RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
HMGB1P10-201ENST00000395823 CSMD3Q7Z407 3707 aa1.49□□□□□ -2.17
HMGB1P10-201ENST00000395823 KNL1Q8NG31 2342 aa1.49□□□□□ -2.17
HMGB1P10-201ENST00000395823 SPRR1AP35321 89 aa1.49□□□□□ -2.17
HMGB1P10-201ENST00000395823 TFF3Q07654 80 aa1.49□□□□□ -2.17
HMGB1P10-201ENST00000395823 GPR98Q8WXG9 6306 aa1.49□□□□□ -2.17
HMGB1P10-201ENST00000395823 ROS1P08922 2347 aa1.48□□□□□ -2.17
HMGB1P10-201ENST00000395823 LINC01590Q5TEZ4 76 aa1.48□□□□□ -2.17
HMGB1P10-201ENST00000395823 LYSTQ99698 3801 aa1.48□□□□□ -2.17
HMGB1P10-201ENST00000395823 APLNQ9ULZ1 77 aa1.48□□□□□ -2.17
HMGB1P10-201ENST00000395823 HMCN2Q8NDA2 5059 aa1.48□□□□□ -2.17
HMGB1P10-201ENST00000395823 IAPPP10997 89 aa1.47□□□□□ -2.17
HMGB1P10-201ENST00000395823 PRB3Q04118 309 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P10-201ENST00000395823 DEFB105AQ8NG35 78 aa1.47□□□□□ -2.17
HMGB1P10-201ENST00000395823 H1FX-AS1Q4G0G2 97 aa1.46□□□□□ -2.18
HMGB1P10-201ENST00000395823 WFDC13Q8IUB5 93 aa1.46□□□□□ -2.18
HMGB1P10-201ENST00000395823 DEFB106AQ8N104 65 aa1.45□□□□□ -2.18
HMGB1P10-201ENST00000395823 KMT2AQ03164 3969 aa1.45□□□□□ -2.18
HMGB1P10-201ENST00000395823 H3BUA1 57 aa1.44□□□□□ -2.18
HMGB1P10-201ENST00000395823 NEBP20929 6669 aa1.43□□□□□ -2.18
HMGB1P10-201ENST00000395823 DEFB130BP0DP73 79 aa1.43□□□□□ -2.18
HMGB1P10-201ENST00000395823 DEFB130AP0DP74 79 aa1.43□□□□□ -2.18
HMGB1P10-201ENST00000395823 SPRR1BP22528 89 aa1.43□□□□□ -2.18
HMGB1P10-201ENST00000395823 PKHD1P08F94 4074 aa1.42□□□□□ -2.18
HMGB1P10-201ENST00000395823 A0A0D9SG42 100 aa1.42□□□□□ -2.18
HMGB1P10-201ENST00000395823 KRTAP20-1Q3LI63 56 aa1.42□□□□□ -2.18
HMGB1P10-201ENST00000395823 ARHGAP5-AS1Q96IT6 56 aa1.42□□□□□ -2.18
HMGB1P10-201ENST00000395823 SRRM2Q9UQ35 2752 aaKnown RBP1.42□□□□□ -2.18
HMGB1P10-201ENST00000395823 WNK2Q9Y3S1 2297 aa1.41□□□□□ -2.18
HMGB1P10-201ENST00000395823 KRTAP5-8O75690 187 aa1.41□□□□□ -2.18
HMGB1P10-201ENST00000395823 RPS27P42677 84 aaKnown RBP1.41□□□□□ -2.18
HMGB1P10-201ENST00000395823 LELP1Q5T871 98 aa1.41□□□□□ -2.18
HMGB1P10-201ENST00000395823 WFDC10BQ8IUB3 73 aa1.41□□□□□ -2.18
HMGB1P10-201ENST00000395823 TTTY10Q9BZA0 68 aa1.41□□□□□ -2.18
HMGB1P10-201ENST00000395823 Q9Y3F1 56 aa1.41□□□□□ -2.18
HMGB1P10-201ENST00000395823 SSPOA2VEC9 5147 aa1.4□□□□□ -2.19
HMGB1P10-201ENST00000395823 MYCBP2O75592 4640 aa1.4□□□□□ -2.19
HMGB1P10-201ENST00000395823 WT1-ASQ06250 92 aa1.4□□□□□ -2.19
HMGB1P10-201ENST00000395823 DEFB109BQ30KR1 87 aa1.4□□□□□ -2.19
HMGB1P10-201ENST00000395823 DNAH9Q9NYC9 4486 aa1.4□□□□□ -2.19
HMGB1P10-201ENST00000395823 HSPG2P98160 4391 aa1.39□□□□□ -2.19
HMGB1P10-201ENST00000395823 USF3Q68DE3 2245 aa1.39□□□□□ -2.19
HMGB1P10-201ENST00000395823 IGLV5-48A0A075B6I7 105 aa1.39□□□□□ -2.19
HMGB1P10-201ENST00000395823 DEFB131AP59861 70 aa1.39□□□□□ -2.19
HMGB1P10-201ENST00000395823 DYNC1H1Q14204 4646 aaKnown RBP1.39□□□□□ -2.19
HMGB1P10-201ENST00000395823 SYNE2Q8WXH0 6885 aaKnown RBP1.38□□□□□ -2.19
HMGB1P10-201ENST00000395823 PLCE1Q9P212 2302 aa1.38□□□□□ -2.19
HMGB1P10-201ENST00000395823 ALMS1Q8TCU4 4167 aa1.38□□□□□ -2.19
HMGB1P10-201ENST00000395823 PLECQ15149 4684 aaKnown RBP1.38□□□□□ -2.19
HMGB1P10-201ENST00000395823 HUWE1Q7Z6Z7 4374 aaKnown RBP1.38□□□□□ -2.19
HMGB1P10-201ENST00000395823 FAT2Q9NYQ8 4349 aa1.37□□□□□ -2.19
HMGB1P10-201ENST00000395823 DNAH7Q8WXX0 4024 aa1.36□□□□□ -2.19
HMGB1P10-201ENST00000395823 H3BSH0 61 aa1.36□□□□□ -2.19
HMGB1P10-201ENST00000395823 KAAG1Q9UBP8 84 aa1.36□□□□□ -2.19
HMGB1P10-201ENST00000395823 DNAH10Q8IVF4 4471 aa1.36□□□□□ -2.19
HMGB1P10-201ENST00000395823 LRP2P98164 4655 aa1.35□□□□□ -2.19
HMGB1P10-201ENST00000395823 CD52P31358 61 aa1.35□□□□□ -2.19
HMGB1P10-201ENST00000395823 STARD9Q9P2P6 4700 aa1.34□□□□□ -2.19
HMGB1P10-201ENST00000395823 POLR2KP53803 58 aaKnown RBP1.34□□□□□ -2.19
HMGB1P10-201ENST00000395823 KLK9Q2XQG4 91 aa1.34□□□□□ -2.19
HMGB1P10-201ENST00000395823 MACF1Q9UPN3 7388 aaKnown RBP1.33□□□□□ -2.2
HMGB1P10-201ENST00000395823 FAT1Q14517 4588 aa1.33□□□□□ -2.2
HMGB1P10-201ENST00000395823 DNAH11Q96DT5 4516 aa1.32□□□□□ -2.2
HMGB1P10-201ENST00000395823 NOP10Q9NPE3 64 aaKnown RBP1.31□□□□□ -2.2
HMGB1P10-201ENST00000395823 PRLHP81277 87 aa1.3□□□□□ -2.2
HMGB1P10-201ENST00000395823 PRCDQ00LT1 54 aa1.3□□□□□ -2.2
HMGB1P10-201ENST00000395823 COX14Q96I36 57 aa1.3□□□□□ -2.2
HMGB1P10-201ENST00000395823 S4R3F8 94 aa1.29□□□□□ -2.2
HMGB1P10-201ENST00000395823 PKHD1L1Q86WI1 4243 aa1.29□□□□□ -2.2
HMGB1P10-201ENST00000395823 RPL39P62891 51 aaKnown RBP1.28□□□□□ -2.2
HMGB1P10-201ENST00000395823 FAT3Q8TDW7 4589 aa1.28□□□□□ -2.2
HMGB1P10-201ENST00000395823 APOBP04114 4563 aaKnown RBP1.28□□□□□ -2.21
HMGB1P10-201ENST00000395823 VPS13DQ5THJ4 4388 aa1.27□□□□□ -2.21
HMGB1P10-201ENST00000395823 MMP24-AS1A0A0U1RRL7 71 aa1.27□□□□□ -2.21
HMGB1P10-201ENST00000395823 KMT2DO14686 5537 aa1.26□□□□□ -2.21
HMGB1P10-201ENST00000395823 HRNRQ86YZ3 2850 aaPredicted RBP1.26□□□□□ -2.21
HMGB1P10-201ENST00000395823 LRP1BQ9NZR2 4599 aa1.26□□□□□ -2.21
HMGB1P10-201ENST00000395823 STATHP02808 62 aa1.26□□□□□ -2.21
HMGB1P10-201ENST00000395823 DNAH3Q8TD57 4116 aa1.25□□□□□ -2.21
HMGB1P10-201ENST00000395823 AHNAK2Q8IVF2 5795 aa1.25□□□□□ -2.21
HMGB1P10-201ENST00000395823 H0YGG7 62 aa1.25□□□□□ -2.21
HMGB1P10-201ENST00000395823 TMEM167AQ8TBQ9 72 aa1.25□□□□□ -2.21
HMGB1P10-201ENST00000395823 DNAH6Q9C0G6 4158 aa1.25□□□□□ -2.21
HMGB1P10-201ENST00000395823 RPL39P5Q59GN2 51 aa1.24□□□□□ -2.21
HMGB1P10-201ENST00000395823 RPL39LQ96EH5 51 aaKnown RBP1.24□□□□□ -2.21
HMGB1P10-201ENST00000395823 KRTAP4-1Q9BYQ7 146 aa1.24□□□□□ -2.21
HMGB1P10-201ENST00000395823 DNAH5Q8TE73 4624 aa1.24□□□□□ -2.21
HMGB1P10-201ENST00000395823 MUC12Q9UKN1 5478 aa1.23□□□□□ -2.21
HMGB1P10-201ENST00000395823 U3KQA8 63 aa1.23□□□□□ -2.21
HMGB1P10-201ENST00000395823 USH2AO75445 5202 aa1.23□□□□□ -2.21
HMGB1P10-201ENST00000395823 DNAH2Q9P225 4427 aa1.23□□□□□ -2.21
HMGB1P10-201ENST00000395823 VPS13BQ7Z7G8 4022 aa1.23□□□□□ -2.21
HMGB1P10-201ENST00000395823 LRP1Q07954 4544 aaKnown RBP1.22□□□□□ -2.21
HMGB1P10-201ENST00000395823 M0QY20 66 aa1.22□□□□□ -2.21
HMGB1P10-201ENST00000395823 KRTAP2-3P0C7H8 128 aa1.22□□□□□ -2.21
HMGB1P10-201ENST00000395823 KRTAP2-4Q9BYR9 128 aa1.22□□□□□ -2.21
HMGB1P10-201ENST00000395823 FCGBPQ9Y6R7 5405 aaPredicted RBP1.22□□□□□ -2.21
HMGB1P10-201ENST00000395823 DEFB108AA8MXU0 73 aa1.21□□□□□ -2.22
HMGB1P10-201ENST00000395823 K7EIM0 57 aa1.21□□□□□ -2.22
HMGB1P10-201ENST00000395823 A8MTW9 85 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms