RNA–Protein interactions for RNA: ENST00000404525.5

LTBP1-202, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,092 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-202ENST00000404525 PLECQ15149 4684 aaKnown RBP4.01□□□□□ -1.77
LTBP1-202ENST00000404525 PRO2289Q9P1D8 64 aa4□□□□□ -1.77
LTBP1-202ENST00000404525 VPS13DQ5THJ4 4388 aa4□□□□□ -1.77
LTBP1-202ENST00000404525 CMYA5Q8N3K9 4069 aa3.99□□□□□ -1.77
LTBP1-202ENST00000404525 KRTAP10-10P60014 251 aa3.99□□□□□ -1.77
LTBP1-202ENST00000404525 KRTAP4-5Q9BYR2 181 aa3.99□□□□□ -1.77
LTBP1-202ENST00000404525 PRKDCP78527 4128 aaKnown RBP3.99□□□□□ -1.77
LTBP1-202ENST00000404525 KRTAP12-1P59990 96 aa3.98□□□□□ -1.77
LTBP1-202ENST00000404525 KRTAP3-2Q9BYR7 98 aa3.98□□□□□ -1.77
LTBP1-202ENST00000404525 DNAH17Q9UFH2 4485 aa3.96□□□□□ -1.78
LTBP1-202ENST00000404525 KRTAP3-3Q9BYR6 98 aa3.96□□□□□ -1.78
LTBP1-202ENST00000404525 STARD9Q9P2P6 4700 aa3.95□□□□□ -1.78
LTBP1-202ENST00000404525 HECTD4Q9Y4D8 3996 aa3.94□□□□□ -1.78
LTBP1-202ENST00000404525 DNAH7Q8WXX0 4024 aa3.94□□□□□ -1.78
LTBP1-202ENST00000404525 DNAH11Q96DT5 4516 aa3.91□□□□□ -1.78
LTBP1-202ENST00000404525 DYNC2H1Q8NCM8 4307 aaKnown RBP3.9□□□□□ -1.78
LTBP1-202ENST00000404525 DNAH5Q8TE73 4624 aa3.9□□□□□ -1.79
LTBP1-202ENST00000404525 DNAH2Q9P225 4427 aa3.9□□□□□ -1.79
LTBP1-202ENST00000404525 INE1O15225 51 aa3.87□□□□□ -1.79
LTBP1-202ENST00000404525 KMT2AQ03164 3969 aa3.85□□□□□ -1.79
LTBP1-202ENST00000404525 DNAH6Q9C0G6 4158 aa3.84□□□□□ -1.79
LTBP1-202ENST00000404525 DYNC1H1Q14204 4646 aaKnown RBP3.83□□□□□ -1.8
LTBP1-202ENST00000404525 LRP1BQ9NZR2 4599 aa3.82□□□□□ -1.8
LTBP1-202ENST00000404525 VPS13BQ7Z7G8 4022 aa3.78□□□□□ -1.8
LTBP1-202ENST00000404525 FAT2Q9NYQ8 4349 aa3.78□□□□□ -1.8
LTBP1-202ENST00000404525 SACSQ9NZJ4 4579 aa3.72□□□□□ -1.81
LTBP1-202ENST00000404525 RYR2Q92736 4967 aa3.72□□□□□ -1.81
LTBP1-202ENST00000404525 FAT1Q14517 4588 aa3.69□□□□□ -1.82
LTBP1-202ENST00000404525 RYR3Q15413 4870 aa3.65□□□□□ -1.83
LTBP1-202ENST00000404525 RYR1P21817 5038 aa3.64□□□□□ -1.83
LTBP1-202ENST00000404525 KRTAP17-1Q9BYP8 105 aa3.63□□□□□ -1.83
LTBP1-202ENST00000404525 KIAA1109Q2LD37 5005 aa3.63□□□□□ -1.83
LTBP1-202ENST00000404525 HYDINQ4G0P3 5121 aa3.62□□□□□ -1.83
LTBP1-202ENST00000404525 APOBP04114 4563 aaKnown RBP3.61□□□□□ -1.83
LTBP1-202ENST00000404525 BIRC6Q9NR09 4857 aa3.6□□□□□ -1.83
LTBP1-202ENST00000404525 PKD1P98161 4303 aa3.59□□□□□ -1.83
LTBP1-202ENST00000404525 LORP23490 312 aaPredicted RBP3.56□□□□□ -1.84
LTBP1-202ENST00000404525 KRTAP23-1A1A580 65 aa3.54□□□□□ -1.84
LTBP1-202ENST00000404525 KRTAP4-1Q9BYQ7 146 aa3.53□□□□□ -1.84
LTBP1-202ENST00000404525 PKHD1L1Q86WI1 4243 aa3.53□□□□□ -1.84
LTBP1-202ENST00000404525 KRTAP10-12P60413 245 aa3.52□□□□□ -1.85
LTBP1-202ENST00000404525 HSPG2P98160 4391 aa3.52□□□□□ -1.85
LTBP1-202ENST00000404525 KMT2CQ8NEZ4 4911 aaKnown RBP3.52□□□□□ -1.85
LTBP1-202ENST00000404525 FAT3Q8TDW7 4589 aa3.5□□□□□ -1.85
LTBP1-202ENST00000404525 PKHD1P08F94 4074 aa3.49□□□□□ -1.85
LTBP1-202ENST00000404525 LRP1Q07954 4544 aaKnown RBP3.48□□□□□ -1.85
LTBP1-202ENST00000404525 MYCBP2O75592 4640 aa3.47□□□□□ -1.85
LTBP1-202ENST00000404525 HERC2O95714 4834 aa3.47□□□□□ -1.85
LTBP1-202ENST00000404525 KRTAP12-3P60328 96 aa3.46□□□□□ -1.86
LTBP1-202ENST00000404525 MT1HP80294 61 aa3.46□□□□□ -1.86
LTBP1-202ENST00000404525 EPPK1P58107 5090 aaKnown RBP3.39□□□□□ -1.87
LTBP1-202ENST00000404525 LCE3AQ5TA76 89 aa3.38□□□□□ -1.87
LTBP1-202ENST00000404525 SPRR5A0A1B0GTR4 108 aa3.38□□□□□ -1.87
LTBP1-202ENST00000404525 CRCT1Q9UGL9 99 aa3.36□□□□□ -1.87
LTBP1-202ENST00000404525 TNXBP22105 4242 aa3.35□□□□□ -1.87
LTBP1-202ENST00000404525 MT2AP02795 61 aa3.34□□□□□ -1.87
LTBP1-202ENST00000404525 LRP2P98164 4655 aa3.31□□□□□ -1.88
LTBP1-202ENST00000404525 HERC1Q15751 4861 aa3.3□□□□□ -1.88
LTBP1-202ENST00000404525 ABCA13Q86UQ4 5058 aa3.29□□□□□ -1.88
LTBP1-202ENST00000404525 MT1FP04733 61 aa3.28□□□□□ -1.88
LTBP1-202ENST00000404525 SPRR2GQ9BYE4 73 aa3.27□□□□□ -1.89
LTBP1-202ENST00000404525 LPAP08519 4548 aa3.24□□□□□ -1.89
LTBP1-202ENST00000404525 PCLOQ9Y6V0 5065 aa3.23□□□□□ -1.89
LTBP1-202ENST00000404525 KRTAP10-5P60370 271 aa3.23□□□□□ -1.89
LTBP1-202ENST00000404525 LCE2CQ5TA81 110 aa3.22□□□□□ -1.89
LTBP1-202ENST00000404525 KRTAP8-1Q8IUC2 63 aa3.18□□□□□ -1.9
LTBP1-202ENST00000404525 KRTAP9-8Q9BYQ0 159 aa3.15□□□□□ -1.9
LTBP1-202ENST00000404525 KRTAP19-2Q3LHN2 52 aa3.15□□□□□ -1.91
LTBP1-202ENST00000404525 KRTAP19-8Q3LI54 63 aa3.13□□□□□ -1.91
LTBP1-202ENST00000404525 MUC17Q685J3 4493 aa3.12□□□□□ -1.91
LTBP1-202ENST00000404525 KRTAP19-1Q8IUB9 90 aa3.12□□□□□ -1.91
LTBP1-202ENST00000404525 KRTAP19-4Q3LI73 84 aa3.09□□□□□ -1.91
LTBP1-202ENST00000404525 KRTAP9-3Q9BYQ3 159 aa3.07□□□□□ -1.92
LTBP1-202ENST00000404525 HMCN2Q8NDA2 5059 aa3.05□□□□□ -1.92
LTBP1-202ENST00000404525 FLGP20930 4061 aaPredicted RBP3.03□□□□□ -1.92
LTBP1-202ENST00000404525 MT1BP07438 61 aa3.03□□□□□ -1.92
LTBP1-202ENST00000404525 KRTAP19-5Q3LI72 72 aa3.02□□□□□ -1.93
LTBP1-202ENST00000404525 LCE2AQ5TA79 106 aaPredicted RBP3.02□□□□□ -1.93
LTBP1-202ENST00000404525 RNF213Q63HN8 5207 aa3.02□□□□□ -1.93
LTBP1-202ENST00000404525 LCE3CQ5T5A8 94 aa3.01□□□□□ -1.93
LTBP1-202ENST00000404525 MT1XP80297 61 aa2.97□□□□□ -1.93
LTBP1-202ENST00000404525 FAT4Q6V0I7 4981 aa2.96□□□□□ -1.93
LTBP1-202ENST00000404525 KRTAP10-7P60409 375 aaPredicted RBP2.96□□□□□ -1.94
LTBP1-202ENST00000404525 SPRR2FQ96RM1 72 aa2.95□□□□□ -1.94
LTBP1-202ENST00000404525 LCE2BO14633 110 aa2.95□□□□□ -1.94
LTBP1-202ENST00000404525 LCE2DQ5TA82 110 aaPredicted RBP2.94□□□□□ -1.94
LTBP1-202ENST00000404525 KRTAP9-2Q9BYQ4 174 aa2.92□□□□□ -1.94
LTBP1-202ENST00000404525 UBR4Q5T4S7 5183 aa2.9□□□□□ -1.94
LTBP1-202ENST00000404525 KRTAP19-6Q3LI70 58 aa2.86□□□□□ -1.95
LTBP1-202ENST00000404525 MUC2Q02817 5179 aa2.85□□□□□ -1.95
LTBP1-202ENST00000404525 SPRR2EP22531 72 aa2.82□□□□□ -1.96
LTBP1-202ENST00000404525 SPRR2BP35325 72 aa2.82□□□□□ -1.96
LTBP1-202ENST00000404525 SPRR2AP35326 72 aa2.82□□□□□ -1.96
LTBP1-202ENST00000404525 KRTAP12-4P60329 112 aa2.79□□□□□ -1.96
LTBP1-202ENST00000404525 KRTAP4-8A0A0G2JLE6 195 aa2.79□□□□□ -1.96
LTBP1-202ENST00000404525 KRTAP4-8Q9BYQ9 185 aa2.79□□□□□ -1.96
LTBP1-202ENST00000404525 KRTAP9-6A0A140TA67 174 aa2.77□□□□□ -1.97
LTBP1-202ENST00000404525 LCE3BQ5TA77 95 aa2.75□□□□□ -1.97
LTBP1-202ENST00000404525 MT1GP13640 62 aa2.74□□□□□ -1.97
LTBP1-202ENST00000404525 SPRR2DP22532 72 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms