RNA–Protein interactions for RNA: ENST00000395812.6

CAST-206, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-206ENST00000395812 KRTAP13-4Q3LI77 160 aa5.83□□□□□ -1.48
CAST-206ENST00000395812 KRTAP12-2P59991 146 aa5.82□□□□□ -1.48
CAST-206ENST00000395812 KRTAP12-1P59990 96 aa5.81□□□□□ -1.48
CAST-206ENST00000395812 DYNC1H1Q14204 4646 aaKnown RBP5.8□□□□□ -1.48
CAST-206ENST00000395812 KIAA1109Q2LD37 5005 aa5.8□□□□□ -1.48
CAST-206ENST00000395812 KRTAP10-6P60371 365 aaPredicted RBP5.75□□□□□ -1.49
CAST-206ENST00000395812 PRKDCP78527 4128 aaKnown RBP5.73□□□□□ -1.49
CAST-206ENST00000395812 FAT1Q14517 4588 aa5.72□□□□□ -1.49
CAST-206ENST00000395812 STARD9Q9P2P6 4700 aa5.7□□□□□ -1.5
CAST-206ENST00000395812 RYR3Q15413 4870 aa5.7□□□□□ -1.5
CAST-206ENST00000395812 LRP1BQ9NZR2 4599 aa5.69□□□□□ -1.5
CAST-206ENST00000395812 VPS13DQ5THJ4 4388 aa5.67□□□□□ -1.5
CAST-206ENST00000395812 KMT2AQ03164 3969 aa5.67□□□□□ -1.5
CAST-206ENST00000395812 KRTAP3-3Q9BYR6 98 aa5.66□□□□□ -1.5
CAST-206ENST00000395812 MT1HP80294 61 aa5.66□□□□□ -1.5
CAST-206ENST00000395812 DNAH8Q96JB1 4490 aa5.65□□□□□ -1.51
CAST-206ENST00000395812 KRTAP4-1Q9BYQ7 146 aa5.65□□□□□ -1.51
CAST-206ENST00000395812 KRTAP10-12P60413 245 aa5.64□□□□□ -1.51
CAST-206ENST00000395812 BIRC6Q9NR09 4857 aa5.63□□□□□ -1.51
CAST-206ENST00000395812 MYCBP2O75592 4640 aa5.63□□□□□ -1.51
CAST-206ENST00000395812 KRTAP15-1Q3LI76 137 aa5.61□□□□□ -1.51
CAST-206ENST00000395812 SACSQ9NZJ4 4579 aa5.58□□□□□ -1.52
CAST-206ENST00000395812 KRTAP3-2Q9BYR7 98 aa5.57□□□□□ -1.52
CAST-206ENST00000395812 LORP23490 312 aaPredicted RBP5.56□□□□□ -1.52
CAST-206ENST00000395812 DNAH7Q8WXX0 4024 aa5.56□□□□□ -1.52
CAST-206ENST00000395812 HERC2O95714 4834 aa5.54□□□□□ -1.52
CAST-206ENST00000395812 KRTAP8-1Q8IUC2 63 aa5.53□□□□□ -1.52
CAST-206ENST00000395812 FAT2Q9NYQ8 4349 aa5.52□□□□□ -1.53
CAST-206ENST00000395812 KRTAP17-1Q9BYP8 105 aa5.52□□□□□ -1.53
CAST-206ENST00000395812 DNAH17Q9UFH2 4485 aa5.52□□□□□ -1.53
CAST-206ENST00000395812 FRAS1Q86XX4 4008 aa5.51□□□□□ -1.53
CAST-206ENST00000395812 MT2AP02795 61 aa5.51□□□□□ -1.53
CAST-206ENST00000395812 FAT3Q8TDW7 4589 aa5.51□□□□□ -1.53
CAST-206ENST00000395812 DNAH6Q9C0G6 4158 aa5.45□□□□□ -1.54
CAST-206ENST00000395812 DYNC2H1Q8NCM8 4307 aaKnown RBP5.42□□□□□ -1.54
CAST-206ENST00000395812 CMYA5Q8N3K9 4069 aa5.42□□□□□ -1.54
CAST-206ENST00000395812 CRCT1Q9UGL9 99 aa5.42□□□□□ -1.54
CAST-206ENST00000395812 RYR2Q92736 4967 aa5.41□□□□□ -1.54
CAST-206ENST00000395812 HYDINQ4G0P3 5121 aa5.4□□□□□ -1.54
CAST-206ENST00000395812 DNAH2Q9P225 4427 aa5.4□□□□□ -1.54
CAST-206ENST00000395812 VPS13BQ7Z7G8 4022 aa5.4□□□□□ -1.55
CAST-206ENST00000395812 KRTAP12-3P60328 96 aa5.38□□□□□ -1.55
CAST-206ENST00000395812 LRP1Q07954 4544 aaKnown RBP5.38□□□□□ -1.55
CAST-206ENST00000395812 MT1FP04733 61 aa5.37□□□□□ -1.55
CAST-206ENST00000395812 PCLOQ9Y6V0 5065 aa5.35□□□□□ -1.55
CAST-206ENST00000395812 APOBP04114 4563 aaKnown RBP5.32□□□□□ -1.56
CAST-206ENST00000395812 PKHD1P08F94 4074 aa5.32□□□□□ -1.56
CAST-206ENST00000395812 SPRR2GQ9BYE4 73 aa5.31□□□□□ -1.56
CAST-206ENST00000395812 SPRR2FQ96RM1 72 aa5.25□□□□□ -1.57
CAST-206ENST00000395812 LCE3AQ5TA76 89 aa5.25□□□□□ -1.57
CAST-206ENST00000395812 KRTAP23-1A1A580 65 aa5.21□□□□□ -1.58
CAST-206ENST00000395812 HECTD4Q9Y4D8 3996 aa5.21□□□□□ -1.58
CAST-206ENST00000395812 DNAH3Q8TD57 4116 aa5.2□□□□□ -1.58
CAST-206ENST00000395812 KMT2CQ8NEZ4 4911 aaKnown RBP5.19□□□□□ -1.58
CAST-206ENST00000395812 HERC1Q15751 4861 aa5.18□□□□□ -1.58
CAST-206ENST00000395812 LRP2P98164 4655 aa5.15□□□□□ -1.58
CAST-206ENST00000395812 EPPK1P58107 5090 aaKnown RBP5.13□□□□□ -1.59
CAST-206ENST00000395812 KRTAP10-7P60409 375 aaPredicted RBP5.04□□□□□ -1.6
CAST-206ENST00000395812 HSPG2P98160 4391 aa5.04□□□□□ -1.6
CAST-206ENST00000395812 KRTAP19-8Q3LI54 63 aa5.04□□□□□ -1.6
CAST-206ENST00000395812 ABCA13Q86UQ4 5058 aa5.02□□□□□ -1.61
CAST-206ENST00000395812 PKD1P98161 4303 aa5.01□□□□□ -1.61
CAST-206ENST00000395812 KRTAP9-8Q9BYQ0 159 aa5.01□□□□□ -1.61
CAST-206ENST00000395812 LCE2CQ5TA81 110 aa5□□□□□ -1.61
CAST-206ENST00000395812 KRTAP19-1Q8IUB9 90 aa5□□□□□ -1.61
CAST-206ENST00000395812 SPRR2EP22531 72 aa4.99□□□□□ -1.61
CAST-206ENST00000395812 SPRR2BP35325 72 aa4.99□□□□□ -1.61
CAST-206ENST00000395812 SPRR2AP35326 72 aa4.99□□□□□ -1.61
CAST-206ENST00000395812 KRTAP10-5P60370 271 aa4.98□□□□□ -1.61
CAST-206ENST00000395812 KRTAP9-2Q9BYQ4 174 aa4.97□□□□□ -1.61
CAST-206ENST00000395812 UBR4Q5T4S7 5183 aa4.97□□□□□ -1.61
CAST-206ENST00000395812 LPAP08519 4548 aa4.94□□□□□ -1.62
CAST-206ENST00000395812 PKHD1L1Q86WI1 4243 aa4.92□□□□□ -1.62
CAST-206ENST00000395812 KRTAP9-3Q9BYQ3 159 aa4.91□□□□□ -1.62
CAST-206ENST00000395812 KRTAP19-5Q3LI72 72 aa4.88□□□□□ -1.63
CAST-206ENST00000395812 MUC2Q02817 5179 aa4.86□□□□□ -1.63
CAST-206ENST00000395812 MT1BP07438 61 aa4.85□□□□□ -1.63
CAST-206ENST00000395812 KRTAP19-4Q3LI73 84 aa4.84□□□□□ -1.63
CAST-206ENST00000395812 SPRR2DP22532 72 aa4.84□□□□□ -1.63
CAST-206ENST00000395812 KRTAP9-6A0A140TA67 174 aa4.82□□□□□ -1.64
CAST-206ENST00000395812 LCE2BO14633 110 aa4.79□□□□□ -1.64
CAST-206ENST00000395812 RNF213Q63HN8 5207 aa4.77□□□□□ -1.65
CAST-206ENST00000395812 MT1XP80297 61 aa4.77□□□□□ -1.65
CAST-206ENST00000395812 KRTAP19-2Q3LHN2 52 aa4.76□□□□□ -1.65
CAST-206ENST00000395812 LCE2DQ5TA82 110 aaPredicted RBP4.76□□□□□ -1.65
CAST-206ENST00000395812 FSIP2Q5CZC0 6907 aa4.75□□□□□ -1.65
CAST-206ENST00000395812 LCE2AQ5TA79 106 aaPredicted RBP4.75□□□□□ -1.65
CAST-206ENST00000395812 FAT4Q6V0I7 4981 aa4.68□□□□□ -1.66
CAST-206ENST00000395812 LCE3CQ5T5A8 94 aa4.65□□□□□ -1.67
CAST-206ENST00000395812 MT1GP13640 62 aa4.65□□□□□ -1.67
CAST-206ENST00000395812 KRTAP19-6Q3LI70 58 aa4.64□□□□□ -1.67
CAST-206ENST00000395812 KRTAP4-8A0A0G2JLE6 195 aa4.62□□□□□ -1.67
CAST-206ENST00000395812 KRTAP4-8Q9BYQ9 185 aa4.62□□□□□ -1.67
CAST-206ENST00000395812 KRTAP12-4P60329 112 aa4.62□□□□□ -1.67
CAST-206ENST00000395812 INE1O15225 51 aa4.6□□□□□ -1.67
CAST-206ENST00000395812 SYNE1Q8NF91 8797 aaKnown RBP4.56□□□□□ -1.68
CAST-206ENST00000395812 MUC17Q685J3 4493 aa4.55□□□□□ -1.68
CAST-206ENST00000395812 HMCN2Q8NDA2 5059 aa4.54□□□□□ -1.68
CAST-206ENST00000395812 OBSCNQ5VST9 7968 aa4.54□□□□□ -1.68
CAST-206ENST00000395812 KRTAP9-7A8MTY7 169 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms