RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 ALMS1Q8TCU4 4167 aa4.12□□□□□ -1.75
ATL3-201ENST00000398868 DNAH9Q9NYC9 4486 aa4.1□□□□□ -1.75
ATL3-201ENST00000398868 LYSTQ99698 3801 aa4.09□□□□□ -1.75
ATL3-201ENST00000398868 KRTAP3-2Q9BYR7 98 aa4.09□□□□□ -1.76
ATL3-201ENST00000398868 KRTAP3-3Q9BYR6 98 aa4.07□□□□□ -1.76
ATL3-201ENST00000398868 ANK2Q01484 3957 aa4.07□□□□□ -1.76
ATL3-201ENST00000398868 LCE3AQ5TA76 89 aa4.06□□□□□ -1.76
ATL3-201ENST00000398868 DNAH1Q9P2D7 4330 aa4.06□□□□□ -1.76
ATL3-201ENST00000398868 VPS13BQ7Z7G8 4022 aa4.06□□□□□ -1.76
ATL3-201ENST00000398868 KRTAP10-5P60370 271 aa4.05□□□□□ -1.76
ATL3-201ENST00000398868 KRTAP8-1Q8IUC2 63 aa4.02□□□□□ -1.77
ATL3-201ENST00000398868 KRTAP12-3P60328 96 aa4.01□□□□□ -1.77
ATL3-201ENST00000398868 DNAH2Q9P225 4427 aa4□□□□□ -1.77
ATL3-201ENST00000398868 CMYA5Q8N3K9 4069 aa4□□□□□ -1.77
ATL3-201ENST00000398868 KRTAP10-4P60372 401 aaPredicted RBP3.95□□□□□ -1.78
ATL3-201ENST00000398868 PLECQ15149 4684 aaKnown RBP3.92□□□□□ -1.78
ATL3-201ENST00000398868 PRKDCP78527 4128 aaKnown RBP3.92□□□□□ -1.78
ATL3-201ENST00000398868 KRTAP4-1Q9BYQ7 146 aa3.89□□□□□ -1.79
ATL3-201ENST00000398868 DNAH3Q8TD57 4116 aa3.88□□□□□ -1.79
ATL3-201ENST00000398868 DNAH11Q96DT5 4516 aa3.87□□□□□ -1.79
ATL3-201ENST00000398868 DNAH5Q8TE73 4624 aa3.87□□□□□ -1.79
ATL3-201ENST00000398868 STARD9Q9P2P6 4700 aa3.86□□□□□ -1.79
ATL3-201ENST00000398868 SPRR2FQ96RM1 72 aa3.85□□□□□ -1.79
ATL3-201ENST00000398868 DNAH6Q9C0G6 4158 aa3.85□□□□□ -1.79
ATL3-201ENST00000398868 DNAH7Q8WXX0 4024 aa3.84□□□□□ -1.79
ATL3-201ENST00000398868 FAT2Q9NYQ8 4349 aa3.84□□□□□ -1.8
ATL3-201ENST00000398868 DNAH8Q96JB1 4490 aa3.83□□□□□ -1.8
ATL3-201ENST00000398868 MT1HP80294 61 aa3.82□□□□□ -1.8
ATL3-201ENST00000398868 DNAH17Q9UFH2 4485 aa3.79□□□□□ -1.8
ATL3-201ENST00000398868 FAT1Q14517 4588 aa3.77□□□□□ -1.81
ATL3-201ENST00000398868 LRP1BQ9NZR2 4599 aa3.77□□□□□ -1.81
ATL3-201ENST00000398868 VPS13DQ5THJ4 4388 aa3.76□□□□□ -1.81
ATL3-201ENST00000398868 DNHD1Q96M86 4753 aa3.72□□□□□ -1.81
ATL3-201ENST00000398868 KRTAP23-1A1A580 65 aa3.71□□□□□ -1.82
ATL3-201ENST00000398868 FAT3Q8TDW7 4589 aa3.7□□□□□ -1.82
ATL3-201ENST00000398868 MT2AP02795 61 aa3.68□□□□□ -1.82
ATL3-201ENST00000398868 MT1FP04733 61 aa3.67□□□□□ -1.82
ATL3-201ENST00000398868 SACSQ9NZJ4 4579 aa3.66□□□□□ -1.82
ATL3-201ENST00000398868 KRTAP10-7P60409 375 aaPredicted RBP3.66□□□□□ -1.82
ATL3-201ENST00000398868 KRTAP19-5Q3LI72 72 aa3.66□□□□□ -1.82
ATL3-201ENST00000398868 LPAP08519 4548 aa3.65□□□□□ -1.83
ATL3-201ENST00000398868 SPRR2EP22531 72 aa3.65□□□□□ -1.83
ATL3-201ENST00000398868 SPRR2BP35325 72 aa3.65□□□□□ -1.83
ATL3-201ENST00000398868 SPRR2AP35326 72 aa3.65□□□□□ -1.83
ATL3-201ENST00000398868 HECTD4Q9Y4D8 3996 aa3.64□□□□□ -1.83
ATL3-201ENST00000398868 DYNC2H1Q8NCM8 4307 aaKnown RBP3.64□□□□□ -1.83
ATL3-201ENST00000398868 APOBP04114 4563 aaKnown RBP3.58□□□□□ -1.84
ATL3-201ENST00000398868 MYCBP2O75592 4640 aa3.58□□□□□ -1.84
ATL3-201ENST00000398868 PKHD1P08F94 4074 aa3.57□□□□□ -1.84
ATL3-201ENST00000398868 DYNC1H1Q14204 4646 aaKnown RBP3.56□□□□□ -1.84
ATL3-201ENST00000398868 KRTAP17-1Q9BYP8 105 aa3.56□□□□□ -1.84
ATL3-201ENST00000398868 LCE3BQ5TA77 95 aa3.55□□□□□ -1.84
ATL3-201ENST00000398868 RYR1P21817 5038 aa3.54□□□□□ -1.84
ATL3-201ENST00000398868 LRP1Q07954 4544 aaKnown RBP3.52□□□□□ -1.85
ATL3-201ENST00000398868 SPRR2DP22532 72 aa3.49□□□□□ -1.85
ATL3-201ENST00000398868 LCE3CQ5T5A8 94 aa3.49□□□□□ -1.85
ATL3-201ENST00000398868 MT1GP13640 62 aa3.47□□□□□ -1.85
ATL3-201ENST00000398868 HSPG2P98160 4391 aa3.46□□□□□ -1.86
ATL3-201ENST00000398868 KRTAP4-8A0A0G2JLE6 195 aa3.45□□□□□ -1.86
ATL3-201ENST00000398868 KRTAP4-8Q9BYQ9 185 aa3.45□□□□□ -1.86
ATL3-201ENST00000398868 SPRR2GQ9BYE4 73 aa3.44□□□□□ -1.86
ATL3-201ENST00000398868 PKD1P98161 4303 aa3.4□□□□□ -1.86
ATL3-201ENST00000398868 LCE2BO14633 110 aa3.39□□□□□ -1.87
ATL3-201ENST00000398868 KRTAP12-4P60329 112 aa3.38□□□□□ -1.87
ATL3-201ENST00000398868 KRTAP19-1Q8IUB9 90 aa3.34□□□□□ -1.87
ATL3-201ENST00000398868 MT4P47944 62 aa3.31□□□□□ -1.88
ATL3-201ENST00000398868 RYR3Q15413 4870 aa3.29□□□□□ -1.88
ATL3-201ENST00000398868 HYDINQ4G0P3 5121 aa3.29□□□□□ -1.88
ATL3-201ENST00000398868 PKHD1L1Q86WI1 4243 aa3.28□□□□□ -1.88
ATL3-201ENST00000398868 BIRC6Q9NR09 4857 aa3.28□□□□□ -1.88
ATL3-201ENST00000398868 TNXBP22105 4242 aa3.27□□□□□ -1.89
ATL3-201ENST00000398868 KRTAP4-7Q9BYR0 210 aa3.27□□□□□ -1.89
ATL3-201ENST00000398868 LRP2P98164 4655 aa3.27□□□□□ -1.89
ATL3-201ENST00000398868 SPRR5A0A1B0GTR4 108 aa3.26□□□□□ -1.89
ATL3-201ENST00000398868 MT1XP80297 61 aa3.26□□□□□ -1.89
ATL3-201ENST00000398868 LCE2CQ5TA81 110 aa3.22□□□□□ -1.89
ATL3-201ENST00000398868 LCE2DQ5TA82 110 aaPredicted RBP3.21□□□□□ -1.9
ATL3-201ENST00000398868 KRTAP9-8Q9BYQ0 159 aa3.21□□□□□ -1.9
ATL3-201ENST00000398868 MT1BP07438 61 aa3.18□□□□□ -1.9
ATL3-201ENST00000398868 FLGP20930 4061 aaPredicted RBP3.17□□□□□ -1.9
ATL3-201ENST00000398868 FSIP2Q5CZC0 6907 aa3.16□□□□□ -1.9
ATL3-201ENST00000398868 KRTAP9-2Q9BYQ4 174 aa3.15□□□□□ -1.9
ATL3-201ENST00000398868 SYNE2Q8WXH0 6885 aaKnown RBP3.15□□□□□ -1.9
ATL3-201ENST00000398868 LOC100996750A0A140TA64 210 aa3.14□□□□□ -1.91
ATL3-201ENST00000398868 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
ATL3-201ENST00000398868 KRTAP9-3Q9BYQ3 159 aa3.11□□□□□ -1.91
ATL3-201ENST00000398868 KRTAP4-3Q9BYR4 195 aa3.11□□□□□ -1.91
ATL3-201ENST00000398868 KRTAP19-8Q3LI54 63 aa3.09□□□□□ -1.91
ATL3-201ENST00000398868 LCE1BQ5T7P3 118 aa3.09□□□□□ -1.91
ATL3-201ENST00000398868 KRTAP19-4Q3LI73 84 aa3.08□□□□□ -1.92
ATL3-201ENST00000398868 PRM1P04553 51 aa3.06□□□□□ -1.92
ATL3-201ENST00000398868 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
ATL3-201ENST00000398868 LCE1DQ5T752 114 aa3.05□□□□□ -1.92
ATL3-201ENST00000398868 PCLOQ9Y6V0 5065 aa3.04□□□□□ -1.92
ATL3-201ENST00000398868 KIAA1109Q2LD37 5005 aa3.03□□□□□ -1.93
ATL3-201ENST00000398868 KMT2CQ8NEZ4 4911 aaKnown RBP3.02□□□□□ -1.93
ATL3-201ENST00000398868 HERC2O95714 4834 aa3.01□□□□□ -1.93
ATL3-201ENST00000398868 KRTAP19-3Q7Z4W3 81 aa3□□□□□ -1.93
ATL3-201ENST00000398868 KRTAP9-6A0A140TA67 174 aa2.99□□□□□ -1.93
ATL3-201ENST00000398868 KRTAP4-9Q9BYQ8 210 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms