RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 TENM2Q9NT68 2774 aa0.01□□□□□ -2.41
HMGN2P39-201ENST00000398005 MUC2Q02817 5179 aa0.01□□□□□ -2.41
HMGN2P39-201ENST00000398005 DNAH6Q9C0G6 4158 aa0.01□□□□□ -2.41
HMGN2P39-201ENST00000398005 NBPF19A0A087WUL8 3843 aa0.01□□□□□ -2.41
HMGN2P39-201ENST00000398005 FLNAP21333 2647 aaKnown RBP0.01□□□□□ -2.41
HMGN2P39-201ENST00000398005 MAP1AP78559 2803 aaPredicted RBP0.01□□□□□ -2.41
HMGN2P39-201ENST00000398005 ACACAQ13085 2346 aa0.01□□□□□ -2.41
HMGN2P39-201ENST00000398005 HIVEP1P15822 2718 aa0□□□□□ -2.41
HMGN2P39-201ENST00000398005 UTP20O75691 2785 aaKnown RBP0□□□□□ -2.41
HMGN2P39-201ENST00000398005 KRTAP6-1Q3LI64 71 aa0□□□□□ -2.41
HMGN2P39-201ENST00000398005 NBEAL2Q6ZNJ1 2754 aa0□□□□□ -2.41
HMGN2P39-201ENST00000398005 DEFB104AQ8WTQ1 72 aa0□□□□□ -2.41
HMGN2P39-201ENST00000398005 ARHGAP5-AS1Q96IT6 56 aa0□□□□□ -2.41
HMGN2P39-201ENST00000398005 SPG11Q96JI7 2443 aa0□□□□□ -2.41
HMGN2P39-201ENST00000398005 FAT3Q8TDW7 4589 aa-0□□□□□ -2.41
HMGN2P39-201ENST00000398005 CELSR3Q9NYQ7 3312 aa-0□□□□□ -2.41
HMGN2P39-201ENST00000398005 NBEAQ8NFP9 2946 aa-0□□□□□ -2.41
HMGN2P39-201ENST00000398005 DNAH11Q96DT5 4516 aa-0.01□□□□□ -2.41
HMGN2P39-201ENST00000398005 KRTAP19-8Q3LI54 63 aa-0.01□□□□□ -2.41
HMGN2P39-201ENST00000398005 LAMA1P25391 3075 aa-0.01□□□□□ -2.41
HMGN2P39-201ENST00000398005 SPTBN5Q9NRC6 3674 aaKnown RBP-0.01□□□□□ -2.41
HMGN2P39-201ENST00000398005 APOBP04114 4563 aaKnown RBP-0.02□□□□□ -2.41
HMGN2P39-201ENST00000398005 MT1HP80294 61 aa-0.02□□□□□ -2.41
HMGN2P39-201ENST00000398005 LRRK2Q5S007 2527 aa-0.02□□□□□ -2.41
HMGN2P39-201ENST00000398005 FRYQ5TBA9 3013 aa-0.02□□□□□ -2.41
HMGN2P39-201ENST00000398005 DNAH7Q8WXX0 4024 aa-0.02□□□□□ -2.41
HMGN2P39-201ENST00000398005 DNAH9Q9NYC9 4486 aa-0.02□□□□□ -2.41
HMGN2P39-201ENST00000398005 DNAH2Q9P225 4427 aa-0.02□□□□□ -2.41
HMGN2P39-201ENST00000398005 TEP1Q99973 2627 aaKnown RBP-0.02□□□□□ -2.41
HMGN2P39-201ENST00000398005 COL12A1Q99715 3063 aa-0.02□□□□□ -2.41
HMGN2P39-201ENST00000398005 FASNP49327 2511 aaKnown RBP-0.03□□□□□ -2.41
HMGN2P39-201ENST00000398005 NBEAL1Q6ZS30 2694 aa-0.03□□□□□ -2.41
HMGN2P39-201ENST00000398005 MUC12Q9UKN1 5478 aa-0.03□□□□□ -2.42
HMGN2P39-201ENST00000398005 FAT1Q14517 4588 aa-0.04□□□□□ -2.42
HMGN2P39-201ENST00000398005 KRTAP20-1Q3LI63 56 aa-0.04□□□□□ -2.42
HMGN2P39-201ENST00000398005 RHPN1-AS1Q9BWJ2 59 aa-0.04□□□□□ -2.42
HMGN2P39-201ENST00000398005 MXRA5Q9NR99 2828 aa-0.04□□□□□ -2.42
HMGN2P39-201ENST00000398005 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.04□□□□□ -2.42
HMGN2P39-201ENST00000398005 WDR87Q6ZQQ6 2873 aa-0.04□□□□□ -2.42
HMGN2P39-201ENST00000398005 MYO18BQ8IUG5 2567 aa-0.05□□□□□ -2.42
HMGN2P39-201ENST00000398005 ZFHX4Q86UP3 3567 aa-0.05□□□□□ -2.42
HMGN2P39-201ENST00000398005 DEFB136Q30KP8 78 aa-0.05□□□□□ -2.42
HMGN2P39-201ENST00000398005 MGAM2Q2M2H8 2515 aa-0.05□□□□□ -2.42
HMGN2P39-201ENST00000398005 CHD7Q9P2D1 2997 aa-0.05□□□□□ -2.42
HMGN2P39-201ENST00000398005 DNAH1Q9P2D7 4330 aa-0.05□□□□□ -2.42
HMGN2P39-201ENST00000398005 FAM186AA6NE01 2351 aa-0.05□□□□□ -2.42
HMGN2P39-201ENST00000398005 VPS13DQ5THJ4 4388 aa-0.06□□□□□ -2.42
HMGN2P39-201ENST00000398005 TTTY10Q9BZA0 68 aa-0.06□□□□□ -2.42
HMGN2P39-201ENST00000398005 RIF1Q5UIP0 2472 aaKnown RBP-0.07□□□□□ -2.42
HMGN2P39-201ENST00000398005 CCDC168Q8NDH2 2452 aa-0.07□□□□□ -2.42
HMGN2P39-201ENST00000398005 PRCDQ00LT1 54 aa-0.07□□□□□ -2.42
HMGN2P39-201ENST00000398005 STAB2Q8WWQ8 2551 aa-0.07□□□□□ -2.42
HMGN2P39-201ENST00000398005 DOPEY1Q5JWR5 2465 aa-0.08□□□□□ -2.42
HMGN2P39-201ENST00000398005 EPG5Q9HCE0 2579 aa-0.08□□□□□ -2.42
HMGN2P39-201ENST00000398005 MT1EP04732 61 aa-0.08□□□□□ -2.42
HMGN2P39-201ENST00000398005 CRYBG3Q68DQ2 2970 aa-0.09□□□□□ -2.42
HMGN2P39-201ENST00000398005 A0A096LNI7 61 aa-0.09□□□□□ -2.42
HMGN2P39-201ENST00000398005 PCLOQ9Y6V0 5065 aa-0.09□□□□□ -2.42
HMGN2P39-201ENST00000398005 ITPR3Q14573 2671 aa-0.09□□□□□ -2.42
HMGN2P39-201ENST00000398005 TLN2Q9Y4G6 2542 aa-0.09□□□□□ -2.42
HMGN2P39-201ENST00000398005 KMT2CQ8NEZ4 4911 aaKnown RBP-0.09□□□□□ -2.42
HMGN2P39-201ENST00000398005 K7EIM0 57 aa-0.1□□□□□ -2.43
HMGN2P39-201ENST00000398005 ITPR1Q14643 2758 aa-0.1□□□□□ -2.43
HMGN2P39-201ENST00000398005 CMYA5Q8N3K9 4069 aa-0.1□□□□□ -2.43
HMGN2P39-201ENST00000398005 CSMD1Q96PZ7 3565 aa-0.1□□□□□ -2.43
HMGN2P39-201ENST00000398005 RELNP78509 3460 aa-0.11□□□□□ -2.43
HMGN2P39-201ENST00000398005 USP9YO00507 2555 aaPredicted RBP-0.11□□□□□ -2.43
HMGN2P39-201ENST00000398005 H3BSH0 61 aa-0.11□□□□□ -2.43
HMGN2P39-201ENST00000398005 MT1XP80297 61 aa-0.11□□□□□ -2.43
HMGN2P39-201ENST00000398005 MT1LQ93083 61 aa-0.11□□□□□ -2.43
HMGN2P39-201ENST00000398005 DNAH8Q96JB1 4490 aa-0.11□□□□□ -2.43
HMGN2P39-201ENST00000398005 RNF213Q63HN8 5207 aa-0.11□□□□□ -2.43
HMGN2P39-201ENST00000398005 MGAQ8IWI9 3026 aa-0.11□□□□□ -2.43
HMGN2P39-201ENST00000398005 DEFB4AO15263 64 aa-0.12□□□□□ -2.43
HMGN2P39-201ENST00000398005 RYR2Q92736 4967 aa-0.13□□□□□ -2.43
HMGN2P39-201ENST00000398005 ADGRG4Q8IZF6 3080 aa-0.13□□□□□ -2.43
HMGN2P39-201ENST00000398005 HTN1P15515 57 aa-0.13□□□□□ -2.43
HMGN2P39-201ENST00000398005 KRTAP20-2Q3LI61 65 aa-0.13□□□□□ -2.43
HMGN2P39-201ENST00000398005 DEFB133Q30KQ1 61 aa-0.14□□□□□ -2.43
HMGN2P39-201ENST00000398005 USP9XQ93008 2570 aaPredicted RBP-0.15□□□□□ -2.43
HMGN2P39-201ENST00000398005 MT4P47944 62 aa-0.15□□□□□ -2.43
HMGN2P39-201ENST00000398005 HERC1Q15751 4861 aa-0.15□□□□□ -2.43
HMGN2P39-201ENST00000398005 LAMA3Q16787 3333 aa-0.15□□□□□ -2.43
HMGN2P39-201ENST00000398005 STARD9Q9P2P6 4700 aa-0.15□□□□□ -2.43
HMGN2P39-201ENST00000398005 UBR4Q5T4S7 5183 aa-0.16□□□□□ -2.43
HMGN2P39-201ENST00000398005 DNAH10Q8IVF4 4471 aa-0.16□□□□□ -2.43
HMGN2P39-201ENST00000398005 H3BUX3 64 aa-0.16□□□□□ -2.44
HMGN2P39-201ENST00000398005 C5orf42Q9H799 3197 aa-0.16□□□□□ -2.44
HMGN2P39-201ENST00000398005 KIAA1109Q2LD37 5005 aa-0.16□□□□□ -2.44
HMGN2P39-201ENST00000398005 SRCAPQ6ZRS2 3230 aa-0.17□□□□□ -2.44
HMGN2P39-201ENST00000398005 NIPBLQ6KC79 2804 aaeCLIP-0.17□□□□□ -2.44
HMGN2P39-201ENST00000398005 TRRAPQ9Y4A5 3859 aa-0.17□□□□□ -2.44
HMGN2P39-201ENST00000398005 RYR3Q15413 4870 aa-0.17□□□□□ -2.44
HMGN2P39-201ENST00000398005 TMEM167AQ8TBQ9 72 aa-0.17□□□□□ -2.44
HMGN2P39-201ENST00000398005 USH2AO75445 5202 aa-0.17□□□□□ -2.44
HMGN2P39-201ENST00000398005 DMXL2Q8TDJ6 3036 aa-0.17□□□□□ -2.44
HMGN2P39-201ENST00000398005 MUC17Q685J3 4493 aa-0.17□□□□□ -2.44
HMGN2P39-201ENST00000398005 PLECQ15149 4684 aaKnown RBP-0.17□□□□□ -2.44
HMGN2P39-201ENST00000398005 DEFB124Q8NES8 71 aa-0.18□□□□□ -2.44
HMGN2P39-201ENST00000398005 MT1GP13640 62 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms