RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 RYR3Q15413 4870 aa7.51□□□□□ -1.21
ATG3-202ENST00000402314 C20orf166-AS1Q96NR2 134 aa7.49□□□□□ -1.21
ATG3-202ENST00000402314 FAT3Q8TDW7 4589 aa7.48□□□□□ -1.21
ATG3-202ENST00000402314 HSPG2P98160 4391 aa7.48□□□□□ -1.21
ATG3-202ENST00000402314 COX6B2Q6YFQ2 88 aa7.46□□□□□ -1.22
ATG3-202ENST00000402314 P0C880 135 aa7.46□□□□□ -1.22
ATG3-202ENST00000402314 TNXBP22105 4242 aa7.45□□□□□ -1.22
ATG3-202ENST00000402314 KIAA1109Q2LD37 5005 aa7.45□□□□□ -1.22
ATG3-202ENST00000402314 K7ERS5 55 aa7.44□□□□□ -1.22
ATG3-202ENST00000402314 KRTAP17-1Q9BYP8 105 aa7.42□□□□□ -1.22
ATG3-202ENST00000402314 C10orf95Q9H7T3 257 aa7.41□□□□□ -1.22
ATG3-202ENST00000402314 RYR1P21817 5038 aa7.39□□□□□ -1.23
ATG3-202ENST00000402314 SPINT4Q6UDR6 99 aa7.39□□□□□ -1.23
ATG3-202ENST00000402314 Q5VSD8 79 aa7.38□□□□□ -1.23
ATG3-202ENST00000402314 KRTAP13-4Q3LI77 160 aa7.33□□□□□ -1.24
ATG3-202ENST00000402314 KRTAP10-8P60410 259 aa7.32□□□□□ -1.24
ATG3-202ENST00000402314 TPRXLQ17RH7 258 aa7.32□□□□□ -1.24
ATG3-202ENST00000402314 RPL37P61927 97 aaKnown RBP7.27□□□□□ -1.25
ATG3-202ENST00000402314 EPPK1P58107 5090 aaKnown RBP7.27□□□□□ -1.25
ATG3-202ENST00000402314 LPAP08519 4548 aa7.25□□□□□ -1.25
ATG3-202ENST00000402314 NDUFAF8A1L188 74 aa7.24□□□□□ -1.25
ATG3-202ENST00000402314 XP32Q5T750 250 aa7.23□□□□□ -1.25
ATG3-202ENST00000402314 KRTAP10-6P60371 365 aaPredicted RBP7.22□□□□□ -1.25
ATG3-202ENST00000402314 LRP2P98164 4655 aa7.22□□□□□ -1.25
ATG3-202ENST00000402314 MT1HL1P0DM35 61 aa7.17□□□□□ -1.26
ATG3-202ENST00000402314 KRTAP3-3Q9BYR6 98 aa7.17□□□□□ -1.26
ATG3-202ENST00000402314 ABCA13Q86UQ4 5058 aa7.16□□□□□ -1.26
ATG3-202ENST00000402314 KRTAP3-2Q9BYR7 98 aa7.13□□□□□ -1.27
ATG3-202ENST00000402314 KRTAP12-2P59991 146 aa7.12□□□□□ -1.27
ATG3-202ENST00000402314 S4R3F8 94 aa7.09□□□□□ -1.28
ATG3-202ENST00000402314 KRTAP4-5Q9BYR2 181 aa7.05□□□□□ -1.28
ATG3-202ENST00000402314 KRTAP15-1Q3LI76 137 aa7.02□□□□□ -1.29
ATG3-202ENST00000402314 KRTAP12-1P59990 96 aa6.95□□□□□ -1.3
ATG3-202ENST00000402314 A0A0A0MQY5 61 aa6.93□□□□□ -1.3
ATG3-202ENST00000402314 HERC2O95714 4834 aa6.85□□□□□ -1.31
ATG3-202ENST00000402314 MUC2Q02817 5179 aa6.8□□□□□ -1.32
ATG3-202ENST00000402314 M0QZ58 72 aa6.76□□□□□ -1.33
ATG3-202ENST00000402314 KRTAP4-1Q9BYQ7 146 aa6.74□□□□□ -1.33
ATG3-202ENST00000402314 MUC17Q685J3 4493 aa6.74□□□□□ -1.33
ATG3-202ENST00000402314 J3QL48 77 aa6.7□□□□□ -1.34
ATG3-202ENST00000402314 R4GN34 69 aa6.68□□□□□ -1.34
ATG3-202ENST00000402314 LORP23490 312 aaPredicted RBP6.64□□□□□ -1.35
ATG3-202ENST00000402314 PLAC4Q8WY50 150 aa6.64□□□□□ -1.35
ATG3-202ENST00000402314 HERC1Q15751 4861 aa6.63□□□□□ -1.35
ATG3-202ENST00000402314 SEC61BP60468 96 aaKnown RBP6.63□□□□□ -1.35
ATG3-202ENST00000402314 BIRC6Q9NR09 4857 aa6.55□□□□□ -1.36
ATG3-202ENST00000402314 PCLOQ9Y6V0 5065 aa6.54□□□□□ -1.36
ATG3-202ENST00000402314 LUZP6Q538Z0 58 aa6.53□□□□□ -1.36
ATG3-202ENST00000402314 KRTAP19-2Q3LHN2 52 aa6.51□□□□□ -1.37
ATG3-202ENST00000402314 FAT4Q6V0I7 4981 aa6.47□□□□□ -1.37
ATG3-202ENST00000402314 CAMK2N1Q7Z7J9 78 aa6.44□□□□□ -1.38
ATG3-202ENST00000402314 HMCN2Q8NDA2 5059 aa6.42□□□□□ -1.38
ATG3-202ENST00000402314 FLGP20930 4061 aaPredicted RBP6.41□□□□□ -1.38
ATG3-202ENST00000402314 RNF213Q63HN8 5207 aa6.39□□□□□ -1.39
ATG3-202ENST00000402314 UBR4Q5T4S7 5183 aa6.3□□□□□ -1.4
ATG3-202ENST00000402314 LCE2CQ5TA81 110 aa6.17□□□□□ -1.42
ATG3-202ENST00000402314 PP632Q6XCG6 107 aa6.16□□□□□ -1.42
ATG3-202ENST00000402314 M0R2T5 61 aa6.09□□□□□ -1.43
ATG3-202ENST00000402314 TNP1P09430 55 aa6.08□□□□□ -1.44
ATG3-202ENST00000402314 MT1HP80294 61 aa6□□□□□ -1.45
ATG3-202ENST00000402314 KRTAP19-1Q8IUB9 90 aa5.99□□□□□ -1.45
ATG3-202ENST00000402314 MT1FP04733 61 aa5.93□□□□□ -1.46
ATG3-202ENST00000402314 KRTAP10-10P60014 251 aa5.93□□□□□ -1.46
ATG3-202ENST00000402314 SPRR2GQ9BYE4 73 aa5.92□□□□□ -1.46
ATG3-202ENST00000402314 MT2AP02795 61 aa5.9□□□□□ -1.46
ATG3-202ENST00000402314 SPRR5A0A1B0GTR4 108 aa5.86□□□□□ -1.47
ATG3-202ENST00000402314 KRTAP9-8Q9BYQ0 159 aa5.85□□□□□ -1.47
ATG3-202ENST00000402314 LCE3AQ5TA76 89 aa5.82□□□□□ -1.48
ATG3-202ENST00000402314 MT1BP07438 61 aa5.69□□□□□ -1.5
ATG3-202ENST00000402314 USH2AO75445 5202 aa5.68□□□□□ -1.5
ATG3-202ENST00000402314 KRTAP23-1A1A580 65 aa5.68□□□□□ -1.5
ATG3-202ENST00000402314 KRTAP19-8Q3LI54 63 aa5.65□□□□□ -1.51
ATG3-202ENST00000402314 KRTAP10-5P60370 271 aa5.63□□□□□ -1.51
ATG3-202ENST00000402314 MT1XP80297 61 aa5.63□□□□□ -1.51
ATG3-202ENST00000402314 PRO2289Q9P1D8 64 aa5.61□□□□□ -1.51
ATG3-202ENST00000402314 KRTAP9-3Q9BYQ3 159 aa5.59□□□□□ -1.51
ATG3-202ENST00000402314 KMT2DO14686 5537 aa5.53□□□□□ -1.52
ATG3-202ENST00000402314 KRTAP10-7P60409 375 aaPredicted RBP5.53□□□□□ -1.52
ATG3-202ENST00000402314 KRTAP10-12P60413 245 aa5.47□□□□□ -1.53
ATG3-202ENST00000402314 KRTAP12-3P60328 96 aa5.46□□□□□ -1.53
ATG3-202ENST00000402314 KRTAP8-1Q8IUC2 63 aa5.46□□□□□ -1.53
ATG3-202ENST00000402314 LCE2BO14633 110 aa5.45□□□□□ -1.54
ATG3-202ENST00000402314 INE1O15225 51 aa5.41□□□□□ -1.54
ATG3-202ENST00000402314 FSIP2Q5CZC0 6907 aa5.31□□□□□ -1.56
ATG3-202ENST00000402314 LCE2AQ5TA79 106 aaPredicted RBP5.31□□□□□ -1.56
ATG3-202ENST00000402314 KRTAP4-8A0A0G2JLE6 195 aa5.28□□□□□ -1.56
ATG3-202ENST00000402314 KRTAP4-8Q9BYQ9 185 aa5.28□□□□□ -1.56
ATG3-202ENST00000402314 KRTAP19-5Q3LI72 72 aa5.26□□□□□ -1.57
ATG3-202ENST00000402314 SSPOA2VEC9 5147 aa5.15□□□□□ -1.58
ATG3-202ENST00000402314 LCE3CQ5T5A8 94 aa5.11□□□□□ -1.59
ATG3-202ENST00000402314 KRTAP9-6A8MVA2 160 aa5.1□□□□□ -1.59
ATG3-202ENST00000402314 KRTAP4-7Q9BYR0 210 aa5.1□□□□□ -1.59
ATG3-202ENST00000402314 KRTAP19-7Q3SYF9 63 aa5.02□□□□□ -1.61
ATG3-202ENST00000402314 FCGBPQ9Y6R7 5405 aaPredicted RBP4.91□□□□□ -1.62
ATG3-202ENST00000402314 MUC12Q9UKN1 5478 aa4.91□□□□□ -1.62
ATG3-202ENST00000402314 MT1EP04732 61 aa4.85□□□□□ -1.63
ATG3-202ENST00000402314 MT1LQ93083 61 aa4.84□□□□□ -1.63
ATG3-202ENST00000402314 KRTAP2-3P0C7H8 128 aa4.8□□□□□ -1.64
ATG3-202ENST00000402314 KRTAP2-4Q9BYR9 128 aa4.8□□□□□ -1.64
ATG3-202ENST00000402314 KRTAP2-1Q9BYU5 128 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms