RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 A6NN06 94 aa6.16□□□□□ -1.42
SCAF11-203ENST00000395453 C1orf64Q8NEQ6 169 aa6.15□□□□□ -1.43
SCAF11-203ENST00000395453 S4R3F8 94 aa6.15□□□□□ -1.43
SCAF11-203ENST00000395453 MDN1Q9NU22 5596 aa6.14□□□□□ -1.43
SCAF11-203ENST00000395453 TP53AIP1Q9HCN2 124 aa6.14□□□□□ -1.43
SCAF11-203ENST00000395453 CSAG1Q6PB30 78 aa6.13□□□□□ -1.43
SCAF11-203ENST00000395453 KRTAP5-9P26371 169 aa6.12□□□□□ -1.43
SCAF11-203ENST00000395453 LCA10Q71F78 164 aa6.12□□□□□ -1.43
SCAF11-203ENST00000395453 KMT2DO14686 5537 aa6.1□□□□□ -1.43
SCAF11-203ENST00000395453 FAM236AA0A1B0GUQ0 79 aa6.1□□□□□ -1.43
SCAF11-203ENST00000395453 FAM236BA0A1B0GV22 79 aa6.1□□□□□ -1.43
SCAF11-203ENST00000395453 MT1BP07438 61 aa6.1□□□□□ -1.43
SCAF11-203ENST00000395453 SPRR2GQ9BYE4 73 aa6.1□□□□□ -1.43
SCAF11-203ENST00000395453 KRTAP2-3P0C7H8 128 aa6.09□□□□□ -1.43
SCAF11-203ENST00000395453 KRTAP2-4Q9BYR9 128 aa6.09□□□□□ -1.43
SCAF11-203ENST00000395453 F8W1H4 67 aa6.08□□□□□ -1.44
SCAF11-203ENST00000395453 KRTAP19-8Q3LI54 63 aa6.08□□□□□ -1.44
SCAF11-203ENST00000395453 GTF2H5Q6ZYL4 71 aa6.07□□□□□ -1.44
SCAF11-203ENST00000395453 ETDBQ3ZM63 59 aa6.05□□□□□ -1.44
SCAF11-203ENST00000395453 Q5VV11 94 aa6.05□□□□□ -1.44
SCAF11-203ENST00000395453 CYP4F30PQ9H0H9 118 aa6.05□□□□□ -1.44
SCAF11-203ENST00000395453 KLKP1Q107X0 134 aa6.02□□□□□ -1.45
SCAF11-203ENST00000395453 A0A087WVE0 104 aa5.98□□□□□ -1.45
SCAF11-203ENST00000395453 TRAV22A0A0B4J277 110 aa5.98□□□□□ -1.45
SCAF11-203ENST00000395453 KRTAP10-5P60370 271 aa5.98□□□□□ -1.45
SCAF11-203ENST00000395453 LOC101927531A0A1B0GV80 90 aa5.97□□□□□ -1.45
SCAF11-203ENST00000395453 ACYP1P07311 99 aa5.95□□□□□ -1.46
SCAF11-203ENST00000395453 CRIPTQ9P021 101 aa5.94□□□□□ -1.46
SCAF11-203ENST00000395453 PCP4L1A6NKN8 68 aa5.92□□□□□ -1.46
SCAF11-203ENST00000395453 FAM240AA0A1B0GVK7 77 aa5.91□□□□□ -1.46
SCAF11-203ENST00000395453 UQCRQO14949 82 aa5.9□□□□□ -1.47
SCAF11-203ENST00000395453 ATP5EP2Q5VTU8 51 aa5.9□□□□□ -1.47
SCAF11-203ENST00000395453 IMUPQ9GZP8 106 aa5.9□□□□□ -1.47
SCAF11-203ENST00000395453 H0YAA0 97 aa5.88□□□□□ -1.47
SCAF11-203ENST00000395453 H0Y9P7 68 aa5.87□□□□□ -1.47
SCAF11-203ENST00000395453 ATOX1O00244 68 aa5.87□□□□□ -1.47
SCAF11-203ENST00000395453 KRTAP2-2Q9BYT5 123 aa5.87□□□□□ -1.47
SCAF11-203ENST00000395453 KRTAP2-1Q9BYU5 128 aa5.87□□□□□ -1.47
SCAF11-203ENST00000395453 NDUFC1O43677 76 aa5.86□□□□□ -1.47
SCAF11-203ENST00000395453 SPRR2EP22531 72 aa5.86□□□□□ -1.47
SCAF11-203ENST00000395453 SPRR2BP35325 72 aa5.86□□□□□ -1.47
SCAF11-203ENST00000395453 SPRR2AP35326 72 aa5.86□□□□□ -1.47
SCAF11-203ENST00000395453 HIST1H4AP62805 103 aaKnown RBP5.86□□□□□ -1.47
SCAF11-203ENST00000395453 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.84□□□□□ -1.47
SCAF11-203ENST00000395453 A8MUN3 132 aa5.82□□□□□ -1.48
SCAF11-203ENST00000395453 LCE1AQ5T7P2 110 aa5.82□□□□□ -1.48
SCAF11-203ENST00000395453 SPRR2FQ96RM1 72 aa5.82□□□□□ -1.48
SCAF11-203ENST00000395453 LINC00643Q86TS7 51 aa5.78□□□□□ -1.48
SCAF11-203ENST00000395453 LINC00208Q96KT6 92 aa5.77□□□□□ -1.49
SCAF11-203ENST00000395453 ADM2Q7Z4H4 148 aa5.76□□□□□ -1.49
SCAF11-203ENST00000395453 OCR1Q9BZK8 76 aa5.75□□□□□ -1.49
SCAF11-203ENST00000395453 KRTAP10-7P60409 375 aaPredicted RBP5.73□□□□□ -1.49
SCAF11-203ENST00000395453 MP68P56378 58 aa5.71□□□□□ -1.5
SCAF11-203ENST00000395453 MT1XP80297 61 aa5.69□□□□□ -1.5
SCAF11-203ENST00000395453 PRO2289Q9P1D8 64 aa5.68□□□□□ -1.5
SCAF11-203ENST00000395453 SPRR2DP22532 72 aa5.67□□□□□ -1.5
SCAF11-203ENST00000395453 KRTAP5-11Q6L8G4 156 aa5.67□□□□□ -1.5
SCAF11-203ENST00000395453 GPR98Q8WXG9 6306 aa5.65□□□□□ -1.5
SCAF11-203ENST00000395453 H3BPC8 53 aa5.65□□□□□ -1.51
SCAF11-203ENST00000395453 KRTAP8-1Q8IUC2 63 aa5.65□□□□□ -1.51
SCAF11-203ENST00000395453 PLAC4Q8WY50 150 aa5.65□□□□□ -1.51
SCAF11-203ENST00000395453 P0C880 135 aa5.64□□□□□ -1.51
SCAF11-203ENST00000395453 R4GN34 69 aa5.63□□□□□ -1.51
SCAF11-203ENST00000395453 DMAC1Q96GE9 116 aa5.62□□□□□ -1.51
SCAF11-203ENST00000395453 C20orf197Q8N268 126 aa5.61□□□□□ -1.51
SCAF11-203ENST00000395453 A0A1B0GV90 55 aa5.6□□□□□ -1.51
SCAF11-203ENST00000395453 KRTAP12-2P59991 146 aa5.58□□□□□ -1.52
SCAF11-203ENST00000395453 M0QZ58 72 aa5.57□□□□□ -1.52
SCAF11-203ENST00000395453 J3QR89 54 aa5.53□□□□□ -1.52
SCAF11-203ENST00000395453 SCGB1A1P11684 91 aa5.53□□□□□ -1.52
SCAF11-203ENST00000395453 TRAV7A0A075B6U4 112 aa5.5□□□□□ -1.53
SCAF11-203ENST00000395453 LINC01554Q52M75 96 aa5.48□□□□□ -1.53
SCAF11-203ENST00000395453 ACYP2P14621 99 aa5.46□□□□□ -1.54
SCAF11-203ENST00000395453 KRTAP10-12P60413 245 aa5.42□□□□□ -1.54
SCAF11-203ENST00000395453 LCE1EQ5T753 118 aa5.42□□□□□ -1.54
SCAF11-203ENST00000395453 DSTQ03001 7570 aaKnown RBP5.4□□□□□ -1.54
SCAF11-203ENST00000395453 SPTSSBQ8NFR3 76 aa5.39□□□□□ -1.55
SCAF11-203ENST00000395453 SMIM20Q8N5G0 67 aa5.38□□□□□ -1.55
SCAF11-203ENST00000395453 MT-ATP8P03928 68 aa5.37□□□□□ -1.55
SCAF11-203ENST00000395453 CHKB-CPT1BH3BT56 60 aa5.3□□□□□ -1.56
SCAF11-203ENST00000395453 K7ERU9 68 aa5.27□□□□□ -1.57
SCAF11-203ENST00000395453 SNURFQ9Y675 71 aa5.27□□□□□ -1.57
SCAF11-203ENST00000395453 SPANXA2-OT1Q8N9U9 137 aa5.25□□□□□ -1.57
SCAF11-203ENST00000395453 KRTAP13-4Q3LI77 160 aa5.23□□□□□ -1.57
SCAF11-203ENST00000395453 SERP2Q8N6R1 65 aa5.17□□□□□ -1.58
SCAF11-203ENST00000395453 CAMK2N1Q7Z7J9 78 aa5.14□□□□□ -1.59
SCAF11-203ENST00000395453 KRTAP19-7Q3SYF9 63 aa5.09□□□□□ -1.59
SCAF11-203ENST00000395453 COA5Q86WW8 74 aa5.09□□□□□ -1.59
SCAF11-203ENST00000395453 HMCN1Q96RW7 5635 aa5.06□□□□□ -1.6
SCAF11-203ENST00000395453 AHNAK2Q8IVF2 5795 aa5.05□□□□□ -1.6
SCAF11-203ENST00000395453 MT1EP04732 61 aa5.04□□□□□ -1.6
SCAF11-203ENST00000395453 SERP1Q9Y6X1 66 aa5.03□□□□□ -1.6
SCAF11-203ENST00000395453 SEC61GP60059 68 aa5.02□□□□□ -1.61
SCAF11-203ENST00000395453 A0A0D9SG42 100 aa5.01□□□□□ -1.61
SCAF11-203ENST00000395453 KRTAP5-1Q6L8H4 278 aa5.01□□□□□ -1.61
SCAF11-203ENST00000395453 KRTAP19-3Q7Z4W3 81 aa5.01□□□□□ -1.61
SCAF11-203ENST00000395453 KRTAP5-10Q6L8G5 202 aa5□□□□□ -1.61
SCAF11-203ENST00000395453 SPATA8Q6RVD6 105 aa5□□□□□ -1.61
SCAF11-203ENST00000395453 MT4P47944 62 aa4.99□□□□□ -1.61
SCAF11-203ENST00000395453 A0A1B0GU33 70 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms