RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 FAT3Q8TDW7 4589 aa6.01□□□□□ -1.45
C4orf3-201ENST00000399075 LUZP6Q538Z0 58 aa5.98□□□□□ -1.45
C4orf3-201ENST00000399075 TNXBP22105 4242 aa5.97□□□□□ -1.45
C4orf3-201ENST00000399075 DMBT1Q9UGM3 2413 aaPredicted RBP5.96□□□□□ -1.46
C4orf3-201ENST00000399075 H0YAA0 97 aa5.95□□□□□ -1.46
C4orf3-201ENST00000399075 Q5VSD8 79 aa5.95□□□□□ -1.46
C4orf3-201ENST00000399075 A0A1B0GU33 70 aa5.94□□□□□ -1.46
C4orf3-201ENST00000399075 RYR3Q15413 4870 aa5.94□□□□□ -1.46
C4orf3-201ENST00000399075 RPL37P61927 97 aaKnown RBP5.94□□□□□ -1.46
C4orf3-201ENST00000399075 H1FX-AS1Q4G0G2 97 aa5.94□□□□□ -1.46
C4orf3-201ENST00000399075 LRP1Q07954 4544 aaKnown RBP5.91□□□□□ -1.46
C4orf3-201ENST00000399075 HSPG2P98160 4391 aa5.91□□□□□ -1.46
C4orf3-201ENST00000399075 XP32Q5T750 250 aa5.89□□□□□ -1.47
C4orf3-201ENST00000399075 RYR1P21817 5038 aa5.88□□□□□ -1.47
C4orf3-201ENST00000399075 KRTAP15-1Q3LI76 137 aa5.85□□□□□ -1.47
C4orf3-201ENST00000399075 K7ERS5 55 aa5.84□□□□□ -1.48
C4orf3-201ENST00000399075 KRTAP3-3Q9BYR6 98 aa5.83□□□□□ -1.48
C4orf3-201ENST00000399075 C10orf95Q9H7T3 257 aa5.82□□□□□ -1.48
C4orf3-201ENST00000399075 MT1HL1P0DM35 61 aa5.81□□□□□ -1.48
C4orf3-201ENST00000399075 TPRXLQ17RH7 258 aa5.79□□□□□ -1.48
C4orf3-201ENST00000399075 KRTAP17-1Q9BYP8 105 aa5.79□□□□□ -1.48
C4orf3-201ENST00000399075 S4R3F8 94 aa5.79□□□□□ -1.48
C4orf3-201ENST00000399075 KRTAP10-6P60371 365 aaPredicted RBP5.78□□□□□ -1.48
C4orf3-201ENST00000399075 SEC61BP60468 96 aaKnown RBP5.78□□□□□ -1.48
C4orf3-201ENST00000399075 KRTAP3-2Q9BYR7 98 aa5.75□□□□□ -1.49
C4orf3-201ENST00000399075 MYCBP2O75592 4640 aa5.73□□□□□ -1.49
C4orf3-201ENST00000399075 KIAA1109Q2LD37 5005 aa5.72□□□□□ -1.49
C4orf3-201ENST00000399075 EPPK1P58107 5090 aaKnown RBP5.7□□□□□ -1.5
C4orf3-201ENST00000399075 KRTAP13-4Q3LI77 160 aa5.68□□□□□ -1.5
C4orf3-201ENST00000399075 A0A0D9SG42 100 aa5.6□□□□□ -1.51
C4orf3-201ENST00000399075 LRP2P98164 4655 aa5.58□□□□□ -1.52
C4orf3-201ENST00000399075 J3QL48 77 aa5.58□□□□□ -1.52
C4orf3-201ENST00000399075 LPAP08519 4548 aa5.55□□□□□ -1.52
C4orf3-201ENST00000399075 M0QZ58 72 aa5.53□□□□□ -1.52
C4orf3-201ENST00000399075 KRTAP12-2P59991 146 aa5.5□□□□□ -1.53
C4orf3-201ENST00000399075 KRTAP12-1P59990 96 aa5.49□□□□□ -1.53
C4orf3-201ENST00000399075 KRTAP4-5Q9BYR2 181 aa5.49□□□□□ -1.53
C4orf3-201ENST00000399075 ABCA13Q86UQ4 5058 aa5.47□□□□□ -1.53
C4orf3-201ENST00000399075 HERC2O95714 4834 aa5.41□□□□□ -1.54
C4orf3-201ENST00000399075 MUC17Q685J3 4493 aa5.41□□□□□ -1.54
C4orf3-201ENST00000399075 BIRC6Q9NR09 4857 aa5.41□□□□□ -1.54
C4orf3-201ENST00000399075 KRTAP4-1Q9BYQ7 146 aa5.36□□□□□ -1.55
C4orf3-201ENST00000399075 R4GN34 69 aa5.35□□□□□ -1.55
C4orf3-201ENST00000399075 KRTAP19-2Q3LHN2 52 aa5.32□□□□□ -1.56
C4orf3-201ENST00000399075 PLAC4Q8WY50 150 aa5.28□□□□□ -1.56
C4orf3-201ENST00000399075 CAMK2N1Q7Z7J9 78 aa5.27□□□□□ -1.57
C4orf3-201ENST00000399075 LORP23490 312 aaPredicted RBP5.25□□□□□ -1.57
C4orf3-201ENST00000399075 PCLOQ9Y6V0 5065 aa5.17□□□□□ -1.58
C4orf3-201ENST00000399075 FLGP20930 4061 aaPredicted RBP5.14□□□□□ -1.59
C4orf3-201ENST00000399075 HERC1Q15751 4861 aa5.08□□□□□ -1.6
C4orf3-201ENST00000399075 HMCN2Q8NDA2 5059 aa5.06□□□□□ -1.6
C4orf3-201ENST00000399075 PP632Q6XCG6 107 aa5.04□□□□□ -1.6
C4orf3-201ENST00000399075 MUC2Q02817 5179 aa5.03□□□□□ -1.61
C4orf3-201ENST00000399075 LCE2CQ5TA81 110 aa4.99□□□□□ -1.61
C4orf3-201ENST00000399075 PRO2289Q9P1D8 64 aa4.99□□□□□ -1.61
C4orf3-201ENST00000399075 KRTAP23-1A1A580 65 aa4.93□□□□□ -1.62
C4orf3-201ENST00000399075 SPRR2GQ9BYE4 73 aa4.92□□□□□ -1.62
C4orf3-201ENST00000399075 TNP1P09430 55 aa4.91□□□□□ -1.62
C4orf3-201ENST00000399075 KRTAP19-1Q8IUB9 90 aa4.86□□□□□ -1.63
C4orf3-201ENST00000399075 MT1HP80294 61 aa4.85□□□□□ -1.63
C4orf3-201ENST00000399075 FAT4Q6V0I7 4981 aa4.83□□□□□ -1.64
C4orf3-201ENST00000399075 M0R2T5 61 aa4.82□□□□□ -1.64
C4orf3-201ENST00000399075 RNF213Q63HN8 5207 aa4.8□□□□□ -1.64
C4orf3-201ENST00000399075 UBR4Q5T4S7 5183 aa4.79□□□□□ -1.64
C4orf3-201ENST00000399075 MT2AP02795 61 aa4.77□□□□□ -1.65
C4orf3-201ENST00000399075 LCE2DQ5TA82 110 aaPredicted RBP4.77□□□□□ -1.65
C4orf3-201ENST00000399075 MT1FP04733 61 aa4.76□□□□□ -1.65
C4orf3-201ENST00000399075 KRTAP9-8Q9BYQ0 159 aa4.74□□□□□ -1.65
C4orf3-201ENST00000399075 KRTAP10-10P60014 251 aa4.74□□□□□ -1.65
C4orf3-201ENST00000399075 KRTAP19-8Q3LI54 63 aa4.72□□□□□ -1.65
C4orf3-201ENST00000399075 SPRR5A0A1B0GTR4 108 aa4.69□□□□□ -1.66
C4orf3-201ENST00000399075 INE1O15225 51 aa4.66□□□□□ -1.66
C4orf3-201ENST00000399075 LCE3AQ5TA76 89 aa4.62□□□□□ -1.67
C4orf3-201ENST00000399075 MT1BP07438 61 aa4.62□□□□□ -1.67
C4orf3-201ENST00000399075 KRTAP10-5P60370 271 aa4.58□□□□□ -1.68
C4orf3-201ENST00000399075 MT1XP80297 61 aa4.58□□□□□ -1.68
C4orf3-201ENST00000399075 KRTAP8-1Q8IUC2 63 aa4.57□□□□□ -1.68
C4orf3-201ENST00000399075 KRTAP9-3Q9BYQ3 159 aa4.56□□□□□ -1.68
C4orf3-201ENST00000399075 KRTAP10-12P60413 245 aa4.48□□□□□ -1.69
C4orf3-201ENST00000399075 KRTAP12-3P60328 96 aa4.43□□□□□ -1.7
C4orf3-201ENST00000399075 KRTAP10-7P60409 375 aaPredicted RBP4.41□□□□□ -1.7
C4orf3-201ENST00000399075 LCE2AQ5TA79 106 aaPredicted RBP4.41□□□□□ -1.7
C4orf3-201ENST00000399075 LCE2BO14633 110 aa4.35□□□□□ -1.71
C4orf3-201ENST00000399075 KRTAP19-5Q3LI72 72 aa4.23□□□□□ -1.73
C4orf3-201ENST00000399075 LCE3CQ5T5A8 94 aa4.17□□□□□ -1.74
C4orf3-201ENST00000399075 USH2AO75445 5202 aa4.13□□□□□ -1.75
C4orf3-201ENST00000399075 KRTAP4-8A0A0G2JLE6 195 aa4.11□□□□□ -1.75
C4orf3-201ENST00000399075 KRTAP4-8Q9BYQ9 185 aa4.11□□□□□ -1.75
C4orf3-201ENST00000399075 KRTAP19-4Q3LI73 84 aa4.08□□□□□ -1.76
C4orf3-201ENST00000399075 KRTAP19-7Q3SYF9 63 aa4.08□□□□□ -1.76
C4orf3-201ENST00000399075 KMT2DO14686 5537 aa4.04□□□□□ -1.76
C4orf3-201ENST00000399075 SSPOA2VEC9 5147 aa4□□□□□ -1.77
C4orf3-201ENST00000399075 KRTAP9-6A8MVA2 160 aa3.98□□□□□ -1.77
C4orf3-201ENST00000399075 MT1EP04732 61 aa3.97□□□□□ -1.77
C4orf3-201ENST00000399075 KRTAP19-6Q3LI70 58 aa3.96□□□□□ -1.77
C4orf3-201ENST00000399075 MT1LQ93083 61 aa3.96□□□□□ -1.77
C4orf3-201ENST00000399075 KRTAP4-7Q9BYR0 210 aa3.9□□□□□ -1.78
C4orf3-201ENST00000399075 KRTAP2-3P0C7H8 128 aa3.89□□□□□ -1.79
C4orf3-201ENST00000399075 KRTAP2-4Q9BYR9 128 aa3.89□□□□□ -1.79
C4orf3-201ENST00000399075 KRTAP2-1Q9BYU5 128 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms