RNA–Protein interactions for RNA: ENST00000399953.7

NPRL3-201, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 1 (best) BASIC

Gene NPRL3, Length 2,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-201ENST00000399953 KRTAP12-2P59991 146 aa8.53□□□□□ -1.04
NPRL3-201ENST00000399953 XP32Q5T750 250 aa8.52□□□□□ -1.05
NPRL3-201ENST00000399953 KRTAP3-3Q9BYR6 98 aa8.51□□□□□ -1.05
NPRL3-201ENST00000399953 VPS13BQ7Z7G8 4022 aa8.47□□□□□ -1.05
NPRL3-201ENST00000399953 PKD1P98161 4303 aa8.44□□□□□ -1.06
NPRL3-201ENST00000399953 KRTAP12-1P59990 96 aa8.42□□□□□ -1.06
NPRL3-201ENST00000399953 FAT1Q14517 4588 aa8.39□□□□□ -1.07
NPRL3-201ENST00000399953 KRTAP10-1P60331 282 aa8.39□□□□□ -1.07
NPRL3-201ENST00000399953 KMT2CQ8NEZ4 4911 aaKnown RBP8.33□□□□□ -1.08
NPRL3-201ENST00000399953 SACSQ9NZJ4 4579 aa8.32□□□□□ -1.08
NPRL3-201ENST00000399953 SMR3BP02814 79 aaPredicted RBP8.32□□□□□ -1.08
NPRL3-201ENST00000399953 PLAC4Q8WY50 150 aa8.31□□□□□ -1.08
NPRL3-201ENST00000399953 DYNC1H1Q14204 4646 aaKnown RBP8.21□□□□□ -1.09
NPRL3-201ENST00000399953 M0QZ58 72 aa8.17□□□□□ -1.1
NPRL3-201ENST00000399953 LRP1Q07954 4544 aaKnown RBP8.11□□□□□ -1.11
NPRL3-201ENST00000399953 PKHD1L1Q86WI1 4243 aa8.11□□□□□ -1.11
NPRL3-201ENST00000399953 KRTAP10-8P60410 259 aa8.11□□□□□ -1.11
NPRL3-201ENST00000399953 SEC61BP60468 96 aaKnown RBP8.09□□□□□ -1.11
NPRL3-201ENST00000399953 APOBP04114 4563 aaKnown RBP8.09□□□□□ -1.11
NPRL3-201ENST00000399953 MYCBP2O75592 4640 aa8.07□□□□□ -1.12
NPRL3-201ENST00000399953 RYR2Q92736 4967 aa8.02□□□□□ -1.13
NPRL3-201ENST00000399953 RYR3Q15413 4870 aa8.01□□□□□ -1.13
NPRL3-201ENST00000399953 KIAA1109Q2LD37 5005 aa7.9□□□□□ -1.14
NPRL3-201ENST00000399953 FAT3Q8TDW7 4589 aa7.9□□□□□ -1.15
NPRL3-201ENST00000399953 PP632Q6XCG6 107 aa7.86□□□□□ -1.15
NPRL3-201ENST00000399953 HSPG2P98160 4391 aa7.81□□□□□ -1.16
NPRL3-201ENST00000399953 R4GN34 69 aa7.8□□□□□ -1.16
NPRL3-201ENST00000399953 A0A1B0GVY2 172 aa7.79□□□□□ -1.16
NPRL3-201ENST00000399953 KRTAP10-4P60372 401 aaPredicted RBP7.79□□□□□ -1.16
NPRL3-201ENST00000399953 EPPK1P58107 5090 aaKnown RBP7.77□□□□□ -1.16
NPRL3-201ENST00000399953 KRTAP17-1Q9BYP8 105 aa7.77□□□□□ -1.17
NPRL3-201ENST00000399953 TNXBP22105 4242 aa7.75□□□□□ -1.17
NPRL3-201ENST00000399953 LPAP08519 4548 aa7.74□□□□□ -1.17
NPRL3-201ENST00000399953 CAMK2N1Q7Z7J9 78 aa7.73□□□□□ -1.17
NPRL3-201ENST00000399953 RYR1P21817 5038 aa7.68□□□□□ -1.18
NPRL3-201ENST00000399953 KRTAP21-3Q3LHN1 58 aa7.68□□□□□ -1.18
NPRL3-201ENST00000399953 ABCA13Q86UQ4 5058 aa7.64□□□□□ -1.19
NPRL3-201ENST00000399953 Q5VSD8 79 aa7.62□□□□□ -1.19
NPRL3-201ENST00000399953 PRO2289Q9P1D8 64 aa7.61□□□□□ -1.19
NPRL3-201ENST00000399953 SPRR5A0A1B0GTR4 108 aa7.61□□□□□ -1.19
NPRL3-201ENST00000399953 LRP2P98164 4655 aa7.6□□□□□ -1.19
NPRL3-201ENST00000399953 LORP23490 312 aaPredicted RBP7.51□□□□□ -1.21
NPRL3-201ENST00000399953 MUC2Q02817 5179 aa7.44□□□□□ -1.22
NPRL3-201ENST00000399953 KRTAP4-5Q9BYR2 181 aa7.43□□□□□ -1.22
NPRL3-201ENST00000399953 KRTAP23-1A1A580 65 aa7.39□□□□□ -1.23
NPRL3-201ENST00000399953 INE1O15225 51 aa7.36□□□□□ -1.23
NPRL3-201ENST00000399953 TNP1P09430 55 aa7.32□□□□□ -1.24
NPRL3-201ENST00000399953 MT1HL1P0DM35 61 aa7.31□□□□□ -1.24
NPRL3-201ENST00000399953 HERC2O95714 4834 aa7.24□□□□□ -1.25
NPRL3-201ENST00000399953 HERC1Q15751 4861 aa7.17□□□□□ -1.26
NPRL3-201ENST00000399953 PCLOQ9Y6V0 5065 aa7.05□□□□□ -1.28
NPRL3-201ENST00000399953 FAT4Q6V0I7 4981 aa7.02□□□□□ -1.29
NPRL3-201ENST00000399953 RNF213Q63HN8 5207 aa7.01□□□□□ -1.29
NPRL3-201ENST00000399953 J3QL48 77 aa6.98□□□□□ -1.29
NPRL3-201ENST00000399953 MUC17Q685J3 4493 aa6.96□□□□□ -1.29
NPRL3-201ENST00000399953 KRTAP4-1Q9BYQ7 146 aa6.96□□□□□ -1.3
NPRL3-201ENST00000399953 UBR4Q5T4S7 5183 aa6.83□□□□□ -1.32
NPRL3-201ENST00000399953 LCE3AQ5TA76 89 aa6.82□□□□□ -1.32
NPRL3-201ENST00000399953 BIRC6Q9NR09 4857 aa6.81□□□□□ -1.32
NPRL3-201ENST00000399953 KRTAP19-2Q3LHN2 52 aa6.81□□□□□ -1.32
NPRL3-201ENST00000399953 FLGP20930 4061 aaPredicted RBP6.8□□□□□ -1.32
NPRL3-201ENST00000399953 HMCN2Q8NDA2 5059 aa6.7□□□□□ -1.34
NPRL3-201ENST00000399953 KRTAP8-1Q8IUC2 63 aa6.65□□□□□ -1.35
NPRL3-201ENST00000399953 SPRR2GQ9BYE4 73 aa6.52□□□□□ -1.37
NPRL3-201ENST00000399953 KRTAP10-12P60413 245 aa6.52□□□□□ -1.37
NPRL3-201ENST00000399953 KRTAP10-10P60014 251 aa6.46□□□□□ -1.37
NPRL3-201ENST00000399953 KRTAP12-3P60328 96 aa6.46□□□□□ -1.38
NPRL3-201ENST00000399953 KRTAP19-1Q8IUB9 90 aa6.44□□□□□ -1.38
NPRL3-201ENST00000399953 M0R2T5 61 aa6.38□□□□□ -1.39
NPRL3-201ENST00000399953 LCE2CQ5TA81 110 aa6.29□□□□□ -1.4
NPRL3-201ENST00000399953 KRTAP10-5P60370 271 aa6.28□□□□□ -1.4
NPRL3-201ENST00000399953 USH2AO75445 5202 aa6.27□□□□□ -1.41
NPRL3-201ENST00000399953 MT1HP80294 61 aa6.15□□□□□ -1.42
NPRL3-201ENST00000399953 MT1XP80297 61 aa6.13□□□□□ -1.43
NPRL3-201ENST00000399953 LCE3CQ5T5A8 94 aa6.12□□□□□ -1.43
NPRL3-201ENST00000399953 KRTAP19-8Q3LI54 63 aa6.09□□□□□ -1.43
NPRL3-201ENST00000399953 MT1FP04733 61 aa6.09□□□□□ -1.43
NPRL3-201ENST00000399953 FSIP2Q5CZC0 6907 aa6.05□□□□□ -1.44
NPRL3-201ENST00000399953 KRTAP2-3P0C7H8 128 aa6.05□□□□□ -1.44
NPRL3-201ENST00000399953 KRTAP2-4Q9BYR9 128 aa6.05□□□□□ -1.44
NPRL3-201ENST00000399953 KRTAP2-1Q9BYU5 128 aa6.05□□□□□ -1.44
NPRL3-201ENST00000399953 KMT2DO14686 5537 aa6.04□□□□□ -1.44
NPRL3-201ENST00000399953 KRTAP10-7P60409 375 aaPredicted RBP6.04□□□□□ -1.44
NPRL3-201ENST00000399953 MT2AP02795 61 aa6.02□□□□□ -1.45
NPRL3-201ENST00000399953 MT1BP07438 61 aa5.99□□□□□ -1.45
NPRL3-201ENST00000399953 KRTAP9-8Q9BYQ0 159 aa5.97□□□□□ -1.45
NPRL3-201ENST00000399953 KRTAP9-6A8MVA2 160 aa5.96□□□□□ -1.46
NPRL3-201ENST00000399953 KRTAP19-5Q3LI72 72 aa5.92□□□□□ -1.46
NPRL3-201ENST00000399953 KRTAP9-3Q9BYQ3 159 aa5.69□□□□□ -1.5
NPRL3-201ENST00000399953 LCE2BO14633 110 aa5.63□□□□□ -1.51
NPRL3-201ENST00000399953 KRTAP4-7Q9BYR0 210 aa5.6□□□□□ -1.51
NPRL3-201ENST00000399953 KRTAP19-4Q3LI73 84 aa5.54□□□□□ -1.52
NPRL3-201ENST00000399953 KRTAP12-4P60329 112 aa5.53□□□□□ -1.52
NPRL3-201ENST00000399953 KRTAP4-8A0A0G2JLE6 195 aa5.52□□□□□ -1.53
NPRL3-201ENST00000399953 KRTAP4-8Q9BYQ9 185 aa5.52□□□□□ -1.53
NPRL3-201ENST00000399953 SSPOA2VEC9 5147 aa5.48□□□□□ -1.53
NPRL3-201ENST00000399953 KRTAP19-7Q3SYF9 63 aa5.46□□□□□ -1.54
NPRL3-201ENST00000399953 LCE2AQ5TA79 106 aaPredicted RBP5.44□□□□□ -1.54
NPRL3-201ENST00000399953 MT1LQ93083 61 aa5.37□□□□□ -1.55
NPRL3-201ENST00000399953 DSTQ03001 7570 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms