RNA–Protein interactions for RNA: ENST00000402934.5

LTBP1-201, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LTBP1, Length 4,948 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-201ENST00000402934 PRKDCP78527 4128 aaKnown RBP4.05□□□□□ -1.76
LTBP1-201ENST00000402934 DNAH17Q9UFH2 4485 aa4.04□□□□□ -1.76
LTBP1-201ENST00000402934 KRTAP3-1Q9BYR8 98 aa4.04□□□□□ -1.76
LTBP1-201ENST00000402934 DNAH10Q8IVF4 4471 aa4.03□□□□□ -1.76
LTBP1-201ENST00000402934 DYNC2H1Q8NCM8 4307 aaKnown RBP4.02□□□□□ -1.77
LTBP1-201ENST00000402934 MT1HL1P0DM35 61 aa4.01□□□□□ -1.77
LTBP1-201ENST00000402934 DNAH5Q8TE73 4624 aa4□□□□□ -1.77
LTBP1-201ENST00000402934 CSMD3Q7Z407 3707 aa3.99□□□□□ -1.77
LTBP1-201ENST00000402934 KRTAP10-6P60371 365 aaPredicted RBP3.99□□□□□ -1.77
LTBP1-201ENST00000402934 DNAH11Q96DT5 4516 aa3.97□□□□□ -1.77
LTBP1-201ENST00000402934 DNAH2Q9P225 4427 aa3.95□□□□□ -1.78
LTBP1-201ENST00000402934 DNAH6Q9C0G6 4158 aa3.93□□□□□ -1.78
LTBP1-201ENST00000402934 KRTAP4-5Q9BYR2 181 aa3.91□□□□□ -1.78
LTBP1-201ENST00000402934 DYNC1H1Q14204 4646 aaKnown RBP3.91□□□□□ -1.78
LTBP1-201ENST00000402934 KMT2AQ03164 3969 aa3.91□□□□□ -1.78
LTBP1-201ENST00000402934 DNAH7Q8WXX0 4024 aa3.91□□□□□ -1.78
LTBP1-201ENST00000402934 LRP1BQ9NZR2 4599 aa3.89□□□□□ -1.79
LTBP1-201ENST00000402934 DNAH8Q96JB1 4490 aa3.86□□□□□ -1.79
LTBP1-201ENST00000402934 KRTAP23-1A1A580 65 aa3.84□□□□□ -1.79
LTBP1-201ENST00000402934 KRTAP10-12P60413 245 aa3.84□□□□□ -1.79
LTBP1-201ENST00000402934 FAT2Q9NYQ8 4349 aa3.84□□□□□ -1.79
LTBP1-201ENST00000402934 LYSTQ99698 3801 aa3.82□□□□□ -1.8
LTBP1-201ENST00000402934 HECTD4Q9Y4D8 3996 aa3.81□□□□□ -1.8
LTBP1-201ENST00000402934 KRTAP3-2Q9BYR7 98 aa3.81□□□□□ -1.8
LTBP1-201ENST00000402934 SACSQ9NZJ4 4579 aa3.8□□□□□ -1.8
LTBP1-201ENST00000402934 FAT1Q14517 4588 aa3.8□□□□□ -1.8
LTBP1-201ENST00000402934 KRTAP12-3P60328 96 aa3.77□□□□□ -1.81
LTBP1-201ENST00000402934 KRTAP3-3Q9BYR6 98 aa3.76□□□□□ -1.81
LTBP1-201ENST00000402934 RYR2Q92736 4967 aa3.76□□□□□ -1.81
LTBP1-201ENST00000402934 VPS13BQ7Z7G8 4022 aa3.75□□□□□ -1.81
LTBP1-201ENST00000402934 HYDINQ4G0P3 5121 aa3.73□□□□□ -1.81
LTBP1-201ENST00000402934 CRCT1Q9UGL9 99 aa3.72□□□□□ -1.81
LTBP1-201ENST00000402934 APOBP04114 4563 aaKnown RBP3.71□□□□□ -1.82
LTBP1-201ENST00000402934 RYR1P21817 5038 aa3.69□□□□□ -1.82
LTBP1-201ENST00000402934 KRTAP17-1Q9BYP8 105 aa3.69□□□□□ -1.82
LTBP1-201ENST00000402934 FRAS1Q86XX4 4008 aa3.68□□□□□ -1.82
LTBP1-201ENST00000402934 RYR3Q15413 4870 aa3.66□□□□□ -1.82
LTBP1-201ENST00000402934 KIAA1109Q2LD37 5005 aa3.66□□□□□ -1.82
LTBP1-201ENST00000402934 PKD1P98161 4303 aa3.65□□□□□ -1.83
LTBP1-201ENST00000402934 LCE3AQ5TA76 89 aa3.63□□□□□ -1.83
LTBP1-201ENST00000402934 PKHD1P08F94 4074 aa3.6□□□□□ -1.83
LTBP1-201ENST00000402934 KRTAP4-1Q9BYQ7 146 aa3.59□□□□□ -1.84
LTBP1-201ENST00000402934 HSPG2P98160 4391 aa3.58□□□□□ -1.84
LTBP1-201ENST00000402934 LRP1Q07954 4544 aaKnown RBP3.56□□□□□ -1.84
LTBP1-201ENST00000402934 KRTAP10-5P60370 271 aa3.56□□□□□ -1.84
LTBP1-201ENST00000402934 KMT2CQ8NEZ4 4911 aaKnown RBP3.56□□□□□ -1.84
LTBP1-201ENST00000402934 FAT3Q8TDW7 4589 aa3.54□□□□□ -1.84
LTBP1-201ENST00000402934 BIRC6Q9NR09 4857 aa3.51□□□□□ -1.85
LTBP1-201ENST00000402934 KRTAP8-1Q8IUC2 63 aa3.5□□□□□ -1.85
LTBP1-201ENST00000402934 MYCBP2O75592 4640 aa3.48□□□□□ -1.85
LTBP1-201ENST00000402934 LORP23490 312 aaPredicted RBP3.48□□□□□ -1.85
LTBP1-201ENST00000402934 PKHD1L1Q86WI1 4243 aa3.47□□□□□ -1.85
LTBP1-201ENST00000402934 HERC2O95714 4834 aa3.46□□□□□ -1.85
LTBP1-201ENST00000402934 TNXBP22105 4242 aa3.43□□□□□ -1.86
LTBP1-201ENST00000402934 MT1HP80294 61 aa3.42□□□□□ -1.86
LTBP1-201ENST00000402934 EPPK1P58107 5090 aaKnown RBP3.4□□□□□ -1.86
LTBP1-201ENST00000402934 KRTAP19-4Q3LI73 84 aa3.39□□□□□ -1.87
LTBP1-201ENST00000402934 MT2AP02795 61 aa3.34□□□□□ -1.88
LTBP1-201ENST00000402934 LRP2P98164 4655 aa3.33□□□□□ -1.88
LTBP1-201ENST00000402934 ABCA13Q86UQ4 5058 aa3.32□□□□□ -1.88
LTBP1-201ENST00000402934 SPRR2GQ9BYE4 73 aa3.32□□□□□ -1.88
LTBP1-201ENST00000402934 HERC1Q15751 4861 aa3.3□□□□□ -1.88
LTBP1-201ENST00000402934 MT1FP04733 61 aa3.29□□□□□ -1.88
LTBP1-201ENST00000402934 KRTAP10-7P60409 375 aaPredicted RBP3.29□□□□□ -1.88
LTBP1-201ENST00000402934 LPAP08519 4548 aa3.28□□□□□ -1.89
LTBP1-201ENST00000402934 LCE2CQ5TA81 110 aa3.25□□□□□ -1.89
LTBP1-201ENST00000402934 LCE3CQ5T5A8 94 aa3.25□□□□□ -1.89
LTBP1-201ENST00000402934 KRTAP19-2Q3LHN2 52 aa3.23□□□□□ -1.89
LTBP1-201ENST00000402934 KRTAP19-5Q3LI72 72 aa3.22□□□□□ -1.89
LTBP1-201ENST00000402934 PCLOQ9Y6V0 5065 aa3.21□□□□□ -1.9
LTBP1-201ENST00000402934 KRTAP19-1Q8IUB9 90 aa3.19□□□□□ -1.9
LTBP1-201ENST00000402934 SPRR2FQ96RM1 72 aa3.19□□□□□ -1.9
LTBP1-201ENST00000402934 MUC17Q685J3 4493 aa3.19□□□□□ -1.9
LTBP1-201ENST00000402934 KRTAP9-8Q9BYQ0 159 aa3.17□□□□□ -1.9
LTBP1-201ENST00000402934 KRTAP19-8Q3LI54 63 aa3.16□□□□□ -1.9
LTBP1-201ENST00000402934 FLGP20930 4061 aaPredicted RBP3.13□□□□□ -1.91
LTBP1-201ENST00000402934 HMCN2Q8NDA2 5059 aa3.09□□□□□ -1.91
LTBP1-201ENST00000402934 KRTAP9-3Q9BYQ3 159 aa3.08□□□□□ -1.92
LTBP1-201ENST00000402934 MT1BP07438 61 aa3.08□□□□□ -1.92
LTBP1-201ENST00000402934 SPRR5A0A1B0GTR4 108 aa3.07□□□□□ -1.92
LTBP1-201ENST00000402934 RNF213Q63HN8 5207 aa3.06□□□□□ -1.92
LTBP1-201ENST00000402934 KRTAP12-4P60329 112 aa3.03□□□□□ -1.92
LTBP1-201ENST00000402934 MT1XP80297 61 aa3.03□□□□□ -1.92
LTBP1-201ENST00000402934 FAT4Q6V0I7 4981 aa3□□□□□ -1.93
LTBP1-201ENST00000402934 LCE3BQ5TA77 95 aa2.99□□□□□ -1.93
LTBP1-201ENST00000402934 SPRR2EP22531 72 aa2.96□□□□□ -1.93
LTBP1-201ENST00000402934 SPRR2BP35325 72 aa2.96□□□□□ -1.93
LTBP1-201ENST00000402934 SPRR2AP35326 72 aa2.96□□□□□ -1.93
LTBP1-201ENST00000402934 LCE2BO14633 110 aa2.95□□□□□ -1.94
LTBP1-201ENST00000402934 LCE2AQ5TA79 106 aaPredicted RBP2.95□□□□□ -1.94
LTBP1-201ENST00000402934 MT1GP13640 62 aa2.94□□□□□ -1.94
LTBP1-201ENST00000402934 UBR4Q5T4S7 5183 aa2.94□□□□□ -1.94
LTBP1-201ENST00000402934 LCE3DQ9BYE3 92 aa2.94□□□□□ -1.94
LTBP1-201ENST00000402934 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
LTBP1-201ENST00000402934 MUC2Q02817 5179 aa2.9□□□□□ -1.95
LTBP1-201ENST00000402934 SPRR2DP22532 72 aa2.88□□□□□ -1.95
LTBP1-201ENST00000402934 KRTAP4-8A0A0G2JLE6 195 aa2.83□□□□□ -1.96
LTBP1-201ENST00000402934 KRTAP4-8Q9BYQ9 185 aa2.83□□□□□ -1.96
LTBP1-201ENST00000402934 KRTAP19-6Q3LI70 58 aa2.8□□□□□ -1.96
LTBP1-201ENST00000402934 MT1LQ93083 61 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms