RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 TP53AIP1Q9HCN2 124 aa2.04□□□□□ -2.08
HMGB3P18-201ENST00000406327 TENM2Q9NT68 2774 aa2.04□□□□□ -2.08
HMGB3P18-201ENST00000406327 TRAV22A0A0B4J277 110 aa2.03□□□□□ -2.08
HMGB3P18-201ENST00000406327 LINC01554Q52M75 96 aa2.03□□□□□ -2.08
HMGB3P18-201ENST00000406327 C7orf65Q6ZTY9 151 aa2.03□□□□□ -2.08
HMGB3P18-201ENST00000406327 CYP4F30PQ9H0H9 118 aa2.03□□□□□ -2.08
HMGB3P18-201ENST00000406327 FBN3Q75N90 2809 aa2.02□□□□□ -2.09
HMGB3P18-201ENST00000406327 FP248Q71RG6 208 aaPredicted RBP2.02□□□□□ -2.09
HMGB3P18-201ENST00000406327 COA5Q86WW8 74 aa2.02□□□□□ -2.09
HMGB3P18-201ENST00000406327 MRPL34Q9BQ48 92 aaKnown RBP2.02□□□□□ -2.09
HMGB3P18-201ENST00000406327 SRRM2Q9UQ35 2752 aaKnown RBP2.01□□□□□ -2.09
HMGB3P18-201ENST00000406327 SPINK6Q6UWN8 80 aa2.01□□□□□ -2.09
HMGB3P18-201ENST00000406327 CSMD3Q7Z407 3707 aa2.01□□□□□ -2.09
HMGB3P18-201ENST00000406327 VPS13DQ5THJ4 4388 aa2□□□□□ -2.09
HMGB3P18-201ENST00000406327 KRTAP13-4Q3LI77 160 aa2□□□□□ -2.09
HMGB3P18-201ENST00000406327 DNAH10Q8IVF4 4471 aa1.99□□□□□ -2.09
HMGB3P18-201ENST00000406327 Q1T7F1 81 aa1.99□□□□□ -2.09
HMGB3P18-201ENST00000406327 PCOTHQ58A44 107 aa1.99□□□□□ -2.09
HMGB3P18-201ENST00000406327 LIMD2Q9BT23 127 aa1.99□□□□□ -2.09
HMGB3P18-201ENST00000406327 DNAH7Q8WXX0 4024 aa1.98□□□□□ -2.09
HMGB3P18-201ENST00000406327 LOC101927531A0A1B0GV80 90 aa1.98□□□□□ -2.09
HMGB3P18-201ENST00000406327 SPINK1P00995 79 aa1.98□□□□□ -2.09
HMGB3P18-201ENST00000406327 KRTAP12-3P60328 96 aa1.98□□□□□ -2.09
HMGB3P18-201ENST00000406327 LYSTQ99698 3801 aa1.98□□□□□ -2.09
HMGB3P18-201ENST00000406327 RPS29P62273 56 aaKnown RBP1.97□□□□□ -2.09
HMGB3P18-201ENST00000406327 SPAG11AQ6PDA7 123 aa1.97□□□□□ -2.09
HMGB3P18-201ENST00000406327 STARD9Q9P2P6 4700 aa1.97□□□□□ -2.09
HMGB3P18-201ENST00000406327 PLECQ15149 4684 aaKnown RBP1.97□□□□□ -2.09
HMGB3P18-201ENST00000406327 PRKDCP78527 4128 aaKnown RBP1.97□□□□□ -2.09
HMGB3P18-201ENST00000406327 TGP01266 2768 aa1.97□□□□□ -2.09
HMGB3P18-201ENST00000406327 SMR3BP02814 79 aaPredicted RBP1.96□□□□□ -2.1
HMGB3P18-201ENST00000406327 KRTAP12-1P59990 96 aa1.96□□□□□ -2.1
HMGB3P18-201ENST00000406327 KRTAP10-4P60372 401 aaPredicted RBP1.96□□□□□ -2.1
HMGB3P18-201ENST00000406327 DNHD1Q96M86 4753 aa1.95□□□□□ -2.1
HMGB3P18-201ENST00000406327 RETNLBQ9BQ08 111 aa1.94□□□□□ -2.1
HMGB3P18-201ENST00000406327 DNAH17Q9UFH2 4485 aa1.93□□□□□ -2.1
HMGB3P18-201ENST00000406327 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
HMGB3P18-201ENST00000406327 ACYP2P14621 99 aa1.93□□□□□ -2.1
HMGB3P18-201ENST00000406327 KMT2AQ03164 3969 aa1.93□□□□□ -2.1
HMGB3P18-201ENST00000406327 DNAH2Q9P225 4427 aa1.92□□□□□ -2.1
HMGB3P18-201ENST00000406327 Q5VV11 94 aa1.92□□□□□ -2.1
HMGB3P18-201ENST00000406327 KRTAP5-7Q6L8G8 165 aa1.92□□□□□ -2.1
HMGB3P18-201ENST00000406327 BRK1Q8WUW1 75 aa1.92□□□□□ -2.1
HMGB3P18-201ENST00000406327 DMAC1Q96GE9 116 aa1.92□□□□□ -2.1
HMGB3P18-201ENST00000406327 LINC01558Q9Y6Z2 57 aa1.92□□□□□ -2.1
HMGB3P18-201ENST00000406327 HECTD4Q9Y4D8 3996 aa1.91□□□□□ -2.1
HMGB3P18-201ENST00000406327 ALMS1Q8TCU4 4167 aa1.91□□□□□ -2.1
HMGB3P18-201ENST00000406327 PRR15LQ9BU68 103 aa1.91□□□□□ -2.1
HMGB3P18-201ENST00000406327 DNAH8Q96JB1 4490 aa1.91□□□□□ -2.1
HMGB3P18-201ENST00000406327 DNAH6Q9C0G6 4158 aa1.9□□□□□ -2.1
HMGB3P18-201ENST00000406327 CHKB-CPT1BH3BT56 60 aa1.9□□□□□ -2.11
HMGB3P18-201ENST00000406327 PKD1P98161 4303 aa1.9□□□□□ -2.11
HMGB3P18-201ENST00000406327 LRP1BQ9NZR2 4599 aa1.89□□□□□ -2.11
HMGB3P18-201ENST00000406327 DNAH11Q96DT5 4516 aa1.89□□□□□ -2.11
HMGB3P18-201ENST00000406327 C9orf92A6NGG3 77 aa1.89□□□□□ -2.11
HMGB3P18-201ENST00000406327 Q5VSD8 79 aa1.88□□□□□ -2.11
HMGB3P18-201ENST00000406327 FAT2Q9NYQ8 4349 aa1.87□□□□□ -2.11
HMGB3P18-201ENST00000406327 KRTAP12-4P60329 112 aa1.87□□□□□ -2.11
HMGB3P18-201ENST00000406327 HYDINQ4G0P3 5121 aa1.87□□□□□ -2.11
HMGB3P18-201ENST00000406327 FRAS1Q86XX4 4008 aa1.87□□□□□ -2.11
HMGB3P18-201ENST00000406327 SPINK7P58062 85 aa1.86□□□□□ -2.11
HMGB3P18-201ENST00000406327 A0A1B0GU69 56 aa1.85□□□□□ -2.11
HMGB3P18-201ENST00000406327 ATP11AUNQ6ZP68 121 aa1.85□□□□□ -2.11
HMGB3P18-201ENST00000406327 CDC42SE1Q9NRR8 79 aa1.85□□□□□ -2.11
HMGB3P18-201ENST00000406327 SPTSSBQ8NFR3 76 aa1.84□□□□□ -2.11
HMGB3P18-201ENST00000406327 DNAH5Q8TE73 4624 aa1.84□□□□□ -2.12
HMGB3P18-201ENST00000406327 MT1HL1P0DM35 61 aa1.83□□□□□ -2.12
HMGB3P18-201ENST00000406327 SPATA8Q6RVD6 105 aa1.83□□□□□ -2.12
HMGB3P18-201ENST00000406327 HMCN1Q96RW7 5635 aa1.82□□□□□ -2.12
HMGB3P18-201ENST00000406327 UQCR11O14957 56 aa1.82□□□□□ -2.12
HMGB3P18-201ENST00000406327 RPL37P61927 97 aaKnown RBP1.82□□□□□ -2.12
HMGB3P18-201ENST00000406327 COX6B2Q6YFQ2 88 aa1.82□□□□□ -2.12
HMGB3P18-201ENST00000406327 VPS13BQ7Z7G8 4022 aa1.82□□□□□ -2.12
HMGB3P18-201ENST00000406327 A6NN06 94 aa1.81□□□□□ -2.12
HMGB3P18-201ENST00000406327 MIR22HGQ0VDD5 57 aa1.81□□□□□ -2.12
HMGB3P18-201ENST00000406327 DYNC1H1Q14204 4646 aaKnown RBP1.8□□□□□ -2.12
HMGB3P18-201ENST00000406327 SACSQ9NZJ4 4579 aa1.8□□□□□ -2.12
HMGB3P18-201ENST00000406327 PKHD1P08F94 4074 aa1.8□□□□□ -2.12
HMGB3P18-201ENST00000406327 RYR2Q92736 4967 aa1.79□□□□□ -2.12
HMGB3P18-201ENST00000406327 APOBP04114 4563 aaKnown RBP1.77□□□□□ -2.13
HMGB3P18-201ENST00000406327 FLG2Q5D862 2391 aaPredicted RBP1.77□□□□□ -2.13
HMGB3P18-201ENST00000406327 ROMO1P60602 79 aa1.76□□□□□ -2.13
HMGB3P18-201ENST00000406327 H1FX-AS1Q4G0G2 97 aa1.76□□□□□ -2.13
HMGB3P18-201ENST00000406327 FAT1Q14517 4588 aa1.76□□□□□ -2.13
HMGB3P18-201ENST00000406327 PKHD1L1Q86WI1 4243 aa1.75□□□□□ -2.13
HMGB3P18-201ENST00000406327 H0YAA0 97 aa1.75□□□□□ -2.13
HMGB3P18-201ENST00000406327 S4R3F8 94 aa1.75□□□□□ -2.13
HMGB3P18-201ENST00000406327 KMT2CQ8NEZ4 4911 aaKnown RBP1.75□□□□□ -2.13
HMGB3P18-201ENST00000406327 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
HMGB3P18-201ENST00000406327 HSPG2P98160 4391 aa1.73□□□□□ -2.13
HMGB3P18-201ENST00000406327 CSAG1Q6PB30 78 aa1.71□□□□□ -2.14
HMGB3P18-201ENST00000406327 RYR1P21817 5038 aa1.71□□□□□ -2.14
HMGB3P18-201ENST00000406327 LRP1Q07954 4544 aaKnown RBP1.7□□□□□ -2.14
HMGB3P18-201ENST00000406327 INE1O15225 51 aa1.7□□□□□ -2.14
HMGB3P18-201ENST00000406327 TNXBP22105 4242 aa1.7□□□□□ -2.14
HMGB3P18-201ENST00000406327 DMBT1Q9UGM3 2413 aaPredicted RBP1.7□□□□□ -2.14
HMGB3P18-201ENST00000406327 KIAA1109Q2LD37 5005 aa1.7□□□□□ -2.14
HMGB3P18-201ENST00000406327 RYR3Q15413 4870 aa1.69□□□□□ -2.14
HMGB3P18-201ENST00000406327 FAT3Q8TDW7 4589 aa1.69□□□□□ -2.14
HMGB3P18-201ENST00000406327 KRTAP4-1Q9BYQ7 146 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms