RNA–Protein interactions for RNA: ENST00000404284.6

TOM1-203, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-203ENST00000404284 COX6B2Q6YFQ2 88 aa8.24□□□□□ -1.09
TOM1-203ENST00000404284 SPINT4Q6UDR6 99 aa8.23□□□□□ -1.09
TOM1-203ENST00000404284 TNXBP22105 4242 aa8.23□□□□□ -1.09
TOM1-203ENST00000404284 LRP1Q07954 4544 aaKnown RBP8.22□□□□□ -1.09
TOM1-203ENST00000404284 H1FX-AS1Q4G0G2 97 aa8.21□□□□□ -1.09
TOM1-203ENST00000404284 K7ERS5 55 aa8.18□□□□□ -1.1
TOM1-203ENST00000404284 KRTAP10-8P60410 259 aa8.18□□□□□ -1.1
TOM1-203ENST00000404284 NDUFAF8A1L188 74 aa8.18□□□□□ -1.1
TOM1-203ENST00000404284 HSPG2P98160 4391 aa8.14□□□□□ -1.11
TOM1-203ENST00000404284 Q5VSD8 79 aa8.12□□□□□ -1.11
TOM1-203ENST00000404284 RPL37P61927 97 aaKnown RBP8.11□□□□□ -1.11
TOM1-203ENST00000404284 TPRXLQ17RH7 258 aa8.07□□□□□ -1.12
TOM1-203ENST00000404284 XP32Q5T750 250 aa8.07□□□□□ -1.12
TOM1-203ENST00000404284 KRTAP3-3Q9BYR6 98 aa8.06□□□□□ -1.12
TOM1-203ENST00000404284 RYR1P21817 5038 aa8.03□□□□□ -1.12
TOM1-203ENST00000404284 A0A0A0MQY5 61 aa8.03□□□□□ -1.12
TOM1-203ENST00000404284 KRTAP17-1Q9BYP8 105 aa8.02□□□□□ -1.12
TOM1-203ENST00000404284 DMBT1Q9UGM3 2413 aaPredicted RBP8.02□□□□□ -1.12
TOM1-203ENST00000404284 KRTAP15-1Q3LI76 137 aa8.02□□□□□ -1.13
TOM1-203ENST00000404284 C10orf95Q9H7T3 257 aa8.01□□□□□ -1.13
TOM1-203ENST00000404284 MYCBP2O75592 4640 aa8.01□□□□□ -1.13
TOM1-203ENST00000404284 EPPK1P58107 5090 aaKnown RBP8□□□□□ -1.13
TOM1-203ENST00000404284 KRTAP10-6P60371 365 aaPredicted RBP7.99□□□□□ -1.13
TOM1-203ENST00000404284 MT1HL1P0DM35 61 aa7.94□□□□□ -1.14
TOM1-203ENST00000404284 KRTAP3-2Q9BYR7 98 aa7.94□□□□□ -1.14
TOM1-203ENST00000404284 S4R3F8 94 aa7.94□□□□□ -1.14
TOM1-203ENST00000404284 A0A0D9SG42 100 aa7.92□□□□□ -1.14
TOM1-203ENST00000404284 KIAA1109Q2LD37 5005 aa7.92□□□□□ -1.14
TOM1-203ENST00000404284 KRTAP13-4Q3LI77 160 aa7.92□□□□□ -1.14
TOM1-203ENST00000404284 LPAP08519 4548 aa7.8□□□□□ -1.16
TOM1-203ENST00000404284 LRP2P98164 4655 aa7.76□□□□□ -1.17
TOM1-203ENST00000404284 LUZP6Q538Z0 58 aa7.65□□□□□ -1.19
TOM1-203ENST00000404284 KRTAP12-2P59991 146 aa7.64□□□□□ -1.19
TOM1-203ENST00000404284 KRTAP4-5Q9BYR2 181 aa7.62□□□□□ -1.19
TOM1-203ENST00000404284 ABCA13Q86UQ4 5058 aa7.61□□□□□ -1.19
TOM1-203ENST00000404284 KRTAP12-1P59990 96 aa7.6□□□□□ -1.19
TOM1-203ENST00000404284 BIRC6Q9NR09 4857 aa7.58□□□□□ -1.2
TOM1-203ENST00000404284 M0QZ58 72 aa7.55□□□□□ -1.2
TOM1-203ENST00000404284 HERC2O95714 4834 aa7.5□□□□□ -1.21
TOM1-203ENST00000404284 MUC17Q685J3 4493 aa7.46□□□□□ -1.22
TOM1-203ENST00000404284 SEC61BP60468 96 aaKnown RBP7.43□□□□□ -1.22
TOM1-203ENST00000404284 KRTAP4-1Q9BYQ7 146 aa7.4□□□□□ -1.23
TOM1-203ENST00000404284 PLAC4Q8WY50 150 aa7.37□□□□□ -1.23
TOM1-203ENST00000404284 R4GN34 69 aa7.35□□□□□ -1.23
TOM1-203ENST00000404284 LORP23490 312 aaPredicted RBP7.32□□□□□ -1.24
TOM1-203ENST00000404284 PCLOQ9Y6V0 5065 aa7.3□□□□□ -1.24
TOM1-203ENST00000404284 KRTAP19-2Q3LHN2 52 aa7.3□□□□□ -1.24
TOM1-203ENST00000404284 J3QL48 77 aa7.27□□□□□ -1.25
TOM1-203ENST00000404284 HERC1Q15751 4861 aa7.17□□□□□ -1.26
TOM1-203ENST00000404284 MUC2Q02817 5179 aa7.06□□□□□ -1.28
TOM1-203ENST00000404284 FLGP20930 4061 aaPredicted RBP7.05□□□□□ -1.28
TOM1-203ENST00000404284 HMCN2Q8NDA2 5059 aa7.01□□□□□ -1.29
TOM1-203ENST00000404284 CAMK2N1Q7Z7J9 78 aa6.97□□□□□ -1.29
TOM1-203ENST00000404284 PP632Q6XCG6 107 aa6.87□□□□□ -1.31
TOM1-203ENST00000404284 LCE2CQ5TA81 110 aa6.83□□□□□ -1.32
TOM1-203ENST00000404284 UBR4Q5T4S7 5183 aa6.78□□□□□ -1.32
TOM1-203ENST00000404284 FAT4Q6V0I7 4981 aa6.76□□□□□ -1.33
TOM1-203ENST00000404284 TNP1P09430 55 aa6.72□□□□□ -1.33
TOM1-203ENST00000404284 RNF213Q63HN8 5207 aa6.71□□□□□ -1.34
TOM1-203ENST00000404284 SPRR2GQ9BYE4 73 aa6.71□□□□□ -1.34
TOM1-203ENST00000404284 KRTAP19-1Q8IUB9 90 aa6.68□□□□□ -1.34
TOM1-203ENST00000404284 KRTAP23-1A1A580 65 aa6.66□□□□□ -1.34
TOM1-203ENST00000404284 SPRR5A0A1B0GTR4 108 aa6.65□□□□□ -1.34
TOM1-203ENST00000404284 PRO2289Q9P1D8 64 aa6.64□□□□□ -1.35
TOM1-203ENST00000404284 MT1HP80294 61 aa6.63□□□□□ -1.35
TOM1-203ENST00000404284 M0R2T5 61 aa6.59□□□□□ -1.35
TOM1-203ENST00000404284 MT1FP04733 61 aa6.54□□□□□ -1.36
TOM1-203ENST00000404284 MT2AP02795 61 aa6.54□□□□□ -1.36
TOM1-203ENST00000404284 KRTAP9-8Q9BYQ0 159 aa6.49□□□□□ -1.37
TOM1-203ENST00000404284 KRTAP10-10P60014 251 aa6.48□□□□□ -1.37
TOM1-203ENST00000404284 KRTAP19-8Q3LI54 63 aa6.41□□□□□ -1.38
TOM1-203ENST00000404284 LCE3AQ5TA76 89 aa6.41□□□□□ -1.38
TOM1-203ENST00000404284 INE1O15225 51 aa6.38□□□□□ -1.39
TOM1-203ENST00000404284 MT1BP07438 61 aa6.34□□□□□ -1.39
TOM1-203ENST00000404284 KRTAP10-5P60370 271 aa6.29□□□□□ -1.4
TOM1-203ENST00000404284 MT1XP80297 61 aa6.29□□□□□ -1.4
TOM1-203ENST00000404284 KRTAP8-1Q8IUC2 63 aa6.25□□□□□ -1.41
TOM1-203ENST00000404284 KRTAP9-3Q9BYQ3 159 aa6.22□□□□□ -1.41
TOM1-203ENST00000404284 KRTAP10-12P60413 245 aa6.14□□□□□ -1.43
TOM1-203ENST00000404284 KRTAP10-7P60409 375 aaPredicted RBP6.11□□□□□ -1.43
TOM1-203ENST00000404284 KRTAP12-3P60328 96 aa6.09□□□□□ -1.44
TOM1-203ENST00000404284 LCE2AQ5TA79 106 aaPredicted RBP6.05□□□□□ -1.44
TOM1-203ENST00000404284 LCE2BO14633 110 aa5.97□□□□□ -1.45
TOM1-203ENST00000404284 KRTAP19-5Q3LI72 72 aa5.84□□□□□ -1.47
TOM1-203ENST00000404284 USH2AO75445 5202 aa5.82□□□□□ -1.48
TOM1-203ENST00000404284 KMT2DO14686 5537 aa5.74□□□□□ -1.49
TOM1-203ENST00000404284 LCE3CQ5T5A8 94 aa5.73□□□□□ -1.49
TOM1-203ENST00000404284 KRTAP4-8A0A0G2JLE6 195 aa5.72□□□□□ -1.49
TOM1-203ENST00000404284 KRTAP4-8Q9BYQ9 185 aa5.72□□□□□ -1.49
TOM1-203ENST00000404284 KRTAP19-7Q3SYF9 63 aa5.61□□□□□ -1.51
TOM1-203ENST00000404284 FSIP2Q5CZC0 6907 aa5.58□□□□□ -1.52
TOM1-203ENST00000404284 KRTAP9-6A8MVA2 160 aa5.56□□□□□ -1.52
TOM1-203ENST00000404284 SSPOA2VEC9 5147 aa5.52□□□□□ -1.53
TOM1-203ENST00000404284 KRTAP4-7Q9BYR0 210 aa5.48□□□□□ -1.53
TOM1-203ENST00000404284 MT1EP04732 61 aa5.44□□□□□ -1.54
TOM1-203ENST00000404284 MT1LQ93083 61 aa5.44□□□□□ -1.54
TOM1-203ENST00000404284 LCE2DQ5TA82 110 aaPredicted RBP5.42□□□□□ -1.54
TOM1-203ENST00000404284 KRTAP19-4Q3LI73 84 aa5.41□□□□□ -1.54
TOM1-203ENST00000404284 KRTAP2-3P0C7H8 128 aa5.36□□□□□ -1.55
TOM1-203ENST00000404284 KRTAP2-4Q9BYR9 128 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms