RNA–Protein interactions for RNA: ENST00000402802.7

PDGFA-203, Transcript of platelet derived growth factor subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFA, Length 2,305 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-203ENST00000402802 FAT3Q8TDW7 4589 aa8.84□□□□□ -0.99
PDGFA-203ENST00000402802 H0YAA0 97 aa8.83□□□□□ -1
PDGFA-203ENST00000402802 SPINK1P00995 79 aa8.82□□□□□ -1
PDGFA-203ENST00000402802 Q8N1X5 172 aa8.8□□□□□ -1
PDGFA-203ENST00000402802 P0C880 135 aa8.78□□□□□ -1
PDGFA-203ENST00000402802 J3QL48 77 aa8.77□□□□□ -1.01
PDGFA-203ENST00000402802 LCE2BO14633 110 aa8.77□□□□□ -1.01
PDGFA-203ENST00000402802 KRTAP4-5Q9BYR2 181 aa8.76□□□□□ -1.01
PDGFA-203ENST00000402802 A0A1B0GU33 70 aa8.71□□□□□ -1.01
PDGFA-203ENST00000402802 KRTAP10-8P60410 259 aa8.71□□□□□ -1.01
PDGFA-203ENST00000402802 DMBT1Q9UGM3 2413 aaPredicted RBP8.71□□□□□ -1.02
PDGFA-203ENST00000402802 RPS29P62273 56 aaKnown RBP8.68□□□□□ -1.02
PDGFA-203ENST00000402802 H1FX-AS1Q4G0G2 97 aa8.66□□□□□ -1.02
PDGFA-203ENST00000402802 BIRC6Q9NR09 4857 aa8.66□□□□□ -1.02
PDGFA-203ENST00000402802 ABCA13Q86UQ4 5058 aa8.65□□□□□ -1.03
PDGFA-203ENST00000402802 MT1HL1P0DM35 61 aa8.64□□□□□ -1.03
PDGFA-203ENST00000402802 C9orf92A6NGG3 77 aa8.6□□□□□ -1.03
PDGFA-203ENST00000402802 K7ERS5 55 aa8.6□□□□□ -1.03
PDGFA-203ENST00000402802 A0A0A0MQY5 61 aa8.59□□□□□ -1.03
PDGFA-203ENST00000402802 HERC2O95714 4834 aa8.58□□□□□ -1.04
PDGFA-203ENST00000402802 CRIPTQ9P021 101 aa8.55□□□□□ -1.04
PDGFA-203ENST00000402802 KRTAP3-1Q9BYR8 98 aa8.49□□□□□ -1.05
PDGFA-203ENST00000402802 COX6B2Q6YFQ2 88 aa8.46□□□□□ -1.06
PDGFA-203ENST00000402802 NDUFAF8A1L188 74 aa8.42□□□□□ -1.06
PDGFA-203ENST00000402802 C20orf166-AS1Q96NR2 134 aa8.41□□□□□ -1.06
PDGFA-203ENST00000402802 SPINT4Q6UDR6 99 aa8.4□□□□□ -1.07
PDGFA-203ENST00000402802 LPAP08519 4548 aa8.38□□□□□ -1.07
PDGFA-203ENST00000402802 RPL37P61927 97 aaKnown RBP8.35□□□□□ -1.07
PDGFA-203ENST00000402802 TPRXLQ17RH7 258 aa8.34□□□□□ -1.07
PDGFA-203ENST00000402802 KRTAP15-1Q3LI76 137 aa8.32□□□□□ -1.08
PDGFA-203ENST00000402802 PCLOQ9Y6V0 5065 aa8.31□□□□□ -1.08
PDGFA-203ENST00000402802 XP32Q5T750 250 aa8.3□□□□□ -1.08
PDGFA-203ENST00000402802 LRP2P98164 4655 aa8.29□□□□□ -1.08
PDGFA-203ENST00000402802 LCE2CQ5TA81 110 aa8.29□□□□□ -1.08
PDGFA-203ENST00000402802 KRTAP10-6P60371 365 aaPredicted RBP8.21□□□□□ -1.09
PDGFA-203ENST00000402802 HERC1Q15751 4861 aa8.21□□□□□ -1.09
PDGFA-203ENST00000402802 KRTAP13-4Q3LI77 160 aa8.19□□□□□ -1.1
PDGFA-203ENST00000402802 C10orf95Q9H7T3 257 aa8.18□□□□□ -1.1
PDGFA-203ENST00000402802 A0A0D9SG42 100 aa8.17□□□□□ -1.1
PDGFA-203ENST00000402802 LCE2AQ5TA79 106 aaPredicted RBP8.07□□□□□ -1.12
PDGFA-203ENST00000402802 S4R3F8 94 aa8.06□□□□□ -1.12
PDGFA-203ENST00000402802 HMCN2Q8NDA2 5059 aa8.02□□□□□ -1.13
PDGFA-203ENST00000402802 LUZP6Q538Z0 58 aa8.02□□□□□ -1.13
PDGFA-203ENST00000402802 KRTAP12-2P59991 146 aa7.98□□□□□ -1.13
PDGFA-203ENST00000402802 MUC17Q685J3 4493 aa7.91□□□□□ -1.14
PDGFA-203ENST00000402802 KRTAP12-1P59990 96 aa7.91□□□□□ -1.14
PDGFA-203ENST00000402802 KRTAP4-1Q9BYQ7 146 aa7.91□□□□□ -1.14
PDGFA-203ENST00000402802 LORP23490 312 aaPredicted RBP7.9□□□□□ -1.14
PDGFA-203ENST00000402802 MUC2Q02817 5179 aa7.9□□□□□ -1.15
PDGFA-203ENST00000402802 SEC61BP60468 96 aaKnown RBP7.89□□□□□ -1.15
PDGFA-203ENST00000402802 M0QZ58 72 aa7.75□□□□□ -1.17
PDGFA-203ENST00000402802 UBR4Q5T4S7 5183 aa7.74□□□□□ -1.17
PDGFA-203ENST00000402802 RNF213Q63HN8 5207 aa7.65□□□□□ -1.18
PDGFA-203ENST00000402802 PLAC4Q8WY50 150 aa7.64□□□□□ -1.19
PDGFA-203ENST00000402802 KRTAP19-2Q3LHN2 52 aa7.63□□□□□ -1.19
PDGFA-203ENST00000402802 FAT4Q6V0I7 4981 aa7.56□□□□□ -1.2
PDGFA-203ENST00000402802 FLGP20930 4061 aaPredicted RBP7.51□□□□□ -1.21
PDGFA-203ENST00000402802 R4GN34 69 aa7.39□□□□□ -1.23
PDGFA-203ENST00000402802 PP632Q6XCG6 107 aa7.36□□□□□ -1.23
PDGFA-203ENST00000402802 MT1HP80294 61 aa7.28□□□□□ -1.24
PDGFA-203ENST00000402802 M0R2T5 61 aa7.24□□□□□ -1.25
PDGFA-203ENST00000402802 CAMK2N1Q7Z7J9 78 aa7.13□□□□□ -1.27
PDGFA-203ENST00000402802 SPRR5A0A1B0GTR4 108 aa7.07□□□□□ -1.28
PDGFA-203ENST00000402802 MT2AP02795 61 aa7.01□□□□□ -1.29
PDGFA-203ENST00000402802 KRTAP9-8Q9BYQ0 159 aa7.01□□□□□ -1.29
PDGFA-203ENST00000402802 KRTAP23-1A1A580 65 aa7□□□□□ -1.29
PDGFA-203ENST00000402802 PRO2289Q9P1D8 64 aa7□□□□□ -1.29
PDGFA-203ENST00000402802 MT1FP04733 61 aa7□□□□□ -1.29
PDGFA-203ENST00000402802 KRTAP10-10P60014 251 aa6.96□□□□□ -1.3
PDGFA-203ENST00000402802 TNP1P09430 55 aa6.91□□□□□ -1.3
PDGFA-203ENST00000402802 KRTAP19-1Q8IUB9 90 aa6.87□□□□□ -1.31
PDGFA-203ENST00000402802 SPRR2GQ9BYE4 73 aa6.81□□□□□ -1.32
PDGFA-203ENST00000402802 KRTAP9-3Q9BYQ3 159 aa6.74□□□□□ -1.33
PDGFA-203ENST00000402802 INE1O15225 51 aa6.72□□□□□ -1.33
PDGFA-203ENST00000402802 LOC100996750A0A140TA64 210 aa6.68□□□□□ -1.34
PDGFA-203ENST00000402802 KRTAP4-6Q9BYQ5 205 aa6.68□□□□□ -1.34
PDGFA-203ENST00000402802 KRTAP19-8Q3LI54 63 aa6.62□□□□□ -1.35
PDGFA-203ENST00000402802 MT1BP07438 61 aa6.61□□□□□ -1.35
PDGFA-203ENST00000402802 USH2AO75445 5202 aa6.59□□□□□ -1.35
PDGFA-203ENST00000402802 LCE3AQ5TA76 89 aa6.45□□□□□ -1.38
PDGFA-203ENST00000402802 FSIP2Q5CZC0 6907 aa6.41□□□□□ -1.38
PDGFA-203ENST00000402802 MT1XP80297 61 aa6.41□□□□□ -1.38
PDGFA-203ENST00000402802 KRTAP10-5P60370 271 aa6.41□□□□□ -1.38
PDGFA-203ENST00000402802 KRTAP8-1Q8IUC2 63 aa6.33□□□□□ -1.4
PDGFA-203ENST00000402802 SSPOA2VEC9 5147 aa6.31□□□□□ -1.4
PDGFA-203ENST00000402802 KRTAP4-8Q9BYQ9 185 aa6.27□□□□□ -1.41
PDGFA-203ENST00000402802 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.26□□□□□ -1.41
PDGFA-203ENST00000402802 KRTAP9-2Q9BYQ4 174 aa6.24□□□□□ -1.41
PDGFA-203ENST00000402802 KRTAP10-7P60409 375 aaPredicted RBP6.22□□□□□ -1.41
PDGFA-203ENST00000402802 KRTAP9-6A0A140TA67 174 aa6.2□□□□□ -1.42
PDGFA-203ENST00000402802 KRTAP4-12Q9BQ66 201 aa6.16□□□□□ -1.42
PDGFA-203ENST00000402802 KMT2DO14686 5537 aa6.15□□□□□ -1.43
PDGFA-203ENST00000402802 KRTAP12-3P60328 96 aa6.14□□□□□ -1.43
PDGFA-203ENST00000402802 KRTAP10-12P60413 245 aa6.14□□□□□ -1.43
PDGFA-203ENST00000402802 KRTAP19-6Q3LI70 58 aa6.07□□□□□ -1.44
PDGFA-203ENST00000402802 LCE4AQ5TA78 99 aa6.05□□□□□ -1.44
PDGFA-203ENST00000402802 KRTAP4-8A0A0G2JLE6 195 aa6□□□□□ -1.45
PDGFA-203ENST00000402802 LCE3BQ5TA77 95 aa6□□□□□ -1.45
PDGFA-203ENST00000402802 FCGBPQ9Y6R7 5405 aaPredicted RBP5.99□□□□□ -1.45
PDGFA-203ENST00000402802 KRTAP9-9Q9BYP9 154 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms