RNA–Protein interactions for RNA: ENST00000404025.2

NLRC4-204, Transcript of NLR family CARD domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NLRC4, Length 3,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-204ENST00000404025 A0A1B0GU33 70 aa3.97□□□□□ -1.77
NLRC4-204ENST00000404025 MYCBP2O75592 4640 aa3.97□□□□□ -1.77
NLRC4-204ENST00000404025 FAT3Q8TDW7 4589 aa3.97□□□□□ -1.77
NLRC4-204ENST00000404025 SEC61BP60468 96 aaKnown RBP3.97□□□□□ -1.77
NLRC4-204ENST00000404025 LUZP6Q538Z0 58 aa3.96□□□□□ -1.78
NLRC4-204ENST00000404025 NDUFAF8A1L188 74 aa3.96□□□□□ -1.78
NLRC4-204ENST00000404025 RPL37P61927 97 aaKnown RBP3.95□□□□□ -1.78
NLRC4-204ENST00000404025 HSPG2P98160 4391 aa3.95□□□□□ -1.78
NLRC4-204ENST00000404025 XP32Q5T750 250 aa3.94□□□□□ -1.78
NLRC4-204ENST00000404025 H0YAA0 97 aa3.94□□□□□ -1.78
NLRC4-204ENST00000404025 H1FX-AS1Q4G0G2 97 aa3.94□□□□□ -1.78
NLRC4-204ENST00000404025 TNXBP22105 4242 aa3.93□□□□□ -1.78
NLRC4-204ENST00000404025 LCE2DQ5TA82 110 aaPredicted RBP3.93□□□□□ -1.78
NLRC4-204ENST00000404025 KRTAP17-1Q9BYP8 105 aa3.91□□□□□ -1.78
NLRC4-204ENST00000404025 KIAA1109Q2LD37 5005 aa3.91□□□□□ -1.78
NLRC4-204ENST00000404025 RYR3Q15413 4870 aa3.91□□□□□ -1.78
NLRC4-204ENST00000404025 RYR1P21817 5038 aa3.9□□□□□ -1.78
NLRC4-204ENST00000404025 S4R3F8 94 aa3.88□□□□□ -1.79
NLRC4-204ENST00000404025 K7ERS5 55 aa3.88□□□□□ -1.79
NLRC4-204ENST00000404025 KRTAP25-1Q3LHN0 102 aa3.88□□□□□ -1.79
NLRC4-204ENST00000404025 MT1HL1P0DM35 61 aa3.87□□□□□ -1.79
NLRC4-204ENST00000404025 KRTAP3-3Q9BYR6 98 aa3.87□□□□□ -1.79
NLRC4-204ENST00000404025 KRTAP3-2Q9BYR7 98 aa3.87□□□□□ -1.79
NLRC4-204ENST00000404025 SPINT4Q6UDR6 99 aa3.86□□□□□ -1.79
NLRC4-204ENST00000404025 A0A0D9SG42 100 aa3.86□□□□□ -1.79
NLRC4-204ENST00000404025 CRIPTQ9P021 101 aa3.82□□□□□ -1.8
NLRC4-204ENST00000404025 KRTAP10-6P60371 365 aaPredicted RBP3.81□□□□□ -1.8
NLRC4-204ENST00000404025 KRTAP13-4Q3LI77 160 aa3.79□□□□□ -1.8
NLRC4-204ENST00000404025 LRP2P98164 4655 aa3.79□□□□□ -1.8
NLRC4-204ENST00000404025 TPRXLQ17RH7 258 aa3.78□□□□□ -1.8
NLRC4-204ENST00000404025 EPPK1P58107 5090 aaKnown RBP3.78□□□□□ -1.8
NLRC4-204ENST00000404025 KRTAP4-5Q9BYR2 181 aa3.77□□□□□ -1.81
NLRC4-204ENST00000404025 LPAP08519 4548 aa3.76□□□□□ -1.81
NLRC4-204ENST00000404025 ABCA13Q86UQ4 5058 aa3.7□□□□□ -1.82
NLRC4-204ENST00000404025 KRTAP12-2P59991 146 aa3.67□□□□□ -1.82
NLRC4-204ENST00000404025 M0QZ58 72 aa3.65□□□□□ -1.83
NLRC4-204ENST00000404025 KRTAP12-1P59990 96 aa3.63□□□□□ -1.83
NLRC4-204ENST00000404025 KRTAP15-1Q3LI76 137 aa3.63□□□□□ -1.83
NLRC4-204ENST00000404025 C10orf95Q9H7T3 257 aa3.63□□□□□ -1.83
NLRC4-204ENST00000404025 R4GN34 69 aa3.63□□□□□ -1.83
NLRC4-204ENST00000404025 HERC2O95714 4834 aa3.61□□□□□ -1.83
NLRC4-204ENST00000404025 KRTAP4-1Q9BYQ7 146 aa3.61□□□□□ -1.83
NLRC4-204ENST00000404025 MUC17Q685J3 4493 aa3.56□□□□□ -1.84
NLRC4-204ENST00000404025 LORP23490 312 aaPredicted RBP3.55□□□□□ -1.84
NLRC4-204ENST00000404025 CAMK2N1Q7Z7J9 78 aa3.52□□□□□ -1.85
NLRC4-204ENST00000404025 MUC2Q02817 5179 aa3.5□□□□□ -1.85
NLRC4-204ENST00000404025 BIRC6Q9NR09 4857 aa3.48□□□□□ -1.85
NLRC4-204ENST00000404025 KRTAP19-2Q3LHN2 52 aa3.47□□□□□ -1.85
NLRC4-204ENST00000404025 HERC1Q15751 4861 aa3.43□□□□□ -1.86
NLRC4-204ENST00000404025 FLGP20930 4061 aaPredicted RBP3.39□□□□□ -1.87
NLRC4-204ENST00000404025 M0R2T5 61 aa3.39□□□□□ -1.87
NLRC4-204ENST00000404025 HMCN2Q8NDA2 5059 aa3.36□□□□□ -1.87
NLRC4-204ENST00000404025 PCLOQ9Y6V0 5065 aa3.36□□□□□ -1.87
NLRC4-204ENST00000404025 LCE2BO14633 110 aa3.36□□□□□ -1.87
NLRC4-204ENST00000404025 LCE2AQ5TA79 106 aaPredicted RBP3.35□□□□□ -1.87
NLRC4-204ENST00000404025 FAT4Q6V0I7 4981 aa3.35□□□□□ -1.87
NLRC4-204ENST00000404025 LCE2CQ5TA81 110 aa3.33□□□□□ -1.88
NLRC4-204ENST00000404025 PLAC4Q8WY50 150 aa3.31□□□□□ -1.88
NLRC4-204ENST00000404025 TNP1P09430 55 aa3.29□□□□□ -1.88
NLRC4-204ENST00000404025 PP632Q6XCG6 107 aa3.29□□□□□ -1.88
NLRC4-204ENST00000404025 RNF213Q63HN8 5207 aa3.28□□□□□ -1.88
NLRC4-204ENST00000404025 KRTAP10-10P60014 251 aa3.26□□□□□ -1.89
NLRC4-204ENST00000404025 PRO2289Q9P1D8 64 aa3.26□□□□□ -1.89
NLRC4-204ENST00000404025 UBR4Q5T4S7 5183 aa3.25□□□□□ -1.89
NLRC4-204ENST00000404025 MT1HP80294 61 aa3.25□□□□□ -1.89
NLRC4-204ENST00000404025 KRTAP23-1A1A580 65 aa3.23□□□□□ -1.89
NLRC4-204ENST00000404025 KRTAP19-1Q8IUB9 90 aa3.22□□□□□ -1.89
NLRC4-204ENST00000404025 SPRR2GQ9BYE4 73 aa3.22□□□□□ -1.89
NLRC4-204ENST00000404025 MT2AP02795 61 aa3.2□□□□□ -1.9
NLRC4-204ENST00000404025 MT1FP04733 61 aa3.2□□□□□ -1.9
NLRC4-204ENST00000404025 KRTAP9-8Q9BYQ0 159 aa3.15□□□□□ -1.91
NLRC4-204ENST00000404025 LCE3AQ5TA76 89 aa3.11□□□□□ -1.91
NLRC4-204ENST00000404025 KRTAP19-8Q3LI54 63 aa3.07□□□□□ -1.92
NLRC4-204ENST00000404025 MT1BP07438 61 aa3.06□□□□□ -1.92
NLRC4-204ENST00000404025 KRTAP10-5P60370 271 aa3.03□□□□□ -1.92
NLRC4-204ENST00000404025 MT1XP80297 61 aa3.03□□□□□ -1.92
NLRC4-204ENST00000404025 KRTAP9-3Q9BYQ3 159 aa3.02□□□□□ -1.93
NLRC4-204ENST00000404025 INE1O15225 51 aa3.01□□□□□ -1.93
NLRC4-204ENST00000404025 KRTAP10-12P60413 245 aa3□□□□□ -1.93
NLRC4-204ENST00000404025 SPRR5A0A1B0GTR4 108 aa2.98□□□□□ -1.93
NLRC4-204ENST00000404025 KRTAP8-1Q8IUC2 63 aa2.98□□□□□ -1.93
NLRC4-204ENST00000404025 KRTAP10-7P60409 375 aaPredicted RBP2.97□□□□□ -1.93
NLRC4-204ENST00000404025 KRTAP12-3P60328 96 aa2.96□□□□□ -1.94
NLRC4-204ENST00000404025 USH2AO75445 5202 aa2.92□□□□□ -1.94
NLRC4-204ENST00000404025 KRTAP19-5Q3LI72 72 aa2.85□□□□□ -1.95
NLRC4-204ENST00000404025 KMT2DO14686 5537 aa2.85□□□□□ -1.95
NLRC4-204ENST00000404025 KRTAP4-8A0A0G2JLE6 195 aa2.82□□□□□ -1.96
NLRC4-204ENST00000404025 KRTAP4-8Q9BYQ9 185 aa2.82□□□□□ -1.96
NLRC4-204ENST00000404025 LCE3CQ5T5A8 94 aa2.76□□□□□ -1.97
NLRC4-204ENST00000404025 FSIP2Q5CZC0 6907 aa2.73□□□□□ -1.97
NLRC4-204ENST00000404025 KRTAP19-7Q3SYF9 63 aa2.69□□□□□ -1.98
NLRC4-204ENST00000404025 KRTAP4-7Q9BYR0 210 aa2.69□□□□□ -1.98
NLRC4-204ENST00000404025 SSPOA2VEC9 5147 aa2.67□□□□□ -1.98
NLRC4-204ENST00000404025 KRTAP9-6A8MVA2 160 aa2.64□□□□□ -1.99
NLRC4-204ENST00000404025 MT1EP04732 61 aa2.63□□□□□ -1.99
NLRC4-204ENST00000404025 MT1LQ93083 61 aa2.62□□□□□ -1.99
NLRC4-204ENST00000404025 KRTAP19-6Q3LI70 58 aa2.61□□□□□ -1.99
NLRC4-204ENST00000404025 KRTAP19-4Q3LI73 84 aa2.55□□□□□ -2
NLRC4-204ENST00000404025 FCGBPQ9Y6R7 5405 aaPredicted RBP2.54□□□□□ -2
NLRC4-204ENST00000404025 MUC12Q9UKN1 5478 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms