAP4-5Q9BYR2 181 aa6.22□□□□□ -1.41
PARD3B-204ENST00000406610 HUWE1Q7Z6Z7 4374 aaKnown RBP6.18□□□□□ -1.42
PARD3B-204ENST00000406610 ZNF469Q96JG9 3925 aaPredicted RBP6.14□□□□□ -1.43
PARD3B-204ENST00000406610 ALMS1Q8TCU4 4167 aa6.12□□□□□ -1.43
PARD3B-204ENST00000406610 KRTAP10-7P60409 375 aaPredicted RBP6□□□□□ -1.45
PARD3B-204ENST00000406610 DNAH2Q9P225 4427 aa5.99□□□□□ -1.45
PARD3B-204ENST00000406610 KRTAP10-4P60372 401 aaPredicted RBP5.97□□□□□ -1.45
PARD3B-204ENST00000406610 LYSTQ99698 3801 aa5.95□□□□□ -1.46
PARD3B-204ENST00000406610 FRAS1Q86XX4 4008 aa5.91□□□□□ -1.46
PARD3B-204ENST00000406610 SPRR2FQ96RM1 72 aa5.89□□□□□ -1.47
PARD3B-204ENST00000406610 DNAH1Q9P2D7 4330 aa5.87□□□□□ -1.47
PARD3B-204ENST00000406610 ANK2Q01484 3957 aa5.82□□□□□ -1.48
PARD3B-204ENST00000406610 DNAH3Q8TD57 4116 aa5.81□□□□□ -1.48
PARD3B-204ENST00000406610 VPS13BQ7Z7G8 4022 aa5.8□□□□□ -1.48
PARD3B-204ENST00000406610 KRTAP19-5Q3LI72 72 aa5.78□□□□□ -1.48
PARD3B-204ENST00000406610 KMT2AQ03164 3969 aa5.77□□□□□ -1.49
PARD3B-204ENST00000406610 DNAH7Q8WXX0 4024 aa5.77□□□□□ -1.49
PARD3B-204ENST00000406610 LCE3CQ5T5A8 94 aa5.75□□□□□ -1.49
PARD3B-204ENST00000406610 CMYA5Q8N3K9 4069 aa5.75□□□□□ -1.49
PARD3B-204ENST00000406610 MT1HP80294 61 aa5.75□□□□□ -1.49
PARD3B-204ENST00000406610 SPRR2GQ9BYE4 73 aa5.67□□□□□ -1.5
PARD3B-204ENST00000406610 KRTAP4-1Q9BYQ7 146 aa5.63□□□□□ -1.51
PARD3B-204ENST00000406610 MT2AP02795 61 aa5.61□□□□□ -1.51
PARD3B-204ENST00000406610 LCE3BQ5TA77 95 aa5.59□□□□□ -1.51
PARD3B-204ENST00000406610 SPRR2EP22531 72 aa5.55□□□□□ -1.52
PARD3B-204ENST00000406610 SPRR2BP35325 72 aa5.55□□□□□ -1.52
PARD3B-204ENST00000406610 SPRR2AP35326 72 aa5.55□□□□□ -1.52
PARD3B-204ENST00000406610 DNAH9Q9NYC9 4486 aa5.54□□□□□ -1.52
PARD3B-204ENST00000406610 HECTD4Q9Y4D8 3996 aa5.53□□□□□ -1.52
PARD3B-204ENST00000406610 DNAH6Q9C0G6 4158 aa5.53□□□□□ -1.52
PARD3B-204ENST00000406610 DNAH10Q8IVF4 4471 aa5.5□□□□□ -1.53
PARD3B-204ENST00000406610 DNAH8Q96JB1 4490 aa5.5□□□□□ -1.53
PARD3B-204ENST00000406610 MT1FP04733 61 aa5.49□□□□□ -1.53
PARD3B-204ENST00000406610 FAT2Q9NYQ8 4349 aa5.49□□□□□ -1.53
PARD3B-204ENST00000406610 KRTAP12-4P60329 112 aa5.4□□□□□ -1.54
PARD3B-204ENST00000406610 KRTAP19-4Q3LI73 84 aa5.39□□□□□ -1.55
PARD3B-204ENST00000406610 SPRR2DP22532 72 aa5.36□□□□□ -1.55
PARD3B-204ENST00000406610 DNAH17Q9UFH2 4485 aa5.34□□□□□ -1.55
PARD3B-204ENST00000406610 LCE2BO14633 110 aa5.34□□□□□ -1.55
PARD3B-204ENST00000406610 MT1GP13640 62 aa5.33□□□□□ -1.56
PARD3B-204ENST00000406610 PRKDCP78527 4128 aaKnown RBP5.32□□□□□ -1.56
PARD3B-204ENST00000406610 DNAH11Q96DT5 4516 aa5.29□□□□□ -1.56
PARD3B-204ENST00000406610 DYNC2H1Q8NCM8 4307 aaKnown RBP5.28□□□□□ -1.56
PARD3B-204ENST00000406610 VPS13DQ5THJ4 4388 aa5.23□□□□□ -1.57
PARD3B-204ENST00000406610 FLGP20930 4061 aaPredicted RBP5.21□□□□□ -1.58
PARD3B-204ENST00000406610 LCE3DQ9BYE3 92 aa5.2□□□□□ -1.58
PARD3B-204ENST00000406610 DNAH5Q8TE73 4624 aa5.19□□□□□ -1.58
PARD3B-204ENST00000406610 PLECQ15149 4684 aaKnown RBP5.14□□□□□ -1.59
PARD3B-204ENST00000406610 STARD9Q9P2P6 4700 aa5.12□□□□□ -1.59
PARD3B-204ENST00000406610 MT1XP80297 61 aa5.07□□□□□ -1.6
PARD3B-204ENST00000406610 FAT1Q14517 4588 aa5.07□□□□□ -1.6
PARD3B-204ENST00000406610 LCE3EQ5T5B0 92 aa5.06□□□□□ -1.6
PARD3B-204ENST00000406610 KRTAP19-8Q3LI54 63 aa5.05□□□□□ -1.6
PARD3B-204ENST00000406610 LRP1BQ9NZR2 4599 aa5.03□□□□□ -1.6
PARD3B-204ENST00000406610 LCE2CQ5TA81 110 aa5.03□□□□□ -1.6
PARD3B-204ENST00000406610 KRTAP19-1Q8IUB9 90 aa5.03□□□□□ -1.6
PARD3B-204ENST00000406610 KRTAP4-8A0A0G2JLE6 195 aa5□□□□□ -1.61
PARD3B-204ENST00000406610 KRTAP4-8Q9BYQ9 185 aa5□□□□□ -1.61
PARD3B-204ENST00000406610 LCE2DQ5TA82 110 aaPredicted RBP4.94□□□□□ -1.62
PARD3B-204ENST00000406610 APOBP04114 4563 aaKnown RBP4.93□□□□□ -1.62
PARD3B-204ENST00000406610 PKHD1P08F94 4074 aa4.92□□□□□ -1.62
PARD3B-204ENST00000406610 PKHD1L1Q86WI1 4243 aa4.88□□□□□ -1.63
PARD3B-204ENST00000406610 PKD1P98161 4303 aa4.88□□□□□ -1.63
PARD3B-204ENST00000406610 LRP1Q07954 4544 aaKnown RBP4.85□□□□□ -1.63
PARD3B-204ENST00000406610 MT1BP07438 61 aa4.84□□□□□ -1.63
PARD3B-204ENST00000406610 MT4P47944 62 aa4.84□□□□□ -1.63
PARD3B-204ENST00000406610 SACSQ9NZJ4 4579 aa4.81□□□□□ -1.64
PARD3B-204ENST00000406610 PRM1P04553 51 aa4.81□□□□□ -1.64
PARD3B-204ENST00000406610 KRTAP9-8Q9BYQ0 159 aa4.8□□□□□ -1.64
PARD3B-204ENST00000406610 KRTAP19-3Q7Z4W3 81 aa4.8□□□□□ -1.64
PARD3B-204ENST00000406610 FAT3Q8TDW7 4589 aa4.79□□□□□ -1.64
PARD3B-204ENST00000406610 SPRR5A0A1B0GTR4 108 aa4.76□□□□□ -1.65
PARD3B-204ENST00000406610 LCE1BQ5T7P3 118 aa4.76□□□□□ -1.65
PARD3B-204ENST00000406610 MT1LQ93083 61 aa4.74□□□□□ -1.65
PARD3B-204ENST00000406610 KRTAP4-7Q9BYR0 210 aa4.74□□□□□ -1.65
PARD3B-204ENST00000406610 LCE1DQ5T752 114 aa4.71□□□□□ -1.65
PARD3B-204ENST00000406610 DYNC1H1Q14204 4646 aaKnown RBP4.7□□□□□ -1.66
PARD3B-204ENST00000406610 MT3P25713 68 aa4.68□□□□□ -1.66
PARD3B-204ENST00000406610 KRTAP9-3Q9BYQ3 159 aa4.68□□□□□ -1.66
PARD3B-204ENST00000406610 MYCBP2O75592 4640 aa4.67□□□□□ -1.66
PARD3B-204ENST00000406610 LPAP08519 4548 aa4.61□□□□□ -1.67
PARD3B-204ENST00000406610 MT1EP04732 61 aa4.6□□□□□ -1.67
PARD3B-204ENST00000406610 TNXBP22105 4242 aa4.6□□□□□ -1.67
PARD3B-204ENST00000406610 LOC100996750A0A140TA64 210 aa4.57□□□□□ -1.68
PARD3B-204ENST00000406610 HSPG2P98160 4391 aa4.54□□□□□ -1.68
PARD3B-204ENST00000406610 MT1MQ8N339 61 aa4.51□□□□□ -1.69
PARD3B-204ENST00000406610 KRTAP17-1Q9BYP8 105 aa4.47□□□□□ -1.69
PARD3B-204ENST00000406610 LCE5AQ5TCM9 118 aa4.47□□□□□ -1.69
PARD3B-204ENST00000406610 KRTAP4-3Q9BYR4 195 aa4.43□□□□□ -1.7
PARD3B-204ENST00000406610 RYR1P21817 5038 aa4.4□□□□□ -1.71
PARD3B-204ENST00000406610 KRTAP4-9Q9BYQ8 210 aa4.32□□□□□ -1.72
PARD3B-204ENST00000406610 KRTAP9-2Q9BYQ4 174 aa4.31□□□□□ -1.72
PARD3B-204ENST00000406610 DNHD1Q96M86 4753 aa4.31□□□□□ -1.72
PARD3B-204ENST00000406610 KRTAP19-6Q3LI70 58 aa4.29□□□□□ -1.72
PARD3B-204ENST00000406610 SYNE2Q8WXH0 6885 aaKnown RBP4.29□□□□□ -1.72
PARD3B-204ENST00000406610 LRP2P98164 4655 aa4.27□□□□□ -1.73
PARD3B-204ENST00000406610 KRTAP2-3P0C7H8 128 aa4.23□□□□□ -1.73
PARD3B-204ENST00000406610 KRTAP2-4Q9BYR9 128 aa4.23□□□□□ -1.73
PARD3B-204ENST00000406610 KRTAP2-1Q9BYU5 128 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms