RNA–Protein interactions for RNA: ENST00000395840.6

RAE1-202, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-202ENST00000395840 ANAPC11Q9NYG5 84 aa5.1□□□□□ -1.59
RAE1-202ENST00000395840 SSBP3-AS1Q7Z2R9 100 aa5.08□□□□□ -1.6
RAE1-202ENST00000395840 IGKV2D-30A0A075B6S6 120 aa5.07□□□□□ -1.6
RAE1-202ENST00000395840 ABCA13Q86UQ4 5058 aa5.07□□□□□ -1.6
RAE1-202ENST00000395840 NDUFAF8A1L188 74 aa5.06□□□□□ -1.6
RAE1-202ENST00000395840 SPINT4Q6UDR6 99 aa5.05□□□□□ -1.6
RAE1-202ENST00000395840 KRTAP16-1A8MUX0 517 aa5.05□□□□□ -1.6
RAE1-202ENST00000395840 KRTAP1-4P0C5Y4 121 aa5.04□□□□□ -1.6
RAE1-202ENST00000395840 KRTAP10-8P60410 259 aa5.04□□□□□ -1.6
RAE1-202ENST00000395840 FAT3Q8TDW7 4589 aa5.02□□□□□ -1.61
RAE1-202ENST00000395840 C20orf166-AS1Q96NR2 134 aa5.02□□□□□ -1.61
RAE1-202ENST00000395840 PCLOQ9Y6V0 5065 aa5.01□□□□□ -1.61
RAE1-202ENST00000395840 A0A1B0GU33 70 aa5.01□□□□□ -1.61
RAE1-202ENST00000395840 TYMSOSQ8TAI1 123 aa5.01□□□□□ -1.61
RAE1-202ENST00000395840 MYCBP2O75592 4640 aa5.01□□□□□ -1.61
RAE1-202ENST00000395840 MT1HL1P0DM35 61 aa5.01□□□□□ -1.61
RAE1-202ENST00000395840 DMBT1Q9UGM3 2413 aaPredicted RBP4.97□□□□□ -1.61
RAE1-202ENST00000395840 K7ERS5 55 aa4.97□□□□□ -1.61
RAE1-202ENST00000395840 LRP1Q07954 4544 aaKnown RBP4.97□□□□□ -1.61
RAE1-202ENST00000395840 H1FX-AS1Q4G0G2 97 aa4.96□□□□□ -1.61
RAE1-202ENST00000395840 KRTAP15-1Q3LI76 137 aa4.95□□□□□ -1.62
RAE1-202ENST00000395840 KRTAP13-2Q52LG2 175 aa4.95□□□□□ -1.62
RAE1-202ENST00000395840 TNXBP22105 4242 aa4.94□□□□□ -1.62
RAE1-202ENST00000395840 RPS29P62273 56 aaKnown RBP4.93□□□□□ -1.62
RAE1-202ENST00000395840 TPRXLQ17RH7 258 aa4.93□□□□□ -1.62
RAE1-202ENST00000395840 LCE2BO14633 110 aa4.89□□□□□ -1.63
RAE1-202ENST00000395840 C10orf95Q9H7T3 257 aa4.87□□□□□ -1.63
RAE1-202ENST00000395840 COX6B2Q6YFQ2 88 aa4.85□□□□□ -1.63
RAE1-202ENST00000395840 HERC1Q15751 4861 aa4.84□□□□□ -1.63
RAE1-202ENST00000395840 RPL37P61927 97 aaKnown RBP4.8□□□□□ -1.64
RAE1-202ENST00000395840 LUZP6Q538Z0 58 aa4.79□□□□□ -1.64
RAE1-202ENST00000395840 KRTAP3-1Q9BYR8 98 aa4.78□□□□□ -1.64
RAE1-202ENST00000395840 A0A0D9SG42 100 aa4.76□□□□□ -1.65
RAE1-202ENST00000395840 HMCN2Q8NDA2 5059 aa4.75□□□□□ -1.65
RAE1-202ENST00000395840 KRTAP13-4Q3LI77 160 aa4.71□□□□□ -1.66
RAE1-202ENST00000395840 SEC61BP60468 96 aaKnown RBP4.69□□□□□ -1.66
RAE1-202ENST00000395840 KRTAP10-6P60371 365 aaPredicted RBP4.66□□□□□ -1.66
RAE1-202ENST00000395840 XP32Q5T750 250 aa4.64□□□□□ -1.67
RAE1-202ENST00000395840 S4R3F8 94 aa4.63□□□□□ -1.67
RAE1-202ENST00000395840 LRP2P98164 4655 aa4.62□□□□□ -1.67
RAE1-202ENST00000395840 C9orf92A6NGG3 77 aa4.61□□□□□ -1.67
RAE1-202ENST00000395840 LCE2CQ5TA81 110 aa4.61□□□□□ -1.67
RAE1-202ENST00000395840 LPAP08519 4548 aa4.6□□□□□ -1.67
RAE1-202ENST00000395840 KRTAP12-2P59991 146 aa4.6□□□□□ -1.67
RAE1-202ENST00000395840 MUC17Q685J3 4493 aa4.56□□□□□ -1.68
RAE1-202ENST00000395840 UBR4Q5T4S7 5183 aa4.51□□□□□ -1.69
RAE1-202ENST00000395840 KRTAP12-1P59990 96 aa4.51□□□□□ -1.69
RAE1-202ENST00000395840 LCE2AQ5TA79 106 aaPredicted RBP4.51□□□□□ -1.69
RAE1-202ENST00000395840 PLAC4Q8WY50 150 aa4.51□□□□□ -1.69
RAE1-202ENST00000395840 RNF213Q63HN8 5207 aa4.44□□□□□ -1.7
RAE1-202ENST00000395840 LORP23490 312 aaPredicted RBP4.42□□□□□ -1.7
RAE1-202ENST00000395840 KRTAP4-1Q9BYQ7 146 aa4.41□□□□□ -1.7
RAE1-202ENST00000395840 KRTAP23-1A1A580 65 aa4.35□□□□□ -1.71
RAE1-202ENST00000395840 MUC2Q02817 5179 aa4.35□□□□□ -1.71
RAE1-202ENST00000395840 M0QZ58 72 aa4.31□□□□□ -1.72
RAE1-202ENST00000395840 KRTAP19-2Q3LHN2 52 aa4.29□□□□□ -1.72
RAE1-202ENST00000395840 FAT4Q6V0I7 4981 aa4.28□□□□□ -1.72
RAE1-202ENST00000395840 MT1HP80294 61 aa4.25□□□□□ -1.73
RAE1-202ENST00000395840 M0R2T5 61 aa4.24□□□□□ -1.73
RAE1-202ENST00000395840 CAMK2N1Q7Z7J9 78 aa4.22□□□□□ -1.73
RAE1-202ENST00000395840 FLGP20930 4061 aaPredicted RBP4.21□□□□□ -1.74
RAE1-202ENST00000395840 PP632Q6XCG6 107 aa4.16□□□□□ -1.74
RAE1-202ENST00000395840 PRO2289Q9P1D8 64 aa4.15□□□□□ -1.74
RAE1-202ENST00000395840 R4GN34 69 aa4.15□□□□□ -1.75
RAE1-202ENST00000395840 SPRR5A0A1B0GTR4 108 aa4.07□□□□□ -1.76
RAE1-202ENST00000395840 KRTAP9-8Q9BYQ0 159 aa4.04□□□□□ -1.76
RAE1-202ENST00000395840 MT2AP02795 61 aa4□□□□□ -1.77
RAE1-202ENST00000395840 KRTAP9-2Q9BYQ4 174 aa4□□□□□ -1.77
RAE1-202ENST00000395840 KRTAP10-10P60014 251 aa4□□□□□ -1.77
RAE1-202ENST00000395840 INE1O15225 51 aa3.97□□□□□ -1.77
RAE1-202ENST00000395840 MT1FP04733 61 aa3.95□□□□□ -1.78
RAE1-202ENST00000395840 KRTAP9-3Q9BYQ3 159 aa3.91□□□□□ -1.78
RAE1-202ENST00000395840 TNP1P09430 55 aa3.9□□□□□ -1.79
RAE1-202ENST00000395840 CRCT1Q9UGL9 99 aa3.84□□□□□ -1.8
RAE1-202ENST00000395840 KRTAP9-6A0A140TA67 174 aa3.82□□□□□ -1.8
RAE1-202ENST00000395840 SPRR2GQ9BYE4 73 aa3.82□□□□□ -1.8
RAE1-202ENST00000395840 LOC100996750A0A140TA64 210 aa3.78□□□□□ -1.8
RAE1-202ENST00000395840 KRTAP19-1Q8IUB9 90 aa3.78□□□□□ -1.8
RAE1-202ENST00000395840 KRTAP4-6Q9BYQ5 205 aa3.78□□□□□ -1.8
RAE1-202ENST00000395840 KRTAP19-8Q3LI54 63 aa3.76□□□□□ -1.81
RAE1-202ENST00000395840 USH2AO75445 5202 aa3.73□□□□□ -1.81
RAE1-202ENST00000395840 KRTAP19-6Q3LI70 58 aa3.72□□□□□ -1.81
RAE1-202ENST00000395840 FSIP2Q5CZC0 6907 aa3.69□□□□□ -1.82
RAE1-202ENST00000395840 MT1BP07438 61 aa3.68□□□□□ -1.82
RAE1-202ENST00000395840 SSPOA2VEC9 5147 aa3.66□□□□□ -1.82
RAE1-202ENST00000395840 LCE3AQ5TA76 89 aa3.65□□□□□ -1.82
RAE1-202ENST00000395840 KRTAP10-5P60370 271 aa3.61□□□□□ -1.83
RAE1-202ENST00000395840 FCGBPQ9Y6R7 5405 aaPredicted RBP3.56□□□□□ -1.84
RAE1-202ENST00000395840 KRTAP4-8Q9BYQ9 185 aa3.55□□□□□ -1.84
RAE1-202ENST00000395840 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.55□□□□□ -1.84
RAE1-202ENST00000395840 KRTAP8-1Q8IUC2 63 aa3.51□□□□□ -1.85
RAE1-202ENST00000395840 MT1XP80297 61 aa3.51□□□□□ -1.85
RAE1-202ENST00000395840 KRTAP10-12P60413 245 aa3.49□□□□□ -1.85
RAE1-202ENST00000395840 KRTAP4-12Q9BQ66 201 aa3.47□□□□□ -1.85
RAE1-202ENST00000395840 KRTAP9-7A8MTY7 169 aa3.45□□□□□ -1.86
RAE1-202ENST00000395840 KRTAP12-3P60328 96 aa3.43□□□□□ -1.86
RAE1-202ENST00000395840 KRTAP6-3Q3LI67 103 aa3.42□□□□□ -1.86
RAE1-202ENST00000395840 LCE3BQ5TA77 95 aa3.41□□□□□ -1.86
RAE1-202ENST00000395840 MACF1Q9UPN3 7388 aaKnown RBP3.4□□□□□ -1.86
RAE1-202ENST00000395840 LCE4AQ5TA78 99 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms