RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 KRTAP10-8P60410 259 aa5.49□□□□□ -1.53
PPP4R1-203ENST00000400556 KRTAP13-4Q3LI77 160 aa5.45□□□□□ -1.54
PPP4R1-203ENST00000400556 LPAP08519 4548 aa5.45□□□□□ -1.54
PPP4R1-203ENST00000400556 KRTAP25-1Q3LHN0 102 aa5.45□□□□□ -1.54
PPP4R1-203ENST00000400556 TNXBP22105 4242 aa5.45□□□□□ -1.54
PPP4R1-203ENST00000400556 KRTAP3-3Q9BYR6 98 aa5.43□□□□□ -1.54
PPP4R1-203ENST00000400556 K7ERS5 55 aa5.42□□□□□ -1.54
PPP4R1-203ENST00000400556 KRTAP10-6P60371 365 aaPredicted RBP5.42□□□□□ -1.54
PPP4R1-203ENST00000400556 Q5VSD8 79 aa5.41□□□□□ -1.54
PPP4R1-203ENST00000400556 KIAA1109Q2LD37 5005 aa5.4□□□□□ -1.54
PPP4R1-203ENST00000400556 P0C880 135 aa5.4□□□□□ -1.55
PPP4R1-203ENST00000400556 XP32Q5T750 250 aa5.39□□□□□ -1.55
PPP4R1-203ENST00000400556 KRTAP17-1Q9BYP8 105 aa5.39□□□□□ -1.55
PPP4R1-203ENST00000400556 LRP2P98164 4655 aa5.38□□□□□ -1.55
PPP4R1-203ENST00000400556 RPL37P61927 97 aaKnown RBP5.37□□□□□ -1.55
PPP4R1-203ENST00000400556 S4R3F8 94 aa5.37□□□□□ -1.55
PPP4R1-203ENST00000400556 KRTAP3-2Q9BYR7 98 aa5.36□□□□□ -1.55
PPP4R1-203ENST00000400556 H3BS24 57 aa5.35□□□□□ -1.55
PPP4R1-203ENST00000400556 C10orf95Q9H7T3 257 aa5.35□□□□□ -1.55
PPP4R1-203ENST00000400556 RYR3Q15413 4870 aa5.35□□□□□ -1.55
PPP4R1-203ENST00000400556 ROMO1P60602 79 aa5.33□□□□□ -1.56
PPP4R1-203ENST00000400556 SPINT4Q6UDR6 99 aa5.3□□□□□ -1.56
PPP4R1-203ENST00000400556 RYR1P21817 5038 aa5.29□□□□□ -1.56
PPP4R1-203ENST00000400556 TPRXLQ17RH7 258 aa5.28□□□□□ -1.56
PPP4R1-203ENST00000400556 KRTAP12-2P59991 146 aa5.27□□□□□ -1.57
PPP4R1-203ENST00000400556 ABCA13Q86UQ4 5058 aa5.25□□□□□ -1.57
PPP4R1-203ENST00000400556 MT1HL1P0DM35 61 aa5.22□□□□□ -1.57
PPP4R1-203ENST00000400556 KRTAP21-3Q3LHN1 58 aa5.22□□□□□ -1.57
PPP4R1-203ENST00000400556 EPPK1P58107 5090 aaKnown RBP5.19□□□□□ -1.58
PPP4R1-203ENST00000400556 KRTAP12-1P59990 96 aa5.17□□□□□ -1.58
PPP4R1-203ENST00000400556 KRTAP4-5Q9BYR2 181 aa5.11□□□□□ -1.59
PPP4R1-203ENST00000400556 M0QZ58 72 aa5.1□□□□□ -1.59
PPP4R1-203ENST00000400556 MUC2Q02817 5179 aa5.07□□□□□ -1.6
PPP4R1-203ENST00000400556 LORP23490 312 aaPredicted RBP5.05□□□□□ -1.6
PPP4R1-203ENST00000400556 R4GN34 69 aa5.05□□□□□ -1.6
PPP4R1-203ENST00000400556 NDUFAF8A1L188 74 aa5.03□□□□□ -1.6
PPP4R1-203ENST00000400556 KRTAP4-1Q9BYQ7 146 aa4.98□□□□□ -1.61
PPP4R1-203ENST00000400556 KRTAP15-1Q3LI76 137 aa4.97□□□□□ -1.61
PPP4R1-203ENST00000400556 MUC17Q685J3 4493 aa4.95□□□□□ -1.62
PPP4R1-203ENST00000400556 HERC2O95714 4834 aa4.9□□□□□ -1.63
PPP4R1-203ENST00000400556 J3QL48 77 aa4.89□□□□□ -1.63
PPP4R1-203ENST00000400556 SEC61BP60468 96 aaKnown RBP4.89□□□□□ -1.63
PPP4R1-203ENST00000400556 CAMK2N1Q7Z7J9 78 aa4.83□□□□□ -1.64
PPP4R1-203ENST00000400556 FAT4Q6V0I7 4981 aa4.81□□□□□ -1.64
PPP4R1-203ENST00000400556 PCLOQ9Y6V0 5065 aa4.78□□□□□ -1.64
PPP4R1-203ENST00000400556 HERC1Q15751 4861 aa4.78□□□□□ -1.64
PPP4R1-203ENST00000400556 PLAC4Q8WY50 150 aa4.77□□□□□ -1.65
PPP4R1-203ENST00000400556 KRTAP19-2Q3LHN2 52 aa4.76□□□□□ -1.65
PPP4R1-203ENST00000400556 RNF213Q63HN8 5207 aa4.68□□□□□ -1.66
PPP4R1-203ENST00000400556 FLGP20930 4061 aaPredicted RBP4.68□□□□□ -1.66
PPP4R1-203ENST00000400556 BIRC6Q9NR09 4857 aa4.62□□□□□ -1.67
PPP4R1-203ENST00000400556 LUZP6Q538Z0 58 aa4.57□□□□□ -1.68
PPP4R1-203ENST00000400556 TNP1P09430 55 aa4.56□□□□□ -1.68
PPP4R1-203ENST00000400556 PP632Q6XCG6 107 aa4.56□□□□□ -1.68
PPP4R1-203ENST00000400556 HMCN2Q8NDA2 5059 aa4.56□□□□□ -1.68
PPP4R1-203ENST00000400556 UBR4Q5T4S7 5183 aa4.55□□□□□ -1.68
PPP4R1-203ENST00000400556 M0R2T5 61 aa4.55□□□□□ -1.68
PPP4R1-203ENST00000400556 LCE2CQ5TA81 110 aa4.48□□□□□ -1.69
PPP4R1-203ENST00000400556 KRTAP19-1Q8IUB9 90 aa4.45□□□□□ -1.7
PPP4R1-203ENST00000400556 KRTAP10-10P60014 251 aa4.41□□□□□ -1.7
PPP4R1-203ENST00000400556 LCE3AQ5TA76 89 aa4.39□□□□□ -1.71
PPP4R1-203ENST00000400556 SPRR2GQ9BYE4 73 aa4.38□□□□□ -1.71
PPP4R1-203ENST00000400556 MT1FP04733 61 aa4.37□□□□□ -1.71
PPP4R1-203ENST00000400556 MT1HP80294 61 aa4.37□□□□□ -1.71
PPP4R1-203ENST00000400556 A0A0A0MQY5 61 aa4.34□□□□□ -1.71
PPP4R1-203ENST00000400556 MT2AP02795 61 aa4.33□□□□□ -1.72
PPP4R1-203ENST00000400556 SPRR5A0A1B0GTR4 108 aa4.28□□□□□ -1.72
PPP4R1-203ENST00000400556 KRTAP23-1A1A580 65 aa4.27□□□□□ -1.73
PPP4R1-203ENST00000400556 KRTAP9-8Q9BYQ0 159 aa4.27□□□□□ -1.73
PPP4R1-203ENST00000400556 USH2AO75445 5202 aa4.25□□□□□ -1.73
PPP4R1-203ENST00000400556 KMT2DO14686 5537 aa4.21□□□□□ -1.74
PPP4R1-203ENST00000400556 MT1BP07438 61 aa4.2□□□□□ -1.74
PPP4R1-203ENST00000400556 KRTAP10-5P60370 271 aa4.2□□□□□ -1.74
PPP4R1-203ENST00000400556 MT1XP80297 61 aa4.19□□□□□ -1.74
PPP4R1-203ENST00000400556 KRTAP10-7P60409 375 aaPredicted RBP4.16□□□□□ -1.74
PPP4R1-203ENST00000400556 KRTAP10-12P60413 245 aa4.14□□□□□ -1.75
PPP4R1-203ENST00000400556 KRTAP19-8Q3LI54 63 aa4.14□□□□□ -1.75
PPP4R1-203ENST00000400556 KRTAP8-1Q8IUC2 63 aa4.14□□□□□ -1.75
PPP4R1-203ENST00000400556 KRTAP12-3P60328 96 aa4.13□□□□□ -1.75
PPP4R1-203ENST00000400556 KRTAP9-3Q9BYQ3 159 aa4.06□□□□□ -1.76
PPP4R1-203ENST00000400556 KRTAP19-5Q3LI72 72 aa3.98□□□□□ -1.77
PPP4R1-203ENST00000400556 LCE2BO14633 110 aa3.97□□□□□ -1.77
PPP4R1-203ENST00000400556 FSIP2Q5CZC0 6907 aa3.97□□□□□ -1.77
PPP4R1-203ENST00000400556 KRTAP4-8A0A0G2JLE6 195 aa3.97□□□□□ -1.77
PPP4R1-203ENST00000400556 KRTAP4-8Q9BYQ9 185 aa3.97□□□□□ -1.77
PPP4R1-203ENST00000400556 PRO2289Q9P1D8 64 aa3.95□□□□□ -1.78
PPP4R1-203ENST00000400556 KRTAP4-7Q9BYR0 210 aa3.87□□□□□ -1.79
PPP4R1-203ENST00000400556 LCE3CQ5T5A8 94 aa3.86□□□□□ -1.79
PPP4R1-203ENST00000400556 KRTAP9-6A8MVA2 160 aa3.83□□□□□ -1.8
PPP4R1-203ENST00000400556 INE1O15225 51 aa3.8□□□□□ -1.8
PPP4R1-203ENST00000400556 KRTAP19-7Q3SYF9 63 aa3.73□□□□□ -1.81
PPP4R1-203ENST00000400556 LCE2AQ5TA79 106 aaPredicted RBP3.73□□□□□ -1.81
PPP4R1-203ENST00000400556 SSPOA2VEC9 5147 aa3.7□□□□□ -1.82
PPP4R1-203ENST00000400556 DSTQ03001 7570 aaKnown RBP3.68□□□□□ -1.82
PPP4R1-203ENST00000400556 MUC12Q9UKN1 5478 aa3.67□□□□□ -1.82
PPP4R1-203ENST00000400556 FCGBPQ9Y6R7 5405 aaPredicted RBP3.64□□□□□ -1.83
PPP4R1-203ENST00000400556 MT1LQ93083 61 aa3.62□□□□□ -1.83
PPP4R1-203ENST00000400556 KRTAP4-3Q9BYR4 195 aa3.6□□□□□ -1.83
PPP4R1-203ENST00000400556 MT1EP04732 61 aa3.6□□□□□ -1.83
PPP4R1-203ENST00000400556 LOC100996750A0A140TA64 210 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 178.8 ms