RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 A0A087WVE0 104 aa5.11□□□□□ -1.59
LINC00544-201ENST00000400540 CRIPTQ9P021 101 aa5.09□□□□□ -1.59
LINC00544-201ENST00000400540 A0A1W2PPM0 123 aa5.07□□□□□ -1.6
LINC00544-201ENST00000400540 C9orf118A6NHY6 69 aa5.07□□□□□ -1.6
LINC00544-201ENST00000400540 TAX1BP3O14907 124 aa5.05□□□□□ -1.6
LINC00544-201ENST00000400540 MT1XP80297 61 aa5.03□□□□□ -1.6
LINC00544-201ENST00000400540 UBL5Q9BZL1 73 aa5.03□□□□□ -1.6
LINC00544-201ENST00000400540 LCE1AQ5T7P2 110 aa5.01□□□□□ -1.61
LINC00544-201ENST00000400540 CYP4F30PQ9H0H9 118 aa5.01□□□□□ -1.61
LINC00544-201ENST00000400540 TP53AIP1Q9HCN2 124 aa5.01□□□□□ -1.61
LINC00544-201ENST00000400540 KRTAP8-1Q8IUC2 63 aa5□□□□□ -1.61
LINC00544-201ENST00000400540 KRTAP2-2Q9BYT5 123 aa5□□□□□ -1.61
LINC00544-201ENST00000400540 KRTAP2-1Q9BYU5 128 aa5□□□□□ -1.61
LINC00544-201ENST00000400540 KRTAP9-9Q9BYP9 154 aa4.99□□□□□ -1.61
LINC00544-201ENST00000400540 KRTAP9-4Q9BYQ2 154 aa4.99□□□□□ -1.61
LINC00544-201ENST00000400540 K7EP34 96 aa4.98□□□□□ -1.61
LINC00544-201ENST00000400540 SMIM6P0DI80 62 aa4.98□□□□□ -1.61
LINC00544-201ENST00000400540 PRO2289Q9P1D8 64 aa4.98□□□□□ -1.61
LINC00544-201ENST00000400540 KRTAP19-4Q3LI73 84 aa4.97□□□□□ -1.61
LINC00544-201ENST00000400540 SPCS1Q9Y6A9 102 aa4.97□□□□□ -1.61
LINC00544-201ENST00000400540 A8MUN3 132 aa4.95□□□□□ -1.62
LINC00544-201ENST00000400540 H0YAA0 97 aa4.95□□□□□ -1.62
LINC00544-201ENST00000400540 SPRR2DP22532 72 aa4.95□□□□□ -1.62
LINC00544-201ENST00000400540 ADM2Q7Z4H4 148 aa4.94□□□□□ -1.62
LINC00544-201ENST00000400540 PRO0461Q9UI25 63 aa4.94□□□□□ -1.62
LINC00544-201ENST00000400540 TRAV22A0A0B4J277 110 aa4.92□□□□□ -1.62
LINC00544-201ENST00000400540 KRTAP4-8A0A0G2JLE6 195 aa4.92□□□□□ -1.62
LINC00544-201ENST00000400540 NDUFC1O43677 76 aa4.92□□□□□ -1.62
LINC00544-201ENST00000400540 KRTAP12-2P59991 146 aa4.92□□□□□ -1.62
LINC00544-201ENST00000400540 LOC101927531A0A1B0GV80 90 aa4.91□□□□□ -1.62
LINC00544-201ENST00000400540 PLAC4Q8WY50 150 aa4.9□□□□□ -1.63
LINC00544-201ENST00000400540 LCE4AQ5TA78 99 aa4.87□□□□□ -1.63
LINC00544-201ENST00000400540 H0Y9P7 68 aa4.82□□□□□ -1.64
LINC00544-201ENST00000400540 ACYP1P07311 99 aa4.81□□□□□ -1.64
LINC00544-201ENST00000400540 P0C880 135 aa4.81□□□□□ -1.64
LINC00544-201ENST00000400540 KRTAP10-7P60409 375 aaPredicted RBP4.81□□□□□ -1.64
LINC00544-201ENST00000400540 LCE1DQ5T752 114 aa4.81□□□□□ -1.64
LINC00544-201ENST00000400540 R4GN34 69 aa4.81□□□□□ -1.64
LINC00544-201ENST00000400540 GPR98Q8WXG9 6306 aa4.8□□□□□ -1.64
LINC00544-201ENST00000400540 M0QZ58 72 aa4.78□□□□□ -1.64
LINC00544-201ENST00000400540 ATOX1O00244 68 aa4.76□□□□□ -1.65
LINC00544-201ENST00000400540 UQCRQO14949 82 aa4.76□□□□□ -1.65
LINC00544-201ENST00000400540 ETDBQ3ZM63 59 aa4.76□□□□□ -1.65
LINC00544-201ENST00000400540 COL5A1-AS1Q5SY13 56 aa4.76□□□□□ -1.65
LINC00544-201ENST00000400540 KRTAP10-12P60413 245 aa4.75□□□□□ -1.65
LINC00544-201ENST00000400540 DSTQ03001 7570 aaKnown RBP4.75□□□□□ -1.65
LINC00544-201ENST00000400540 LINC01554Q52M75 96 aa4.74□□□□□ -1.65
LINC00544-201ENST00000400540 LOC105371267A0A1B0GV96 52 aa4.73□□□□□ -1.65
LINC00544-201ENST00000400540 HIST1H4AP62805 103 aaKnown RBP4.72□□□□□ -1.65
LINC00544-201ENST00000400540 F8W1H4 67 aa4.7□□□□□ -1.66
LINC00544-201ENST00000400540 C20orf197Q8N268 126 aa4.7□□□□□ -1.66
LINC00544-201ENST00000400540 LINC00208Q96KT6 92 aa4.7□□□□□ -1.66
LINC00544-201ENST00000400540 KRTAP4-7Q9BYR0 210 aa4.7□□□□□ -1.66
LINC00544-201ENST00000400540 GTF2H5Q6ZYL4 71 aa4.69□□□□□ -1.66
LINC00544-201ENST00000400540 ATP5EP2Q5VTU8 51 aa4.66□□□□□ -1.66
LINC00544-201ENST00000400540 KRTAP4-9Q9BYQ8 210 aa4.64□□□□□ -1.67
LINC00544-201ENST00000400540 MP68P56378 58 aa4.6□□□□□ -1.67
LINC00544-201ENST00000400540 OCR1Q9BZK8 76 aa4.6□□□□□ -1.67
LINC00544-201ENST00000400540 FAM240AA0A1B0GVK7 77 aa4.59□□□□□ -1.67
LINC00544-201ENST00000400540 DMAC1Q96GE9 116 aa4.59□□□□□ -1.67
LINC00544-201ENST00000400540 MT-ATP8P03928 68 aa4.56□□□□□ -1.68
LINC00544-201ENST00000400540 LCE5AQ5TCM9 118 aa4.55□□□□□ -1.68
LINC00544-201ENST00000400540 LINC00643Q86TS7 51 aa4.51□□□□□ -1.69
LINC00544-201ENST00000400540 KRTAP19-7Q3SYF9 63 aa4.5□□□□□ -1.69
LINC00544-201ENST00000400540 KRTAP4-11Q9BYQ6 195 aa4.5□□□□□ -1.69
LINC00544-201ENST00000400540 H3BPC8 53 aa4.48□□□□□ -1.69
LINC00544-201ENST00000400540 KRTAP4-2Q9BYR5 136 aa4.48□□□□□ -1.69
LINC00544-201ENST00000400540 MT1EP04732 61 aa4.47□□□□□ -1.69
LINC00544-201ENST00000400540 KRTAP19-3Q7Z4W3 81 aa4.47□□□□□ -1.69
LINC00544-201ENST00000400540 TRAV7A0A075B6U4 112 aa4.46□□□□□ -1.7
LINC00544-201ENST00000400540 PCP4L1A6NKN8 68 aa4.46□□□□□ -1.7
LINC00544-201ENST00000400540 HMCN1Q96RW7 5635 aa4.46□□□□□ -1.7
LINC00544-201ENST00000400540 KRTAP23-1A1A580 65 aa4.45□□□□□ -1.7
LINC00544-201ENST00000400540 AHNAK2Q8IVF2 5795 aa4.41□□□□□ -1.7
LINC00544-201ENST00000400540 ACYP2P14621 99 aa4.4□□□□□ -1.71
LINC00544-201ENST00000400540 KRTAP13-4Q3LI77 160 aa4.4□□□□□ -1.71
LINC00544-201ENST00000400540 CYSTM1Q9H1C7 97 aa4.39□□□□□ -1.71
LINC00544-201ENST00000400540 CAMK2N1Q7Z7J9 78 aa4.38□□□□□ -1.71
LINC00544-201ENST00000400540 MT4P47944 62 aa4.37□□□□□ -1.71
LINC00544-201ENST00000400540 SPTSSBQ8NFR3 76 aa4.37□□□□□ -1.71
LINC00544-201ENST00000400540 SCGB1A1P11684 91 aa4.35□□□□□ -1.71
LINC00544-201ENST00000400540 CHKB-CPT1BH3BT56 60 aa4.32□□□□□ -1.72
LINC00544-201ENST00000400540 MT1GP13640 62 aa4.31□□□□□ -1.72
LINC00544-201ENST00000400540 KRTAP19-5Q3LI72 72 aa4.31□□□□□ -1.72
LINC00544-201ENST00000400540 A0A0D9SG42 100 aa4.28□□□□□ -1.72
LINC00544-201ENST00000400540 MT1MQ8N339 61 aa4.27□□□□□ -1.73
LINC00544-201ENST00000400540 KRTAP5-10Q6L8G5 202 aa4.26□□□□□ -1.73
LINC00544-201ENST00000400540 PP632Q6XCG6 107 aa4.26□□□□□ -1.73
LINC00544-201ENST00000400540 KRTAP4-3Q9BYR4 195 aa4.23□□□□□ -1.73
LINC00544-201ENST00000400540 KRTAP5-4Q6L8H1 288 aa4.22□□□□□ -1.73
LINC00544-201ENST00000400540 MT1LQ93083 61 aa4.22□□□□□ -1.73
LINC00544-201ENST00000400540 PCP4P48539 62 aa4.2□□□□□ -1.74
LINC00544-201ENST00000400540 A0A1B0GV90 55 aa4.19□□□□□ -1.74
LINC00544-201ENST00000400540 SNURFQ9Y675 71 aa4.18□□□□□ -1.74
LINC00544-201ENST00000400540 KRTAP15-1Q3LI76 137 aa4.17□□□□□ -1.74
LINC00544-201ENST00000400540 J3QR89 54 aa4.15□□□□□ -1.75
LINC00544-201ENST00000400540 SPATA8Q6RVD6 105 aa4.15□□□□□ -1.75
LINC00544-201ENST00000400540 SPINT4Q6UDR6 99 aa4.15□□□□□ -1.75
LINC00544-201ENST00000400540 SMIM20Q8N5G0 67 aa4.13□□□□□ -1.75
LINC00544-201ENST00000400540 KRTAP12-1P59990 96 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms