RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 KRTAP10-5P60370 271 aa8.05□□□□□ -1.12
FXN-203ENST00000396366 NEBP20929 6669 aa8.05□□□□□ -1.12
FXN-203ENST00000396366 FAM240AA0A1B0GVK7 77 aa8.03□□□□□ -1.12
FXN-203ENST00000396366 H0Y9P7 68 aa8.03□□□□□ -1.12
FXN-203ENST00000396366 UQCRQO14949 82 aa8.03□□□□□ -1.12
FXN-203ENST00000396366 ATP5EP2Q5VTU8 51 aa8.02□□□□□ -1.13
FXN-203ENST00000396366 MUC12Q9UKN1 5478 aa7.99□□□□□ -1.13
FXN-203ENST00000396366 CRIPTQ9P021 101 aa7.98□□□□□ -1.13
FXN-203ENST00000396366 IMUPQ9GZP8 106 aa7.97□□□□□ -1.13
FXN-203ENST00000396366 ATOX1O00244 68 aa7.96□□□□□ -1.14
FXN-203ENST00000396366 NDUFC1O43677 76 aa7.95□□□□□ -1.14
FXN-203ENST00000396366 H0YAA0 97 aa7.9□□□□□ -1.14
FXN-203ENST00000396366 LINC00643Q86TS7 51 aa7.9□□□□□ -1.14
FXN-203ENST00000396366 LINC00208Q96KT6 92 aa7.9□□□□□ -1.14
FXN-203ENST00000396366 ADM2Q7Z4H4 148 aa7.88□□□□□ -1.15
FXN-203ENST00000396366 A8MUN3 132 aa7.85□□□□□ -1.15
FXN-203ENST00000396366 OCR1Q9BZK8 76 aa7.84□□□□□ -1.15
FXN-203ENST00000396366 KRTAP5-9P26371 169 aa7.81□□□□□ -1.16
FXN-203ENST00000396366 KMT2DO14686 5537 aa7.81□□□□□ -1.16
FXN-203ENST00000396366 A0A1B0GV90 55 aa7.79□□□□□ -1.16
FXN-203ENST00000396366 MP68P56378 58 aa7.79□□□□□ -1.16
FXN-203ENST00000396366 MDN1Q9NU22 5596 aa7.77□□□□□ -1.17
FXN-203ENST00000396366 P0C880 135 aa7.71□□□□□ -1.18
FXN-203ENST00000396366 MT1XP80297 61 aa7.71□□□□□ -1.18
FXN-203ENST00000396366 KRTAP20-1Q3LI63 56 aa7.68□□□□□ -1.18
FXN-203ENST00000396366 PLAC4Q8WY50 150 aa7.66□□□□□ -1.18
FXN-203ENST00000396366 DMAC1Q96GE9 116 aa7.64□□□□□ -1.19
FXN-203ENST00000396366 PRO2289Q9P1D8 64 aa7.64□□□□□ -1.19
FXN-203ENST00000396366 R4GN34 69 aa7.64□□□□□ -1.19
FXN-203ENST00000396366 H3BPC8 53 aa7.63□□□□□ -1.19
FXN-203ENST00000396366 M0QZ58 72 aa7.6□□□□□ -1.19
FXN-203ENST00000396366 SCGB1A1P11684 91 aa7.6□□□□□ -1.19
FXN-203ENST00000396366 SPRR2FQ96RM1 72 aa7.58□□□□□ -1.2
FXN-203ENST00000396366 J3QR89 54 aa7.56□□□□□ -1.2
FXN-203ENST00000396366 C20orf197Q8N268 126 aa7.56□□□□□ -1.2
FXN-203ENST00000396366 LINC01554Q52M75 96 aa7.53□□□□□ -1.2
FXN-203ENST00000396366 KRTAP8-1Q8IUC2 63 aa7.5□□□□□ -1.21
FXN-203ENST00000396366 SPRR2EP22531 72 aa7.49□□□□□ -1.21
FXN-203ENST00000396366 SPRR2BP35325 72 aa7.49□□□□□ -1.21
FXN-203ENST00000396366 SPRR2AP35326 72 aa7.49□□□□□ -1.21
FXN-203ENST00000396366 KRTAP12-2P59991 146 aa7.48□□□□□ -1.21
FXN-203ENST00000396366 KRTAP4-8A0A0G2JLE6 195 aa7.46□□□□□ -1.22
FXN-203ENST00000396366 KRTAP4-8Q9BYQ9 185 aa7.46□□□□□ -1.22
FXN-203ENST00000396366 TRAV7A0A075B6U4 112 aa7.45□□□□□ -1.22
FXN-203ENST00000396366 KRTAP2-3P0C7H8 128 aa7.45□□□□□ -1.22
FXN-203ENST00000396366 KRTAP2-4Q9BYR9 128 aa7.45□□□□□ -1.22
FXN-203ENST00000396366 MT-ATP8P03928 68 aa7.42□□□□□ -1.22
FXN-203ENST00000396366 ACYP2P14621 99 aa7.42□□□□□ -1.22
FXN-203ENST00000396366 LCE1AQ5T7P2 110 aa7.39□□□□□ -1.23
FXN-203ENST00000396366 KRTAP10-7P60409 375 aaPredicted RBP7.37□□□□□ -1.23
FXN-203ENST00000396366 SMIM20Q8N5G0 67 aa7.31□□□□□ -1.24
FXN-203ENST00000396366 SPTSSBQ8NFR3 76 aa7.31□□□□□ -1.24
FXN-203ENST00000396366 KRTAP10-12P60413 245 aa7.3□□□□□ -1.24
FXN-203ENST00000396366 SNURFQ9Y675 71 aa7.29□□□□□ -1.24
FXN-203ENST00000396366 CHKB-CPT1BH3BT56 60 aa7.28□□□□□ -1.24
FXN-203ENST00000396366 K7ERU9 68 aa7.24□□□□□ -1.25
FXN-203ENST00000396366 SPRR2DP22532 72 aa7.24□□□□□ -1.25
FXN-203ENST00000396366 KRTAP2-2Q9BYT5 123 aa7.2□□□□□ -1.26
FXN-203ENST00000396366 KRTAP2-1Q9BYU5 128 aa7.2□□□□□ -1.26
FXN-203ENST00000396366 KRTAP13-4Q3LI77 160 aa7.17□□□□□ -1.26
FXN-203ENST00000396366 SPANXA2-OT1Q8N9U9 137 aa7.13□□□□□ -1.27
FXN-203ENST00000396366 SERP2Q8N6R1 65 aa7.07□□□□□ -1.28
FXN-203ENST00000396366 LCE3BQ5TA77 95 aa7.05□□□□□ -1.28
FXN-203ENST00000396366 CAMK2N1Q7Z7J9 78 aa7.02□□□□□ -1.29
FXN-203ENST00000396366 COA5Q86WW8 74 aa6.98□□□□□ -1.29
FXN-203ENST00000396366 A0A0D9SG42 100 aa6.92□□□□□ -1.3
FXN-203ENST00000396366 KRTAP19-7Q3SYF9 63 aa6.89□□□□□ -1.31
FXN-203ENST00000396366 SPATA8Q6RVD6 105 aa6.89□□□□□ -1.31
FXN-203ENST00000396366 SEC61GP60059 68 aa6.86□□□□□ -1.31
FXN-203ENST00000396366 SERP1Q9Y6X1 66 aa6.86□□□□□ -1.31
FXN-203ENST00000396366 MT1EP04732 61 aa6.83□□□□□ -1.32
FXN-203ENST00000396366 COX7CP15954 63 aa6.82□□□□□ -1.32
FXN-203ENST00000396366 LCE5AQ5TCM9 118 aa6.82□□□□□ -1.32
FXN-203ENST00000396366 CYSTM1Q9H1C7 97 aa6.82□□□□□ -1.32
FXN-203ENST00000396366 A0A1B0GU33 70 aa6.81□□□□□ -1.32
FXN-203ENST00000396366 SPINT4Q6UDR6 99 aa6.81□□□□□ -1.32
FXN-203ENST00000396366 DSTQ03001 7570 aaKnown RBP6.79□□□□□ -1.32
FXN-203ENST00000396366 KRTAP19-3Q7Z4W3 81 aa6.77□□□□□ -1.33
FXN-203ENST00000396366 H7BZZ5 65 aa6.76□□□□□ -1.33
FXN-203ENST00000396366 KRTAP12-1P59990 96 aa6.76□□□□□ -1.33
FXN-203ENST00000396366 H3BS24 57 aa6.74□□□□□ -1.33
FXN-203ENST00000396366 KRTAP19-5Q3LI72 72 aa6.71□□□□□ -1.34
FXN-203ENST00000396366 KRTAP4-9Q9BYQ8 210 aa6.65□□□□□ -1.34
FXN-203ENST00000396366 A8MU10 97 aa6.62□□□□□ -1.35
FXN-203ENST00000396366 A0A1B0GU69 56 aa6.61□□□□□ -1.35
FXN-203ENST00000396366 MT1GP13640 62 aa6.59□□□□□ -1.35
FXN-203ENST00000396366 GPR98Q8WXG9 6306 aa6.59□□□□□ -1.36
FXN-203ENST00000396366 SMIM26A0A096LP01 95 aa6.57□□□□□ -1.36
FXN-203ENST00000396366 LOC100996750A0A140TA64 210 aa6.52□□□□□ -1.37
FXN-203ENST00000396366 KRTAP4-6Q9BYQ5 205 aa6.52□□□□□ -1.37
FXN-203ENST00000396366 MT1MQ8N339 61 aa6.51□□□□□ -1.37
FXN-203ENST00000396366 MT1LQ93083 61 aa6.51□□□□□ -1.37
FXN-203ENST00000396366 C10orf95Q9H7T3 257 aa6.51□□□□□ -1.37
FXN-203ENST00000396366 ANAPC13Q9BS18 74 aa6.5□□□□□ -1.37
FXN-203ENST00000396366 LCE3AQ5TA76 89 aa6.49□□□□□ -1.37
FXN-203ENST00000396366 PP632Q6XCG6 107 aa6.49□□□□□ -1.37
FXN-203ENST00000396366 CCDC179H3BU77 68 aa6.44□□□□□ -1.38
FXN-203ENST00000396366 LCE1DQ5T752 114 aa6.44□□□□□ -1.38
FXN-203ENST00000396366 KRTAP4-3Q9BYR4 195 aa6.44□□□□□ -1.38
FXN-203ENST00000396366 TNP1P09430 55 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms