RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 LCE1AQ5T7P2 110 aa3.97□□□□□ -1.77
RTN4-205ENST00000394609 SPAG11AQ6PDA7 123 aa3.96□□□□□ -1.77
RTN4-205ENST00000394609 IGHV6-1A0A0B4J1U7 121 aa3.96□□□□□ -1.78
RTN4-205ENST00000394609 LINC00304Q8N9R0 145 aa3.96□□□□□ -1.78
RTN4-205ENST00000394609 FLG2Q5D862 2391 aaPredicted RBP3.95□□□□□ -1.78
RTN4-205ENST00000394609 A0A1B0GVX0 72 aa3.95□□□□□ -1.78
RTN4-205ENST00000394609 SPINK1P00995 79 aa3.95□□□□□ -1.78
RTN4-205ENST00000394609 MRPL34Q9BQ48 92 aaKnown RBP3.95□□□□□ -1.78
RTN4-205ENST00000394609 SPINK7P58062 85 aa3.94□□□□□ -1.78
RTN4-205ENST00000394609 NOTCH2NLQ7Z3S9 236 aa3.94□□□□□ -1.78
RTN4-205ENST00000394609 RYR1P21817 5038 aa3.94□□□□□ -1.78
RTN4-205ENST00000394609 ACYP2P14621 99 aa3.94□□□□□ -1.78
RTN4-205ENST00000394609 PCOTHQ58A44 107 aa3.94□□□□□ -1.78
RTN4-205ENST00000394609 LRP1Q07954 4544 aaKnown RBP3.93□□□□□ -1.78
RTN4-205ENST00000394609 C8orf87E5RJ46 101 aa3.91□□□□□ -1.78
RTN4-205ENST00000394609 KRTAP13-3Q3SY46 172 aa3.91□□□□□ -1.78
RTN4-205ENST00000394609 LINC00313P59037 77 aa3.9□□□□□ -1.78
RTN4-205ENST00000394609 SPATA8Q6RVD6 105 aa3.9□□□□□ -1.78
RTN4-205ENST00000394609 DMAC1Q96GE9 116 aa3.9□□□□□ -1.78
RTN4-205ENST00000394609 KRTAP10-8P60410 259 aa3.9□□□□□ -1.79
RTN4-205ENST00000394609 PKHD1L1Q86WI1 4243 aa3.89□□□□□ -1.79
RTN4-205ENST00000394609 DMBT1Q9UGM3 2413 aaPredicted RBP3.89□□□□□ -1.79
RTN4-205ENST00000394609 RETNLBQ9BQ08 111 aa3.89□□□□□ -1.79
RTN4-205ENST00000394609 RPS29P62273 56 aaKnown RBP3.88□□□□□ -1.79
RTN4-205ENST00000394609 LINC01554Q52M75 96 aa3.88□□□□□ -1.79
RTN4-205ENST00000394609 MYCBP2O75592 4640 aa3.88□□□□□ -1.79
RTN4-205ENST00000394609 A0A1B0GU69 56 aa3.86□□□□□ -1.79
RTN4-205ENST00000394609 UQCR11O14957 56 aa3.86□□□□□ -1.79
RTN4-205ENST00000394609 TNXBP22105 4242 aa3.85□□□□□ -1.79
RTN4-205ENST00000394609 MT1HL1P0DM35 61 aa3.85□□□□□ -1.79
RTN4-205ENST00000394609 IGKV2-30P06310 120 aa3.84□□□□□ -1.79
RTN4-205ENST00000394609 C9orf92A6NGG3 77 aa3.84□□□□□ -1.8
RTN4-205ENST00000394609 KRTAP16-1A8MUX0 517 aa3.84□□□□□ -1.8
RTN4-205ENST00000394609 KRTAP10-7P60409 375 aaPredicted RBP3.84□□□□□ -1.8
RTN4-205ENST00000394609 FAT3Q8TDW7 4589 aa3.83□□□□□ -1.8
RTN4-205ENST00000394609 MIR22HGQ0VDD5 57 aa3.82□□□□□ -1.8
RTN4-205ENST00000394609 Q5W150 140 aa3.82□□□□□ -1.8
RTN4-205ENST00000394609 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.81□□□□□ -1.8
RTN4-205ENST00000394609 PRAC1Q96KF2 57 aa3.79□□□□□ -1.8
RTN4-205ENST00000394609 KRTAP10-6P60371 365 aaPredicted RBP3.77□□□□□ -1.81
RTN4-205ENST00000394609 BIRC6Q9NR09 4857 aa3.76□□□□□ -1.81
RTN4-205ENST00000394609 ABCA13Q86UQ4 5058 aa3.75□□□□□ -1.81
RTN4-205ENST00000394609 ADM2Q7Z4H4 148 aa3.75□□□□□ -1.81
RTN4-205ENST00000394609 IGKV2D-30A0A075B6S6 120 aa3.74□□□□□ -1.81
RTN4-205ENST00000394609 C20orf166-AS1Q96NR2 134 aa3.74□□□□□ -1.81
RTN4-205ENST00000394609 HERC2O95714 4834 aa3.74□□□□□ -1.81
RTN4-205ENST00000394609 A8MUU9 505 aa3.73□□□□□ -1.81
RTN4-205ENST00000394609 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
RTN4-205ENST00000394609 KRTAP2-2Q9BYT5 123 aa3.73□□□□□ -1.81
RTN4-205ENST00000394609 A0A0A0MQY5 61 aa3.71□□□□□ -1.82
RTN4-205ENST00000394609 CSAG1Q6PB30 78 aa3.71□□□□□ -1.82
RTN4-205ENST00000394609 RPL37P61927 97 aaKnown RBP3.67□□□□□ -1.82
RTN4-205ENST00000394609 KRTAP25-1Q3LHN0 102 aa3.67□□□□□ -1.82
RTN4-205ENST00000394609 TPRXLQ17RH7 258 aa3.66□□□□□ -1.82
RTN4-205ENST00000394609 LPAP08519 4548 aa3.66□□□□□ -1.82
RTN4-205ENST00000394609 LCE1EQ5T753 118 aa3.65□□□□□ -1.82
RTN4-205ENST00000394609 PCLOQ9Y6V0 5065 aa3.63□□□□□ -1.83
RTN4-205ENST00000394609 LRP2P98164 4655 aa3.63□□□□□ -1.83
RTN4-205ENST00000394609 ROMO1P60602 79 aa3.62□□□□□ -1.83
RTN4-205ENST00000394609 H0YAA0 97 aa3.61□□□□□ -1.83
RTN4-205ENST00000394609 A0A1B0GU33 70 aa3.6□□□□□ -1.83
RTN4-205ENST00000394609 K7ERS5 55 aa3.6□□□□□ -1.83
RTN4-205ENST00000394609 HERC1Q15751 4861 aa3.59□□□□□ -1.84
RTN4-205ENST00000394609 H1FX-AS1Q4G0G2 97 aa3.58□□□□□ -1.84
RTN4-205ENST00000394609 COX6B2Q6YFQ2 88 aa3.54□□□□□ -1.84
RTN4-205ENST00000394609 SEC61BP60468 96 aaKnown RBP3.54□□□□□ -1.84
RTN4-205ENST00000394609 MT3P25713 68 aa3.52□□□□□ -1.85
RTN4-205ENST00000394609 KRTAP4-1Q9BYQ7 146 aa3.51□□□□□ -1.85
RTN4-205ENST00000394609 HMCN2Q8NDA2 5059 aa3.49□□□□□ -1.85
RTN4-205ENST00000394609 MUC2Q02817 5179 aa3.48□□□□□ -1.85
RTN4-205ENST00000394609 P0C880 135 aa3.46□□□□□ -1.86
RTN4-205ENST00000394609 S4R3F8 94 aa3.43□□□□□ -1.86
RTN4-205ENST00000394609 MUC17Q685J3 4493 aa3.43□□□□□ -1.86
RTN4-205ENST00000394609 UBR4Q5T4S7 5183 aa3.4□□□□□ -1.86
RTN4-205ENST00000394609 KRTAP19-2Q3LHN2 52 aa3.39□□□□□ -1.87
RTN4-205ENST00000394609 SPINT4Q6UDR6 99 aa3.38□□□□□ -1.87
RTN4-205ENST00000394609 CRIPTQ9P021 101 aa3.37□□□□□ -1.87
RTN4-205ENST00000394609 RNF213Q63HN8 5207 aa3.35□□□□□ -1.87
RTN4-205ENST00000394609 KRTAP13-4Q3LI77 160 aa3.32□□□□□ -1.88
RTN4-205ENST00000394609 FAT4Q6V0I7 4981 aa3.31□□□□□ -1.88
RTN4-205ENST00000394609 NDUFAF8A1L188 74 aa3.3□□□□□ -1.88
RTN4-205ENST00000394609 M0QZ58 72 aa3.28□□□□□ -1.88
RTN4-205ENST00000394609 FLGP20930 4061 aaPredicted RBP3.27□□□□□ -1.89
RTN4-205ENST00000394609 KRTAP5-1Q6L8H4 278 aa3.27□□□□□ -1.89
RTN4-205ENST00000394609 A0A0D9SG42 100 aa3.26□□□□□ -1.89
RTN4-205ENST00000394609 KRTAP5-9P26371 169 aa3.26□□□□□ -1.89
RTN4-205ENST00000394609 KRTAP12-1P59990 96 aa3.26□□□□□ -1.89
RTN4-205ENST00000394609 KRTAP10-5P60370 271 aa3.26□□□□□ -1.89
RTN4-205ENST00000394609 KRTAP12-2P59991 146 aa3.24□□□□□ -1.89
RTN4-205ENST00000394609 MT1HP80294 61 aa3.24□□□□□ -1.89
RTN4-205ENST00000394609 C10orf95Q9H7T3 257 aa3.24□□□□□ -1.89
RTN4-205ENST00000394609 M0R2T5 61 aa3.24□□□□□ -1.89
RTN4-205ENST00000394609 KRTAP5-4Q6L8H1 288 aa3.18□□□□□ -1.9
RTN4-205ENST00000394609 R4GN34 69 aa3.18□□□□□ -1.9
RTN4-205ENST00000394609 KRTAP9-6A8MVA2 160 aa3.14□□□□□ -1.91
RTN4-205ENST00000394609 PP632Q6XCG6 107 aa3.14□□□□□ -1.91
RTN4-205ENST00000394609 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
RTN4-205ENST00000394609 PLAC4Q8WY50 150 aa3.13□□□□□ -1.91
RTN4-205ENST00000394609 MT2AP02795 61 aa3.11□□□□□ -1.91
RTN4-205ENST00000394609 KRTAP10-10P60014 251 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms