RNA–Protein interactions for RNA: ENST00000398411.5

CST3-203, Transcript of cystatin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CST3, Length 3,286 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CST3-203ENST00000398411 PKD1P98161 4303 aa6.72□□□□□ -1.33
CST3-203ENST00000398411 C20orf166-AS1Q96NR2 134 aa6.71□□□□□ -1.33
CST3-203ENST00000398411 FAT3Q8TDW7 4589 aa6.7□□□□□ -1.34
CST3-203ENST00000398411 KRTAP10-8P60410 259 aa6.65□□□□□ -1.35
CST3-203ENST00000398411 S4R3F8 94 aa6.63□□□□□ -1.35
CST3-203ENST00000398411 KRTAP10-6P60371 365 aaPredicted RBP6.61□□□□□ -1.35
CST3-203ENST00000398411 APOBP04114 4563 aaKnown RBP6.6□□□□□ -1.35
CST3-203ENST00000398411 HSPG2P98160 4391 aa6.6□□□□□ -1.35
CST3-203ENST00000398411 SACSQ9NZJ4 4579 aa6.58□□□□□ -1.36
CST3-203ENST00000398411 A0A1B0GVY2 172 aa6.57□□□□□ -1.36
CST3-203ENST00000398411 KRTAP12-2P59991 146 aa6.57□□□□□ -1.36
CST3-203ENST00000398411 KRTAP3-3Q9BYR6 98 aa6.54□□□□□ -1.36
CST3-203ENST00000398411 RPS29P62273 56 aaKnown RBP6.51□□□□□ -1.37
CST3-203ENST00000398411 KRTAP3-2Q9BYR7 98 aa6.51□□□□□ -1.37
CST3-203ENST00000398411 LPAP08519 4548 aa6.51□□□□□ -1.37
CST3-203ENST00000398411 RYR2Q92736 4967 aa6.45□□□□□ -1.38
CST3-203ENST00000398411 XP32Q5T750 250 aa6.45□□□□□ -1.38
CST3-203ENST00000398411 KRTAP10-4P60372 401 aaPredicted RBP6.44□□□□□ -1.38
CST3-203ENST00000398411 LRP2P98164 4655 aa6.44□□□□□ -1.38
CST3-203ENST00000398411 KMT2CQ8NEZ4 4911 aaKnown RBP6.44□□□□□ -1.38
CST3-203ENST00000398411 KRTAP15-1Q3LI76 137 aa6.43□□□□□ -1.38
CST3-203ENST00000398411 Q5VSD8 79 aa6.42□□□□□ -1.38
CST3-203ENST00000398411 M0QZ58 72 aa6.4□□□□□ -1.39
CST3-203ENST00000398411 PKHD1L1Q86WI1 4243 aa6.39□□□□□ -1.39
CST3-203ENST00000398411 KRTAP12-1P59990 96 aa6.38□□□□□ -1.39
CST3-203ENST00000398411 KIAA1109Q2LD37 5005 aa6.35□□□□□ -1.39
CST3-203ENST00000398411 R4GN34 69 aa6.34□□□□□ -1.39
CST3-203ENST00000398411 RYR1P21817 5038 aa6.33□□□□□ -1.4
CST3-203ENST00000398411 RYR3Q15413 4870 aa6.2□□□□□ -1.42
CST3-203ENST00000398411 CAMK2N1Q7Z7J9 78 aa6.17□□□□□ -1.42
CST3-203ENST00000398411 TNXBP22105 4242 aa6.17□□□□□ -1.42
CST3-203ENST00000398411 MUC2Q02817 5179 aa6.16□□□□□ -1.42
CST3-203ENST00000398411 KRTAP17-1Q9BYP8 105 aa6.16□□□□□ -1.42
CST3-203ENST00000398411 LORP23490 312 aaPredicted RBP6.16□□□□□ -1.42
CST3-203ENST00000398411 A0A0A0MQY5 61 aa6.15□□□□□ -1.42
CST3-203ENST00000398411 ABCA13Q86UQ4 5058 aa6.14□□□□□ -1.43
CST3-203ENST00000398411 PLAC4Q8WY50 150 aa6.14□□□□□ -1.43
CST3-203ENST00000398411 EPPK1P58107 5090 aaKnown RBP6.12□□□□□ -1.43
CST3-203ENST00000398411 LUZP6Q538Z0 58 aa6.1□□□□□ -1.43
CST3-203ENST00000398411 MT1HL1P0DM35 61 aa6.03□□□□□ -1.44
CST3-203ENST00000398411 KRTAP4-5Q9BYR2 181 aa5.94□□□□□ -1.46
CST3-203ENST00000398411 J3QL48 77 aa5.91□□□□□ -1.46
CST3-203ENST00000398411 KRTAP4-1Q9BYQ7 146 aa5.85□□□□□ -1.47
CST3-203ENST00000398411 SEC61BP60468 96 aaKnown RBP5.84□□□□□ -1.47
CST3-203ENST00000398411 FAT4Q6V0I7 4981 aa5.83□□□□□ -1.48
CST3-203ENST00000398411 TNP1P09430 55 aa5.71□□□□□ -1.5
CST3-203ENST00000398411 M0R2T5 61 aa5.68□□□□□ -1.5
CST3-203ENST00000398411 HERC2O95714 4834 aa5.68□□□□□ -1.5
CST3-203ENST00000398411 RNF213Q63HN8 5207 aa5.67□□□□□ -1.5
CST3-203ENST00000398411 BIRC6Q9NR09 4857 aa5.65□□□□□ -1.5
CST3-203ENST00000398411 PP632Q6XCG6 107 aa5.65□□□□□ -1.51
CST3-203ENST00000398411 MUC17Q685J3 4493 aa5.64□□□□□ -1.51
CST3-203ENST00000398411 PCLOQ9Y6V0 5065 aa5.63□□□□□ -1.51
CST3-203ENST00000398411 HERC1Q15751 4861 aa5.61□□□□□ -1.51
CST3-203ENST00000398411 HMCN2Q8NDA2 5059 aa5.52□□□□□ -1.53
CST3-203ENST00000398411 KRTAP19-2Q3LHN2 52 aa5.44□□□□□ -1.54
CST3-203ENST00000398411 LCE3AQ5TA76 89 aa5.42□□□□□ -1.54
CST3-203ENST00000398411 LCE2DQ5TA82 110 aaPredicted RBP5.4□□□□□ -1.55
CST3-203ENST00000398411 FLGP20930 4061 aaPredicted RBP5.39□□□□□ -1.55
CST3-203ENST00000398411 KRTAP10-10P60014 251 aa5.38□□□□□ -1.55
CST3-203ENST00000398411 UBR4Q5T4S7 5183 aa5.37□□□□□ -1.55
CST3-203ENST00000398411 SPRR5A0A1B0GTR4 108 aa5.28□□□□□ -1.56
CST3-203ENST00000398411 KMT2DO14686 5537 aa5.23□□□□□ -1.57
CST3-203ENST00000398411 USH2AO75445 5202 aa5.23□□□□□ -1.57
CST3-203ENST00000398411 KRTAP19-1Q8IUB9 90 aa5.22□□□□□ -1.57
CST3-203ENST00000398411 LCE2CQ5TA81 110 aa5.18□□□□□ -1.58
CST3-203ENST00000398411 MT1FP04733 61 aa5.14□□□□□ -1.59
CST3-203ENST00000398411 PRO2289Q9P1D8 64 aa5.14□□□□□ -1.59
CST3-203ENST00000398411 SPRR2GQ9BYE4 73 aa5.11□□□□□ -1.59
CST3-203ENST00000398411 KRTAP12-3P60328 96 aa5.1□□□□□ -1.59
CST3-203ENST00000398411 MT2AP02795 61 aa5.07□□□□□ -1.6
CST3-203ENST00000398411 MT1HP80294 61 aa5.07□□□□□ -1.6
CST3-203ENST00000398411 KRTAP23-1A1A580 65 aa5.06□□□□□ -1.6
CST3-203ENST00000398411 KRTAP10-12P60413 245 aa5.06□□□□□ -1.6
CST3-203ENST00000398411 FSIP2Q5CZC0 6907 aa5.06□□□□□ -1.6
CST3-203ENST00000398411 KRTAP10-7P60409 375 aaPredicted RBP5.01□□□□□ -1.61
CST3-203ENST00000398411 KRTAP8-1Q8IUC2 63 aa4.95□□□□□ -1.62
CST3-203ENST00000398411 KRTAP10-5P60370 271 aa4.95□□□□□ -1.62
CST3-203ENST00000398411 MT1XP80297 61 aa4.95□□□□□ -1.62
CST3-203ENST00000398411 INE1O15225 51 aa4.93□□□□□ -1.62
CST3-203ENST00000398411 KRTAP9-8Q9BYQ0 159 aa4.91□□□□□ -1.62
CST3-203ENST00000398411 MT1BP07438 61 aa4.9□□□□□ -1.62
CST3-203ENST00000398411 KRTAP19-5Q3LI72 72 aa4.83□□□□□ -1.64
CST3-203ENST00000398411 KRTAP4-8A0A0G2JLE6 195 aa4.82□□□□□ -1.64
CST3-203ENST00000398411 KRTAP4-8Q9BYQ9 185 aa4.82□□□□□ -1.64
CST3-203ENST00000398411 KRTAP19-8Q3LI54 63 aa4.81□□□□□ -1.64
CST3-203ENST00000398411 OBSCNQ5VST9 7968 aa4.81□□□□□ -1.64
CST3-203ENST00000398411 KRTAP4-7Q9BYR0 210 aa4.79□□□□□ -1.64
CST3-203ENST00000398411 DSTQ03001 7570 aaKnown RBP4.78□□□□□ -1.64
CST3-203ENST00000398411 KRTAP9-3Q9BYQ3 159 aa4.72□□□□□ -1.65
CST3-203ENST00000398411 LCE3CQ5T5A8 94 aa4.7□□□□□ -1.66
CST3-203ENST00000398411 FCGBPQ9Y6R7 5405 aaPredicted RBP4.69□□□□□ -1.66
CST3-203ENST00000398411 KRTAP9-6A8MVA2 160 aa4.68□□□□□ -1.66
CST3-203ENST00000398411 SYNE1Q8NF91 8797 aaKnown RBP4.68□□□□□ -1.66
CST3-203ENST00000398411 LCE2AQ5TA79 106 aaPredicted RBP4.67□□□□□ -1.66
CST3-203ENST00000398411 CRCT1Q9UGL9 99 aa4.67□□□□□ -1.66
CST3-203ENST00000398411 LCE2BO14633 110 aa4.59□□□□□ -1.67
CST3-203ENST00000398411 MUC12Q9UKN1 5478 aa4.53□□□□□ -1.68
CST3-203ENST00000398411 LOC100996750A0A140TA64 210 aa4.44□□□□□ -1.7
CST3-203ENST00000398411 KRTAP4-6Q9BYQ5 205 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms