RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 CEND1Q8N111 149 aa4.18□□□□□ -1.74
CAPN3-208ENST00000397204 PSPHP1O15172 72 aa4.16□□□□□ -1.74
CAPN3-208ENST00000397204 MT3P25713 68 aa4.16□□□□□ -1.74
CAPN3-208ENST00000397204 C2orf91Q6ZV80 131 aa4.16□□□□□ -1.74
CAPN3-208ENST00000397204 COX6CP09669 75 aa4.15□□□□□ -1.75
CAPN3-208ENST00000397204 ATOX1O00244 68 aa4.14□□□□□ -1.75
CAPN3-208ENST00000397204 NDUFB1O75438 58 aa4.14□□□□□ -1.75
CAPN3-208ENST00000397204 WFDC13Q8IUB5 93 aa4.14□□□□□ -1.75
CAPN3-208ENST00000397204 FXYD2P54710 66 aa4.13□□□□□ -1.75
CAPN3-208ENST00000397204 RBM3P98179 157 aaKnown RBP4.13□□□□□ -1.75
CAPN3-208ENST00000397204 K7ERJ3 54 aa4.11□□□□□ -1.75
CAPN3-208ENST00000397204 Q6ZQT0 140 aa4.11□□□□□ -1.75
CAPN3-208ENST00000397204 ATP5EP56381 51 aaPredicted RBP4.1□□□□□ -1.75
CAPN3-208ENST00000397204 H1FX-AS1Q4G0G2 97 aa4.1□□□□□ -1.75
CAPN3-208ENST00000397204 C8orf17Q9NRJ1 99 aa4.09□□□□□ -1.75
CAPN3-208ENST00000397204 IGKV3D-7A0A0C4DH55 119 aa4.08□□□□□ -1.76
CAPN3-208ENST00000397204 A0A1B0GW54 56 aa4.08□□□□□ -1.76
CAPN3-208ENST00000397204 HIST1H4AP62805 103 aaKnown RBP4.08□□□□□ -1.76
CAPN3-208ENST00000397204 SCGB1C2P0DMR2 95 aa4.07□□□□□ -1.76
CAPN3-208ENST00000397204 CXCL6P80162 114 aa4.07□□□□□ -1.76
CAPN3-208ENST00000397204 KRTAP5-11Q6L8G4 156 aa4.07□□□□□ -1.76
CAPN3-208ENST00000397204 C7orf65Q6ZTY9 151 aa4.07□□□□□ -1.76
CAPN3-208ENST00000397204 SERP2Q8N6R1 65 aa4.07□□□□□ -1.76
CAPN3-208ENST00000397204 BAALC-AS2P0C853 105 aa4.06□□□□□ -1.76
CAPN3-208ENST00000397204 MUC12Q9UKN1 5478 aa4.06□□□□□ -1.76
CAPN3-208ENST00000397204 LINC01554Q52M75 96 aa4.05□□□□□ -1.76
CAPN3-208ENST00000397204 CYSTM1Q9H1C7 97 aa4.04□□□□□ -1.76
CAPN3-208ENST00000397204 NEBP20929 6669 aa4.03□□□□□ -1.76
CAPN3-208ENST00000397204 ACYP1P07311 99 aa4.03□□□□□ -1.76
CAPN3-208ENST00000397204 JMJD7-PLA2G4BH0Y9G9 81 aa4.02□□□□□ -1.77
CAPN3-208ENST00000397204 PDE6GP18545 87 aa4.02□□□□□ -1.77
CAPN3-208ENST00000397204 LCE1EQ5T753 118 aa4.02□□□□□ -1.77
CAPN3-208ENST00000397204 TMEM254Q8TBM7 123 aa4.02□□□□□ -1.77
CAPN3-208ENST00000397204 LOC110117498A0A087WWA1 95 aa4.01□□□□□ -1.77
CAPN3-208ENST00000397204 A6NN06 94 aa4.01□□□□□ -1.77
CAPN3-208ENST00000397204 MRPL34Q9BQ48 92 aaKnown RBP4.01□□□□□ -1.77
CAPN3-208ENST00000397204 LINC00643Q86TS7 51 aa4□□□□□ -1.77
CAPN3-208ENST00000397204 NREPQ16612 68 aa3.99□□□□□ -1.77
CAPN3-208ENST00000397204 MMP24-AS1A0A0U1RRL7 71 aa3.98□□□□□ -1.77
CAPN3-208ENST00000397204 hDV103S1A0JD37 113 aa3.98□□□□□ -1.77
CAPN3-208ENST00000397204 KRTAP20-1Q3LI63 56 aa3.98□□□□□ -1.77
CAPN3-208ENST00000397204 NDUFC1O43677 76 aa3.96□□□□□ -1.78
CAPN3-208ENST00000397204 MT1BP07438 61 aa3.96□□□□□ -1.78
CAPN3-208ENST00000397204 ATXN8Q156A1 80 aa3.96□□□□□ -1.78
CAPN3-208ENST00000397204 Q1T7F1 81 aa3.96□□□□□ -1.78
CAPN3-208ENST00000397204 Q5VV11 94 aa3.96□□□□□ -1.78
CAPN3-208ENST00000397204 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.96□□□□□ -1.78
CAPN3-208ENST00000397204 H7BZZ5 65 aa3.95□□□□□ -1.78
CAPN3-208ENST00000397204 KRTAP19-8Q3LI54 63 aa3.95□□□□□ -1.78
CAPN3-208ENST00000397204 Q5W150 140 aa3.95□□□□□ -1.78
CAPN3-208ENST00000397204 KMT2DO14686 5537 aa3.95□□□□□ -1.78
CAPN3-208ENST00000397204 SPRR2GQ9BYE4 73 aa3.94□□□□□ -1.78
CAPN3-208ENST00000397204 KRTAP5-9P26371 169 aa3.93□□□□□ -1.78
CAPN3-208ENST00000397204 KRTAP10-5P60370 271 aa3.93□□□□□ -1.78
CAPN3-208ENST00000397204 C14orf132Q9NPU4 83 aa3.93□□□□□ -1.78
CAPN3-208ENST00000397204 MDN1Q9NU22 5596 aa3.92□□□□□ -1.78
CAPN3-208ENST00000397204 K7EQZ3 153 aa3.92□□□□□ -1.78
CAPN3-208ENST00000397204 CSAG1Q6PB30 78 aa3.92□□□□□ -1.78
CAPN3-208ENST00000397204 KLKP1Q107X0 134 aa3.91□□□□□ -1.78
CAPN3-208ENST00000397204 BPY2O14599 106 aa3.88□□□□□ -1.79
CAPN3-208ENST00000397204 CASC2Q6XLA1 102 aa3.87□□□□□ -1.79
CAPN3-208ENST00000397204 S4R3F8 94 aa3.87□□□□□ -1.79
CAPN3-208ENST00000397204 HCG22E2RYF7 251 aa3.86□□□□□ -1.79
CAPN3-208ENST00000397204 KRTAP2-3P0C7H8 128 aa3.86□□□□□ -1.79
CAPN3-208ENST00000397204 KRTAP2-4Q9BYR9 128 aa3.86□□□□□ -1.79
CAPN3-208ENST00000397204 C20orf197Q8N268 126 aa3.84□□□□□ -1.79
CAPN3-208ENST00000397204 C1orf64Q8NEQ6 169 aa3.84□□□□□ -1.79
CAPN3-208ENST00000397204 CYP4F30PQ9H0H9 118 aa3.83□□□□□ -1.8
CAPN3-208ENST00000397204 TRAV7A0A075B6U4 112 aa3.82□□□□□ -1.8
CAPN3-208ENST00000397204 Q8N9L7 120 aa3.82□□□□□ -1.8
CAPN3-208ENST00000397204 CRIPTQ9P021 101 aa3.82□□□□□ -1.8
CAPN3-208ENST00000397204 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
CAPN3-208ENST00000397204 PRAC1Q96KF2 57 aa3.8□□□□□ -1.8
CAPN3-208ENST00000397204 OCR1Q9BZK8 76 aa3.8□□□□□ -1.8
CAPN3-208ENST00000397204 TRAV22A0A0B4J277 110 aa3.79□□□□□ -1.8
CAPN3-208ENST00000397204 SPTSSBQ8NFR3 76 aa3.79□□□□□ -1.8
CAPN3-208ENST00000397204 CDC42SE1Q9NRR8 79 aa3.79□□□□□ -1.8
CAPN3-208ENST00000397204 ATP5EP2Q5VTU8 51 aa3.78□□□□□ -1.8
CAPN3-208ENST00000397204 ADM2Q7Z4H4 148 aa3.77□□□□□ -1.81
CAPN3-208ENST00000397204 KRTAP10-12P60413 245 aa3.75□□□□□ -1.81
CAPN3-208ENST00000397204 SPRR2FQ96RM1 72 aa3.75□□□□□ -1.81
CAPN3-208ENST00000397204 TP53AIP1Q9HCN2 124 aa3.75□□□□□ -1.81
CAPN3-208ENST00000397204 ROMO1P60602 79 aa3.74□□□□□ -1.81
CAPN3-208ENST00000397204 LUZP6Q538Z0 58 aa3.74□□□□□ -1.81
CAPN3-208ENST00000397204 SPRR2EP22531 72 aa3.73□□□□□ -1.81
CAPN3-208ENST00000397204 SPRR2BP35325 72 aa3.73□□□□□ -1.81
CAPN3-208ENST00000397204 SPRR2AP35326 72 aa3.73□□□□□ -1.81
CAPN3-208ENST00000397204 UBL5Q9BZL1 73 aa3.73□□□□□ -1.81
CAPN3-208ENST00000397204 K7ERS5 55 aa3.72□□□□□ -1.81
CAPN3-208ENST00000397204 KRTAP2-1Q9BYU5 128 aa3.72□□□□□ -1.81
CAPN3-208ENST00000397204 PRO2289Q9P1D8 64 aa3.72□□□□□ -1.81
CAPN3-208ENST00000397204 A8MU10 97 aa3.71□□□□□ -1.82
CAPN3-208ENST00000397204 CHKB-CPT1BH3BT56 60 aa3.71□□□□□ -1.82
CAPN3-208ENST00000397204 A6NED7 52 aa3.7□□□□□ -1.82
CAPN3-208ENST00000397204 H0YAA0 97 aa3.69□□□□□ -1.82
CAPN3-208ENST00000397204 A0A087WVE0 104 aa3.68□□□□□ -1.82
CAPN3-208ENST00000397204 KRTAP8-1Q8IUC2 63 aa3.68□□□□□ -1.82
CAPN3-208ENST00000397204 LOC101927531A0A1B0GV80 90 aa3.67□□□□□ -1.82
CAPN3-208ENST00000397204 CAMK2N1Q7Z7J9 78 aa3.67□□□□□ -1.82
CAPN3-208ENST00000397204 SNURFQ9Y675 71 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms