RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 TYMSOSQ8TAI1 123 aa3.59□□□□□ -1.84
CLIP4-202ENST00000401605 KRTAP10-4P60372 401 aaPredicted RBP3.58□□□□□ -1.84
CLIP4-202ENST00000401605 IGLV7-43P04211 117 aa3.58□□□□□ -1.84
CLIP4-202ENST00000401605 DEFB116Q30KQ4 102 aa3.58□□□□□ -1.84
CLIP4-202ENST00000401605 IGKV2-30P06310 120 aa3.57□□□□□ -1.84
CLIP4-202ENST00000401605 RPL37AP61513 92 aaKnown RBP3.57□□□□□ -1.84
CLIP4-202ENST00000401605 LINC00304Q8N9R0 145 aa3.57□□□□□ -1.84
CLIP4-202ENST00000401605 Q96NJ1 140 aa3.57□□□□□ -1.84
CLIP4-202ENST00000401605 KRTAP19-4Q3LI73 84 aa3.55□□□□□ -1.84
CLIP4-202ENST00000401605 SSBP3-AS1Q7Z2R9 100 aa3.55□□□□□ -1.84
CLIP4-202ENST00000401605 IGKV2-24A0A0C4DH68 120 aa3.54□□□□□ -1.84
CLIP4-202ENST00000401605 KRTAP4-9Q9BYQ8 210 aa3.54□□□□□ -1.84
CLIP4-202ENST00000401605 C6orf48Q9UBA6 75 aa3.54□□□□□ -1.84
CLIP4-202ENST00000401605 LRP1Q07954 4544 aaKnown RBP3.53□□□□□ -1.84
CLIP4-202ENST00000401605 HMCN2Q8NDA2 5059 aa3.53□□□□□ -1.84
CLIP4-202ENST00000401605 SPACA4Q8TDM5 124 aa3.53□□□□□ -1.84
CLIP4-202ENST00000401605 A0A1B0GU33 70 aa3.52□□□□□ -1.85
CLIP4-202ENST00000401605 FAM168BA1KXE4 195 aa3.52□□□□□ -1.85
CLIP4-202ENST00000401605 KRTAP11-1Q8IUC1 163 aa3.52□□□□□ -1.85
CLIP4-202ENST00000401605 GVQW2A0A096LPI5 108 aaPredicted RBP3.52□□□□□ -1.85
CLIP4-202ENST00000401605 FAT3Q8TDW7 4589 aa3.51□□□□□ -1.85
CLIP4-202ENST00000401605 KRTAP19-1Q8IUB9 90 aa3.5□□□□□ -1.85
CLIP4-202ENST00000401605 MT1HL1P0DM35 61 aa3.49□□□□□ -1.85
CLIP4-202ENST00000401605 UBR4Q5T4S7 5183 aa3.48□□□□□ -1.85
CLIP4-202ENST00000401605 PKHD1L1Q86WI1 4243 aa3.48□□□□□ -1.85
CLIP4-202ENST00000401605 A0A096LNI7 61 aa3.48□□□□□ -1.85
CLIP4-202ENST00000401605 A0A1W2PNN7 141 aa3.48□□□□□ -1.85
CLIP4-202ENST00000401605 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
CLIP4-202ENST00000401605 ANAPC11Q9NYG5 84 aa3.47□□□□□ -1.85
CLIP4-202ENST00000401605 SPINK6Q6UWN8 80 aa3.45□□□□□ -1.86
CLIP4-202ENST00000401605 DEFB105AQ8NG35 78 aa3.45□□□□□ -1.86
CLIP4-202ENST00000401605 IGKV2D-30A0A075B6S6 120 aa3.44□□□□□ -1.86
CLIP4-202ENST00000401605 TNXBP22105 4242 aa3.44□□□□□ -1.86
CLIP4-202ENST00000401605 A0A0G2JQZ4 141 aa3.44□□□□□ -1.86
CLIP4-202ENST00000401605 MMP24-AS1A0A0U1RRL7 71 aa3.44□□□□□ -1.86
CLIP4-202ENST00000401605 PSORS1C2Q9UIG4 136 aa3.44□□□□□ -1.86
CLIP4-202ENST00000401605 KRTAP10-8P60410 259 aa3.42□□□□□ -1.86
CLIP4-202ENST00000401605 CRIPTQ9P021 101 aa3.42□□□□□ -1.86
CLIP4-202ENST00000401605 UNQ6190/PRO20217Q6UXQ8 127 aa3.4□□□□□ -1.87
CLIP4-202ENST00000401605 LRP2P98164 4655 aa3.39□□□□□ -1.87
CLIP4-202ENST00000401605 PRO2289Q9P1D8 64 aa3.38□□□□□ -1.87
CLIP4-202ENST00000401605 H0YAA0 97 aa3.38□□□□□ -1.87
CLIP4-202ENST00000401605 Q6ZRX8 168 aa3.38□□□□□ -1.87
CLIP4-202ENST00000401605 KRTAP7-1Q8IUC3 87 aa3.38□□□□□ -1.87
CLIP4-202ENST00000401605 RNF213Q63HN8 5207 aa3.37□□□□□ -1.87
CLIP4-202ENST00000401605 IGFL1Q6UW32 110 aa3.37□□□□□ -1.87
CLIP4-202ENST00000401605 TPRXLQ17RH7 258 aa3.36□□□□□ -1.87
CLIP4-202ENST00000401605 MRPL34Q9BQ48 92 aaKnown RBP3.36□□□□□ -1.87
CLIP4-202ENST00000401605 KRTAP5-3Q6L8H2 238 aa3.34□□□□□ -1.87
CLIP4-202ENST00000401605 KRTAP1-4P0C5Y4 121 aa3.33□□□□□ -1.88
CLIP4-202ENST00000401605 KRTAP4-11Q9BYQ6 195 aa3.33□□□□□ -1.88
CLIP4-202ENST00000401605 LCE5AQ5TCM9 118 aa3.32□□□□□ -1.88
CLIP4-202ENST00000401605 R4GN34 69 aa3.3□□□□□ -1.88
CLIP4-202ENST00000401605 SPRR1AP35321 89 aa3.28□□□□□ -1.88
CLIP4-202ENST00000401605 LPAP08519 4548 aa3.28□□□□□ -1.88
CLIP4-202ENST00000401605 COX6B2Q6YFQ2 88 aa3.27□□□□□ -1.89
CLIP4-202ENST00000401605 PLAC4Q8WY50 150 aa3.27□□□□□ -1.89
CLIP4-202ENST00000401605 KRTAP9-8Q9BYQ0 159 aa3.27□□□□□ -1.89
CLIP4-202ENST00000401605 KRTAP13-3Q3SY46 172 aa3.27□□□□□ -1.89
CLIP4-202ENST00000401605 H1FX-AS1Q4G0G2 97 aa3.27□□□□□ -1.89
CLIP4-202ENST00000401605 KRTAP13-1Q8IUC0 172 aa3.26□□□□□ -1.89
CLIP4-202ENST00000401605 MUC2Q02817 5179 aa3.25□□□□□ -1.89
CLIP4-202ENST00000401605 PRLHP81277 87 aa3.24□□□□□ -1.89
CLIP4-202ENST00000401605 KRTAP13-2Q52LG2 175 aa3.24□□□□□ -1.89
CLIP4-202ENST00000401605 KRTAP9-7A8MTY7 169 aa3.24□□□□□ -1.89
CLIP4-202ENST00000401605 C10orf95Q9H7T3 257 aa3.22□□□□□ -1.89
CLIP4-202ENST00000401605 RPL37P61927 97 aaKnown RBP3.21□□□□□ -1.89
CLIP4-202ENST00000401605 LCE4AQ5TA78 99 aa3.21□□□□□ -1.9
CLIP4-202ENST00000401605 INE1O15225 51 aa3.19□□□□□ -1.9
CLIP4-202ENST00000401605 SPRR1BP22528 89 aa3.18□□□□□ -1.9
CLIP4-202ENST00000401605 SPINK1P00995 79 aa3.16□□□□□ -1.9
CLIP4-202ENST00000401605 FAT4Q6V0I7 4981 aa3.15□□□□□ -1.91
CLIP4-202ENST00000401605 MUC17Q685J3 4493 aa3.15□□□□□ -1.91
CLIP4-202ENST00000401605 RPS29P62273 56 aaKnown RBP3.14□□□□□ -1.91
CLIP4-202ENST00000401605 KRTAP4-1Q9BYQ7 146 aa3.05□□□□□ -1.92
CLIP4-202ENST00000401605 KRTAP12-2P59991 146 aa3.04□□□□□ -1.92
CLIP4-202ENST00000401605 C9orf92A6NGG3 77 aa3.02□□□□□ -1.93
CLIP4-202ENST00000401605 KRTAP9-3Q9BYQ3 159 aa3.02□□□□□ -1.93
CLIP4-202ENST00000401605 S4R3F8 94 aa3.01□□□□□ -1.93
CLIP4-202ENST00000401605 PP632Q6XCG6 107 aa2.99□□□□□ -1.93
CLIP4-202ENST00000401605 KRTAP19-2Q3LHN2 52 aa2.98□□□□□ -1.93
CLIP4-202ENST00000401605 MT1HP80294 61 aa2.97□□□□□ -1.93
CLIP4-202ENST00000401605 A0A0D9SG42 100 aa2.96□□□□□ -1.94
CLIP4-202ENST00000401605 FSIP2Q5CZC0 6907 aa2.95□□□□□ -1.94
CLIP4-202ENST00000401605 CRCT1Q9UGL9 99 aa2.94□□□□□ -1.94
CLIP4-202ENST00000401605 M0R2T5 61 aa2.93□□□□□ -1.94
CLIP4-202ENST00000401605 KRTAP10-6P60371 365 aaPredicted RBP2.92□□□□□ -1.94
CLIP4-202ENST00000401605 LCE1AQ5T7P2 110 aa2.92□□□□□ -1.94
CLIP4-202ENST00000401605 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
CLIP4-202ENST00000401605 FLGP20930 4061 aaPredicted RBP2.88□□□□□ -1.95
CLIP4-202ENST00000401605 KRTAP13-4Q3LI77 160 aa2.88□□□□□ -1.95
CLIP4-202ENST00000401605 SPRR5A0A1B0GTR4 108 aa2.87□□□□□ -1.95
CLIP4-202ENST00000401605 KRTAP12-1P59990 96 aa2.85□□□□□ -1.95
CLIP4-202ENST00000401605 MT3P25713 68 aa2.82□□□□□ -1.96
CLIP4-202ENST00000401605 KRTAP2-2Q9BYT5 123 aa2.8□□□□□ -1.96
CLIP4-202ENST00000401605 USH2AO75445 5202 aa2.77□□□□□ -1.97
CLIP4-202ENST00000401605 MT2AP02795 61 aa2.75□□□□□ -1.97
CLIP4-202ENST00000401605 SSPOA2VEC9 5147 aa2.74□□□□□ -1.97
CLIP4-202ENST00000401605 M0QZ58 72 aa2.74□□□□□ -1.97
CLIP4-202ENST00000401605 MT1FP04733 61 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms