RNA–Protein interactions for RNA: ENST00000397238.6

AGAP3-202, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-202ENST00000397238 RYR2Q92736 4967 aa10.27□□□□□ -0.77
AGAP3-202ENST00000397238 SPINT4Q6UDR6 99 aa10.27□□□□□ -0.77
AGAP3-202ENST00000397238 C10orf95Q9H7T3 257 aa10.26□□□□□ -0.77
AGAP3-202ENST00000397238 P0C880 135 aa10.25□□□□□ -0.77
AGAP3-202ENST00000397238 KRTAP10-6P60371 365 aaPredicted RBP10.24□□□□□ -0.77
AGAP3-202ENST00000397238 KRTAP10-4P60372 401 aaPredicted RBP10.24□□□□□ -0.77
AGAP3-202ENST00000397238 MYCBP2O75592 4640 aa10.21□□□□□ -0.77
AGAP3-202ENST00000397238 LRP1Q07954 4544 aaKnown RBP10.19□□□□□ -0.78
AGAP3-202ENST00000397238 KRTAP3-3Q9BYR6 98 aa10.19□□□□□ -0.78
AGAP3-202ENST00000397238 TPRXLQ17RH7 258 aa10.19□□□□□ -0.78
AGAP3-202ENST00000397238 PKHD1L1Q86WI1 4243 aa10.15□□□□□ -0.78
AGAP3-202ENST00000397238 KRTAP10-8P60410 259 aa10.15□□□□□ -0.78
AGAP3-202ENST00000397238 HSPG2P98160 4391 aa10.12□□□□□ -0.79
AGAP3-202ENST00000397238 S4R3F8 94 aa10.12□□□□□ -0.79
AGAP3-202ENST00000397238 KRTAP3-2Q9BYR7 98 aa10.11□□□□□ -0.79
AGAP3-202ENST00000397238 Q5VSD8 79 aa10.11□□□□□ -0.79
AGAP3-202ENST00000397238 FAT3Q8TDW7 4589 aa10.02□□□□□ -0.8
AGAP3-202ENST00000397238 RYR3Q15413 4870 aa10.02□□□□□ -0.81
AGAP3-202ENST00000397238 KRTAP12-2P59991 146 aa10.01□□□□□ -0.81
AGAP3-202ENST00000397238 KIAA1109Q2LD37 5005 aa9.99□□□□□ -0.81
AGAP3-202ENST00000397238 KRTAP17-1Q9BYP8 105 aa9.95□□□□□ -0.82
AGAP3-202ENST00000397238 XP32Q5T750 250 aa9.95□□□□□ -0.82
AGAP3-202ENST00000397238 NDUFAF8A1L188 74 aa9.94□□□□□ -0.82
AGAP3-202ENST00000397238 LPAP08519 4548 aa9.85□□□□□ -0.83
AGAP3-202ENST00000397238 RYR1P21817 5038 aa9.84□□□□□ -0.83
AGAP3-202ENST00000397238 TNXBP22105 4242 aa9.83□□□□□ -0.84
AGAP3-202ENST00000397238 KRTAP12-1P59990 96 aa9.83□□□□□ -0.84
AGAP3-202ENST00000397238 KRTAP15-1Q3LI76 137 aa9.77□□□□□ -0.84
AGAP3-202ENST00000397238 EPPK1P58107 5090 aaKnown RBP9.72□□□□□ -0.85
AGAP3-202ENST00000397238 LRP2P98164 4655 aa9.68□□□□□ -0.86
AGAP3-202ENST00000397238 MT1HL1P0DM35 61 aa9.67□□□□□ -0.86
AGAP3-202ENST00000397238 M0QZ58 72 aa9.6□□□□□ -0.87
AGAP3-202ENST00000397238 KRTAP4-5Q9BYR2 181 aa9.6□□□□□ -0.87
AGAP3-202ENST00000397238 R4GN34 69 aa9.52□□□□□ -0.89
AGAP3-202ENST00000397238 A0A0A0MQY5 61 aa9.48□□□□□ -0.89
AGAP3-202ENST00000397238 ABCA13Q86UQ4 5058 aa9.47□□□□□ -0.89
AGAP3-202ENST00000397238 LORP23490 312 aaPredicted RBP9.36□□□□□ -0.91
AGAP3-202ENST00000397238 J3QL48 77 aa9.33□□□□□ -0.92
AGAP3-202ENST00000397238 PLAC4Q8WY50 150 aa9.3□□□□□ -0.92
AGAP3-202ENST00000397238 HERC2O95714 4834 aa9.21□□□□□ -0.93
AGAP3-202ENST00000397238 CAMK2N1Q7Z7J9 78 aa9.15□□□□□ -0.94
AGAP3-202ENST00000397238 SEC61BP60468 96 aaKnown RBP9.08□□□□□ -0.96
AGAP3-202ENST00000397238 LUZP6Q538Z0 58 aa9.04□□□□□ -0.96
AGAP3-202ENST00000397238 KRTAP4-1Q9BYQ7 146 aa9.04□□□□□ -0.96
AGAP3-202ENST00000397238 MUC2Q02817 5179 aa9.03□□□□□ -0.96
AGAP3-202ENST00000397238 MUC17Q685J3 4493 aa8.97□□□□□ -0.97
AGAP3-202ENST00000397238 HERC1Q15751 4861 aa8.88□□□□□ -0.99
AGAP3-202ENST00000397238 BIRC6Q9NR09 4857 aa8.85□□□□□ -0.99
AGAP3-202ENST00000397238 PP632Q6XCG6 107 aa8.85□□□□□ -0.99
AGAP3-202ENST00000397238 PCLOQ9Y6V0 5065 aa8.76□□□□□ -1.01
AGAP3-202ENST00000397238 TNP1P09430 55 aa8.7□□□□□ -1.02
AGAP3-202ENST00000397238 KRTAP19-2Q3LHN2 52 aa8.67□□□□□ -1.02
AGAP3-202ENST00000397238 FAT4Q6V0I7 4981 aa8.59□□□□□ -1.03
AGAP3-202ENST00000397238 RNF213Q63HN8 5207 aa8.54□□□□□ -1.04
AGAP3-202ENST00000397238 HMCN2Q8NDA2 5059 aa8.53□□□□□ -1.04
AGAP3-202ENST00000397238 FLGP20930 4061 aaPredicted RBP8.49□□□□□ -1.05
AGAP3-202ENST00000397238 M0R2T5 61 aa8.44□□□□□ -1.06
AGAP3-202ENST00000397238 UBR4Q5T4S7 5183 aa8.41□□□□□ -1.06
AGAP3-202ENST00000397238 SPRR5A0A1B0GTR4 108 aa8.31□□□□□ -1.08
AGAP3-202ENST00000397238 LCE2CQ5TA81 110 aa8.27□□□□□ -1.09
AGAP3-202ENST00000397238 KRTAP23-1A1A580 65 aa8.26□□□□□ -1.09
AGAP3-202ENST00000397238 LCE3AQ5TA76 89 aa8.24□□□□□ -1.09
AGAP3-202ENST00000397238 KRTAP19-1Q8IUB9 90 aa8.16□□□□□ -1.1
AGAP3-202ENST00000397238 MT1HP80294 61 aa8.12□□□□□ -1.11
AGAP3-202ENST00000397238 KRTAP10-10P60014 251 aa8.1□□□□□ -1.11
AGAP3-202ENST00000397238 SPRR2GQ9BYE4 73 aa8.1□□□□□ -1.11
AGAP3-202ENST00000397238 MT1FP04733 61 aa7.98□□□□□ -1.13
AGAP3-202ENST00000397238 MT2AP02795 61 aa7.95□□□□□ -1.14
AGAP3-202ENST00000397238 KRTAP9-8Q9BYQ0 159 aa7.87□□□□□ -1.15
AGAP3-202ENST00000397238 KRTAP8-1Q8IUC2 63 aa7.82□□□□□ -1.16
AGAP3-202ENST00000397238 PRO2289Q9P1D8 64 aa7.8□□□□□ -1.16
AGAP3-202ENST00000397238 KRTAP12-3P60328 96 aa7.79□□□□□ -1.16
AGAP3-202ENST00000397238 KRTAP10-5P60370 271 aa7.74□□□□□ -1.17
AGAP3-202ENST00000397238 KRTAP10-12P60413 245 aa7.74□□□□□ -1.17
AGAP3-202ENST00000397238 MT1XP80297 61 aa7.72□□□□□ -1.17
AGAP3-202ENST00000397238 MT1BP07438 61 aa7.67□□□□□ -1.18
AGAP3-202ENST00000397238 KRTAP10-7P60409 375 aaPredicted RBP7.66□□□□□ -1.18
AGAP3-202ENST00000397238 INE1O15225 51 aa7.64□□□□□ -1.19
AGAP3-202ENST00000397238 KRTAP19-8Q3LI54 63 aa7.63□□□□□ -1.19
AGAP3-202ENST00000397238 USH2AO75445 5202 aa7.55□□□□□ -1.2
AGAP3-202ENST00000397238 KMT2DO14686 5537 aa7.53□□□□□ -1.2
AGAP3-202ENST00000397238 KRTAP9-3Q9BYQ3 159 aa7.53□□□□□ -1.2
AGAP3-202ENST00000397238 KRTAP19-5Q3LI72 72 aa7.39□□□□□ -1.23
AGAP3-202ENST00000397238 LCE2BO14633 110 aa7.35□□□□□ -1.23
AGAP3-202ENST00000397238 LCE3CQ5T5A8 94 aa7.29□□□□□ -1.24
AGAP3-202ENST00000397238 FSIP2Q5CZC0 6907 aa7.26□□□□□ -1.25
AGAP3-202ENST00000397238 KRTAP4-8A0A0G2JLE6 195 aa7.23□□□□□ -1.25
AGAP3-202ENST00000397238 KRTAP4-8Q9BYQ9 185 aa7.23□□□□□ -1.25
AGAP3-202ENST00000397238 LCE2AQ5TA79 106 aaPredicted RBP7.22□□□□□ -1.25
AGAP3-202ENST00000397238 KRTAP9-6A8MVA2 160 aa7.15□□□□□ -1.27
AGAP3-202ENST00000397238 KRTAP4-7Q9BYR0 210 aa7.12□□□□□ -1.27
AGAP3-202ENST00000397238 KRTAP19-7Q3SYF9 63 aa6.86□□□□□ -1.31
AGAP3-202ENST00000397238 SSPOA2VEC9 5147 aa6.85□□□□□ -1.31
AGAP3-202ENST00000397238 KRTAP2-3P0C7H8 128 aa6.82□□□□□ -1.32
AGAP3-202ENST00000397238 KRTAP2-4Q9BYR9 128 aa6.82□□□□□ -1.32
AGAP3-202ENST00000397238 KRTAP2-1Q9BYU5 128 aa6.82□□□□□ -1.32
AGAP3-202ENST00000397238 MT1LQ93083 61 aa6.69□□□□□ -1.34
AGAP3-202ENST00000397238 MT1EP04732 61 aa6.62□□□□□ -1.35
AGAP3-202ENST00000397238 LOC100996750A0A140TA64 210 aa6.62□□□□□ -1.35
AGAP3-202ENST00000397238 CRCT1Q9UGL9 99 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms