RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 KRTAP17-1Q9BYP8 105 aa8.24□□□□□ -1.09
ATG4B-205ENST00000404914 COX6B2Q6YFQ2 88 aa8.22□□□□□ -1.09
ATG4B-205ENST00000404914 PKHD1L1Q86WI1 4243 aa8.2□□□□□ -1.1
ATG4B-205ENST00000404914 RPS29P62273 56 aaKnown RBP8.16□□□□□ -1.1
ATG4B-205ENST00000404914 BIRC6Q9NR09 4857 aa8.14□□□□□ -1.11
ATG4B-205ENST00000404914 DMBT1Q9UGM3 2413 aaPredicted RBP8.14□□□□□ -1.11
ATG4B-205ENST00000404914 KRTAP10-4P60372 401 aaPredicted RBP8.11□□□□□ -1.11
ATG4B-205ENST00000404914 KRTAP13-4Q3LI77 160 aa8.11□□□□□ -1.11
ATG4B-205ENST00000404914 P0C880 135 aa8.1□□□□□ -1.11
ATG4B-205ENST00000404914 KRTAP10-6P60371 365 aaPredicted RBP8.07□□□□□ -1.12
ATG4B-205ENST00000404914 K7ERS5 55 aa8.05□□□□□ -1.12
ATG4B-205ENST00000404914 A0A0D9SG42 100 aa8.05□□□□□ -1.12
ATG4B-205ENST00000404914 Q5VSD8 79 aa8.05□□□□□ -1.12
ATG4B-205ENST00000404914 KRTAP3-3Q9BYR6 98 aa8.04□□□□□ -1.12
ATG4B-205ENST00000404914 LRP1Q07954 4544 aaKnown RBP8.04□□□□□ -1.12
ATG4B-205ENST00000404914 MYCBP2O75592 4640 aa8.03□□□□□ -1.12
ATG4B-205ENST00000404914 KRTAP4-5Q9BYR2 181 aa8.03□□□□□ -1.12
ATG4B-205ENST00000404914 TPRXLQ17RH7 258 aa8.02□□□□□ -1.13
ATG4B-205ENST00000404914 HERC2O95714 4834 aa8□□□□□ -1.13
ATG4B-205ENST00000404914 KRTAP3-2Q9BYR7 98 aa7.99□□□□□ -1.13
ATG4B-205ENST00000404914 ABCA13Q86UQ4 5058 aa7.99□□□□□ -1.13
ATG4B-205ENST00000404914 C10orf95Q9H7T3 257 aa7.98□□□□□ -1.13
ATG4B-205ENST00000404914 RPL37P61927 97 aaKnown RBP7.98□□□□□ -1.13
ATG4B-205ENST00000404914 FAT3Q8TDW7 4589 aa7.95□□□□□ -1.14
ATG4B-205ENST00000404914 KRTAP10-8P60410 259 aa7.94□□□□□ -1.14
ATG4B-205ENST00000404914 PCLOQ9Y6V0 5065 aa7.87□□□□□ -1.15
ATG4B-205ENST00000404914 SPINT4Q6UDR6 99 aa7.86□□□□□ -1.15
ATG4B-205ENST00000404914 TNXBP22105 4242 aa7.85□□□□□ -1.15
ATG4B-205ENST00000404914 KRTAP12-2P59991 146 aa7.83□□□□□ -1.16
ATG4B-205ENST00000404914 S4R3F8 94 aa7.81□□□□□ -1.16
ATG4B-205ENST00000404914 KRTAP15-1Q3LI76 137 aa7.74□□□□□ -1.17
ATG4B-205ENST00000404914 LPAP08519 4548 aa7.74□□□□□ -1.17
ATG4B-205ENST00000404914 MT1HL1P0DM35 61 aa7.73□□□□□ -1.17
ATG4B-205ENST00000404914 XP32Q5T750 250 aa7.73□□□□□ -1.17
ATG4B-205ENST00000404914 J3QL48 77 aa7.72□□□□□ -1.17
ATG4B-205ENST00000404914 NDUFAF8A1L188 74 aa7.71□□□□□ -1.18
ATG4B-205ENST00000404914 KRTAP12-1P59990 96 aa7.71□□□□□ -1.18
ATG4B-205ENST00000404914 HERC1Q15751 4861 aa7.63□□□□□ -1.19
ATG4B-205ENST00000404914 LRP2P98164 4655 aa7.58□□□□□ -1.2
ATG4B-205ENST00000404914 SEC61BP60468 96 aaKnown RBP7.48□□□□□ -1.21
ATG4B-205ENST00000404914 M0QZ58 72 aa7.43□□□□□ -1.22
ATG4B-205ENST00000404914 HMCN2Q8NDA2 5059 aa7.38□□□□□ -1.23
ATG4B-205ENST00000404914 LUZP6Q538Z0 58 aa7.33□□□□□ -1.24
ATG4B-205ENST00000404914 LORP23490 312 aaPredicted RBP7.33□□□□□ -1.24
ATG4B-205ENST00000404914 R4GN34 69 aa7.27□□□□□ -1.25
ATG4B-205ENST00000404914 PLAC4Q8WY50 150 aa7.21□□□□□ -1.26
ATG4B-205ENST00000404914 UBR4Q5T4S7 5183 aa7.18□□□□□ -1.26
ATG4B-205ENST00000404914 MUC2Q02817 5179 aa7.17□□□□□ -1.26
ATG4B-205ENST00000404914 MUC17Q685J3 4493 aa7.16□□□□□ -1.26
ATG4B-205ENST00000404914 RNF213Q63HN8 5207 aa7.09□□□□□ -1.27
ATG4B-205ENST00000404914 KRTAP4-1Q9BYQ7 146 aa7.07□□□□□ -1.28
ATG4B-205ENST00000404914 CAMK2N1Q7Z7J9 78 aa6.94□□□□□ -1.3
ATG4B-205ENST00000404914 KRTAP19-2Q3LHN2 52 aa6.93□□□□□ -1.3
ATG4B-205ENST00000404914 PP632Q6XCG6 107 aa6.87□□□□□ -1.31
ATG4B-205ENST00000404914 FAT4Q6V0I7 4981 aa6.87□□□□□ -1.31
ATG4B-205ENST00000404914 FLGP20930 4061 aaPredicted RBP6.73□□□□□ -1.33
ATG4B-205ENST00000404914 TNP1P09430 55 aa6.68□□□□□ -1.34
ATG4B-205ENST00000404914 LCE2CQ5TA81 110 aa6.67□□□□□ -1.34
ATG4B-205ENST00000404914 SPRR5A0A1B0GTR4 108 aa6.65□□□□□ -1.34
ATG4B-205ENST00000404914 MT1HP80294 61 aa6.53□□□□□ -1.36
ATG4B-205ENST00000404914 KRTAP23-1A1A580 65 aa6.53□□□□□ -1.36
ATG4B-205ENST00000404914 LCE2AQ5TA79 106 aaPredicted RBP6.43□□□□□ -1.38
ATG4B-205ENST00000404914 LCE3AQ5TA76 89 aa6.43□□□□□ -1.38
ATG4B-205ENST00000404914 KRTAP19-1Q8IUB9 90 aa6.42□□□□□ -1.38
ATG4B-205ENST00000404914 M0R2T5 61 aa6.41□□□□□ -1.38
ATG4B-205ENST00000404914 SPRR2GQ9BYE4 73 aa6.37□□□□□ -1.39
ATG4B-205ENST00000404914 KRTAP9-8Q9BYQ0 159 aa6.27□□□□□ -1.41
ATG4B-205ENST00000404914 MT2AP02795 61 aa6.22□□□□□ -1.41
ATG4B-205ENST00000404914 MT1FP04733 61 aa6.2□□□□□ -1.42
ATG4B-205ENST00000404914 PRO2289Q9P1D8 64 aa6.16□□□□□ -1.42
ATG4B-205ENST00000404914 KRTAP8-1Q8IUC2 63 aa6.16□□□□□ -1.42
ATG4B-205ENST00000404914 KRTAP10-10P60014 251 aa6.13□□□□□ -1.43
ATG4B-205ENST00000404914 KRTAP10-5P60370 271 aa6.08□□□□□ -1.44
ATG4B-205ENST00000404914 MT1XP80297 61 aa6.07□□□□□ -1.44
ATG4B-205ENST00000404914 MT1BP07438 61 aa6.04□□□□□ -1.44
ATG4B-205ENST00000404914 KRTAP12-3P60328 96 aa6.04□□□□□ -1.44
ATG4B-205ENST00000404914 KRTAP9-3Q9BYQ3 159 aa6.04□□□□□ -1.44
ATG4B-205ENST00000404914 KRTAP19-8Q3LI54 63 aa6.02□□□□□ -1.45
ATG4B-205ENST00000404914 FSIP2Q5CZC0 6907 aa6.01□□□□□ -1.45
ATG4B-205ENST00000404914 USH2AO75445 5202 aa6□□□□□ -1.45
ATG4B-205ENST00000404914 KRTAP10-12P60413 245 aa6□□□□□ -1.45
ATG4B-205ENST00000404914 KRTAP10-7P60409 375 aaPredicted RBP5.99□□□□□ -1.45
ATG4B-205ENST00000404914 INE1O15225 51 aa5.97□□□□□ -1.45
ATG4B-205ENST00000404914 LCE2BO14633 110 aa5.96□□□□□ -1.46
ATG4B-205ENST00000404914 LCE2DQ5TA82 110 aaPredicted RBP5.84□□□□□ -1.48
ATG4B-205ENST00000404914 KRTAP9-2Q9BYQ4 174 aa5.83□□□□□ -1.48
ATG4B-205ENST00000404914 KMT2DO14686 5537 aa5.81□□□□□ -1.48
ATG4B-205ENST00000404914 SSPOA2VEC9 5147 aa5.8□□□□□ -1.48
ATG4B-205ENST00000404914 KRTAP19-5Q3LI72 72 aa5.75□□□□□ -1.49
ATG4B-205ENST00000404914 LCE3CQ5T5A8 94 aa5.7□□□□□ -1.5
ATG4B-205ENST00000404914 KRTAP9-6A8MVA2 160 aa5.68□□□□□ -1.5
ATG4B-205ENST00000404914 KRTAP4-8A0A0G2JLE6 195 aa5.61□□□□□ -1.51
ATG4B-205ENST00000404914 KRTAP4-8Q9BYQ9 185 aa5.61□□□□□ -1.51
ATG4B-205ENST00000404914 FCGBPQ9Y6R7 5405 aaPredicted RBP5.56□□□□□ -1.52
ATG4B-205ENST00000404914 CRCT1Q9UGL9 99 aa5.55□□□□□ -1.52
ATG4B-205ENST00000404914 KRTAP19-6Q3LI70 58 aa5.55□□□□□ -1.52
ATG4B-205ENST00000404914 KRTAP4-7Q9BYR0 210 aa5.55□□□□□ -1.52
ATG4B-205ENST00000404914 KRTAP2-3P0C7H8 128 aa5.44□□□□□ -1.54
ATG4B-205ENST00000404914 KRTAP2-4Q9BYR9 128 aa5.44□□□□□ -1.54
ATG4B-205ENST00000404914 KRTAP2-1Q9BYU5 128 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms