RNA–Protein interactions for RNA: ENST00000397043.7

ATP2A3-206, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A3, Length 3,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-206ENST00000397043 K7ERS5 55 aa8.28□□□□□ -1.08
ATP2A3-206ENST00000397043 KRTAP21-3Q3LHN1 58 aa8.28□□□□□ -1.08
ATP2A3-206ENST00000397043 HSPG2P98160 4391 aa8.27□□□□□ -1.09
ATP2A3-206ENST00000397043 FAT3Q8TDW7 4589 aa8.24□□□□□ -1.09
ATP2A3-206ENST00000397043 KRTAP10-8P60410 259 aa8.2□□□□□ -1.1
ATP2A3-206ENST00000397043 RPL37P61927 97 aaKnown RBP8.19□□□□□ -1.1
ATP2A3-206ENST00000397043 XP32Q5T750 250 aa8.19□□□□□ -1.1
ATP2A3-206ENST00000397043 S4R3F8 94 aa8.16□□□□□ -1.1
ATP2A3-206ENST00000397043 TNXBP22105 4242 aa8.15□□□□□ -1.1
ATP2A3-206ENST00000397043 KIAA1109Q2LD37 5005 aa8.13□□□□□ -1.11
ATP2A3-206ENST00000397043 KRTAP3-3Q9BYR6 98 aa8.12□□□□□ -1.11
ATP2A3-206ENST00000397043 KRTAP25-1Q3LHN0 102 aa8.11□□□□□ -1.11
ATP2A3-206ENST00000397043 KRTAP13-4Q3LI77 160 aa8.09□□□□□ -1.11
ATP2A3-206ENST00000397043 KRTAP10-6P60371 365 aaPredicted RBP8.08□□□□□ -1.12
ATP2A3-206ENST00000397043 RYR3Q15413 4870 aa8.07□□□□□ -1.12
ATP2A3-206ENST00000397043 P0C880 135 aa8.07□□□□□ -1.12
ATP2A3-206ENST00000397043 KRTAP17-1Q9BYP8 105 aa8.05□□□□□ -1.12
ATP2A3-206ENST00000397043 LPAP08519 4548 aa8.03□□□□□ -1.12
ATP2A3-206ENST00000397043 RYR1P21817 5038 aa8.01□□□□□ -1.13
ATP2A3-206ENST00000397043 ROMO1P60602 79 aa8□□□□□ -1.13
ATP2A3-206ENST00000397043 LRP2P98164 4655 aa8□□□□□ -1.13
ATP2A3-206ENST00000397043 KRTAP3-2Q9BYR7 98 aa8□□□□□ -1.13
ATP2A3-206ENST00000397043 SPINT4Q6UDR6 99 aa7.98□□□□□ -1.13
ATP2A3-206ENST00000397043 MT1HL1P0DM35 61 aa7.95□□□□□ -1.14
ATP2A3-206ENST00000397043 C10orf95Q9H7T3 257 aa7.9□□□□□ -1.14
ATP2A3-206ENST00000397043 KRTAP12-2P59991 146 aa7.85□□□□□ -1.15
ATP2A3-206ENST00000397043 NDUFAF8A1L188 74 aa7.81□□□□□ -1.16
ATP2A3-206ENST00000397043 EPPK1P58107 5090 aaKnown RBP7.81□□□□□ -1.16
ATP2A3-206ENST00000397043 ABCA13Q86UQ4 5058 aa7.81□□□□□ -1.16
ATP2A3-206ENST00000397043 TPRXLQ17RH7 258 aa7.79□□□□□ -1.16
ATP2A3-206ENST00000397043 KRTAP12-1P59990 96 aa7.73□□□□□ -1.17
ATP2A3-206ENST00000397043 KRTAP4-5Q9BYR2 181 aa7.73□□□□□ -1.17
ATP2A3-206ENST00000397043 M0QZ58 72 aa7.72□□□□□ -1.17
ATP2A3-206ENST00000397043 R4GN34 69 aa7.68□□□□□ -1.18
ATP2A3-206ENST00000397043 J3QL48 77 aa7.63□□□□□ -1.19
ATP2A3-206ENST00000397043 SEC61BP60468 96 aaKnown RBP7.59□□□□□ -1.2
ATP2A3-206ENST00000397043 MUC2Q02817 5179 aa7.51□□□□□ -1.21
ATP2A3-206ENST00000397043 LORP23490 312 aaPredicted RBP7.51□□□□□ -1.21
ATP2A3-206ENST00000397043 KRTAP4-1Q9BYQ7 146 aa7.48□□□□□ -1.21
ATP2A3-206ENST00000397043 HERC2O95714 4834 aa7.44□□□□□ -1.22
ATP2A3-206ENST00000397043 MUC17Q685J3 4493 aa7.39□□□□□ -1.23
ATP2A3-206ENST00000397043 CAMK2N1Q7Z7J9 78 aa7.37□□□□□ -1.23
ATP2A3-206ENST00000397043 KRTAP15-1Q3LI76 137 aa7.32□□□□□ -1.24
ATP2A3-206ENST00000397043 A0A0A0MQY5 61 aa7.31□□□□□ -1.24
ATP2A3-206ENST00000397043 HERC1Q15751 4861 aa7.17□□□□□ -1.26
ATP2A3-206ENST00000397043 KRTAP19-2Q3LHN2 52 aa7.14□□□□□ -1.27
ATP2A3-206ENST00000397043 PLAC4Q8WY50 150 aa7.14□□□□□ -1.27
ATP2A3-206ENST00000397043 FAT4Q6V0I7 4981 aa7.13□□□□□ -1.27
ATP2A3-206ENST00000397043 LUZP6Q538Z0 58 aa7.1□□□□□ -1.27
ATP2A3-206ENST00000397043 PCLOQ9Y6V0 5065 aa7.06□□□□□ -1.28
ATP2A3-206ENST00000397043 FLGP20930 4061 aaPredicted RBP7.05□□□□□ -1.28
ATP2A3-206ENST00000397043 M0R2T5 61 aa7.03□□□□□ -1.28
ATP2A3-206ENST00000397043 BIRC6Q9NR09 4857 aa7□□□□□ -1.29
ATP2A3-206ENST00000397043 RNF213Q63HN8 5207 aa6.98□□□□□ -1.29
ATP2A3-206ENST00000397043 PP632Q6XCG6 107 aa6.96□□□□□ -1.3
ATP2A3-206ENST00000397043 TNP1P09430 55 aa6.95□□□□□ -1.3
ATP2A3-206ENST00000397043 HMCN2Q8NDA2 5059 aa6.9□□□□□ -1.3
ATP2A3-206ENST00000397043 UBR4Q5T4S7 5183 aa6.83□□□□□ -1.32
ATP2A3-206ENST00000397043 LCE2CQ5TA81 110 aa6.77□□□□□ -1.32
ATP2A3-206ENST00000397043 KRTAP10-10P60014 251 aa6.76□□□□□ -1.33
ATP2A3-206ENST00000397043 KRTAP19-1Q8IUB9 90 aa6.7□□□□□ -1.34
ATP2A3-206ENST00000397043 MT1HP80294 61 aa6.67□□□□□ -1.34
ATP2A3-206ENST00000397043 SPRR2GQ9BYE4 73 aa6.66□□□□□ -1.34
ATP2A3-206ENST00000397043 MT1FP04733 61 aa6.61□□□□□ -1.35
ATP2A3-206ENST00000397043 MT2AP02795 61 aa6.58□□□□□ -1.36
ATP2A3-206ENST00000397043 LCE3AQ5TA76 89 aa6.58□□□□□ -1.36
ATP2A3-206ENST00000397043 KRTAP23-1A1A580 65 aa6.53□□□□□ -1.36
ATP2A3-206ENST00000397043 KRTAP9-8Q9BYQ0 159 aa6.48□□□□□ -1.37
ATP2A3-206ENST00000397043 SPRR5A0A1B0GTR4 108 aa6.37□□□□□ -1.39
ATP2A3-206ENST00000397043 MT1BP07438 61 aa6.33□□□□□ -1.4
ATP2A3-206ENST00000397043 KRTAP10-5P60370 271 aa6.32□□□□□ -1.4
ATP2A3-206ENST00000397043 MT1XP80297 61 aa6.31□□□□□ -1.4
ATP2A3-206ENST00000397043 KRTAP19-8Q3LI54 63 aa6.31□□□□□ -1.4
ATP2A3-206ENST00000397043 KRTAP10-12P60413 245 aa6.3□□□□□ -1.4
ATP2A3-206ENST00000397043 USH2AO75445 5202 aa6.28□□□□□ -1.4
ATP2A3-206ENST00000397043 KRTAP12-3P60328 96 aa6.25□□□□□ -1.41
ATP2A3-206ENST00000397043 KRTAP8-1Q8IUC2 63 aa6.24□□□□□ -1.41
ATP2A3-206ENST00000397043 KRTAP10-7P60409 375 aaPredicted RBP6.24□□□□□ -1.41
ATP2A3-206ENST00000397043 KRTAP9-3Q9BYQ3 159 aa6.18□□□□□ -1.42
ATP2A3-206ENST00000397043 KMT2DO14686 5537 aa6.17□□□□□ -1.42
ATP2A3-206ENST00000397043 PRO2289Q9P1D8 64 aa6.15□□□□□ -1.43
ATP2A3-206ENST00000397043 LCE2BO14633 110 aa6□□□□□ -1.45
ATP2A3-206ENST00000397043 KRTAP19-5Q3LI72 72 aa5.98□□□□□ -1.45
ATP2A3-206ENST00000397043 KRTAP4-8A0A0G2JLE6 195 aa5.93□□□□□ -1.46
ATP2A3-206ENST00000397043 KRTAP4-8Q9BYQ9 185 aa5.93□□□□□ -1.46
ATP2A3-206ENST00000397043 FSIP2Q5CZC0 6907 aa5.91□□□□□ -1.46
ATP2A3-206ENST00000397043 LCE3CQ5T5A8 94 aa5.82□□□□□ -1.48
ATP2A3-206ENST00000397043 LCE2AQ5TA79 106 aaPredicted RBP5.73□□□□□ -1.49
ATP2A3-206ENST00000397043 KRTAP4-7Q9BYR0 210 aa5.72□□□□□ -1.49
ATP2A3-206ENST00000397043 INE1O15225 51 aa5.71□□□□□ -1.49
ATP2A3-206ENST00000397043 KRTAP9-6A8MVA2 160 aa5.64□□□□□ -1.51
ATP2A3-206ENST00000397043 KRTAP19-7Q3SYF9 63 aa5.61□□□□□ -1.51
ATP2A3-206ENST00000397043 SSPOA2VEC9 5147 aa5.56□□□□□ -1.52
ATP2A3-206ENST00000397043 OBSCNQ5VST9 7968 aa5.47□□□□□ -1.53
ATP2A3-206ENST00000397043 MT1LQ93083 61 aa5.46□□□□□ -1.54
ATP2A3-206ENST00000397043 MT1EP04732 61 aa5.45□□□□□ -1.54
ATP2A3-206ENST00000397043 MUC12Q9UKN1 5478 aa5.43□□□□□ -1.54
ATP2A3-206ENST00000397043 DSTQ03001 7570 aaKnown RBP5.42□□□□□ -1.54
ATP2A3-206ENST00000397043 FCGBPQ9Y6R7 5405 aaPredicted RBP5.39□□□□□ -1.55
ATP2A3-206ENST00000397043 CRCT1Q9UGL9 99 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms