RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 LIMD2Q9BT23 127 aa3.39□□□□□ -1.87
CASC3-202ENST00000394114 SSBP3-AS1Q7Z2R9 100 aa3.38□□□□□ -1.87
CASC3-202ENST00000394114 WFDC13Q8IUB5 93 aa3.38□□□□□ -1.87
CASC3-202ENST00000394114 Q96NJ1 140 aa3.38□□□□□ -1.87
CASC3-202ENST00000394114 ABCA13Q86UQ4 5058 aa3.38□□□□□ -1.87
CASC3-202ENST00000394114 KRTAP4-7Q9BYR0 210 aa3.37□□□□□ -1.87
CASC3-202ENST00000394114 KRTAP4-5Q9BYR2 181 aa3.36□□□□□ -1.87
CASC3-202ENST00000394114 A8MWP4 228 aa3.36□□□□□ -1.87
CASC3-202ENST00000394114 Q5VSD8 79 aa3.36□□□□□ -1.87
CASC3-202ENST00000394114 DMBT1Q9UGM3 2413 aaPredicted RBP3.35□□□□□ -1.87
CASC3-202ENST00000394114 PKHD1L1Q86WI1 4243 aa3.35□□□□□ -1.87
CASC3-202ENST00000394114 NDUFB1O75438 58 aa3.34□□□□□ -1.87
CASC3-202ENST00000394114 MIR22HGQ0VDD5 57 aa3.34□□□□□ -1.87
CASC3-202ENST00000394114 P0C880 135 aa3.34□□□□□ -1.87
CASC3-202ENST00000394114 K7ERS5 55 aa3.34□□□□□ -1.88
CASC3-202ENST00000394114 KRTAP29-1A8MX34 341 aaPredicted RBP3.33□□□□□ -1.88
CASC3-202ENST00000394114 LINC00304Q8N9R0 145 aa3.33□□□□□ -1.88
CASC3-202ENST00000394114 MMP24-AS1A0A0U1RRL7 71 aa3.32□□□□□ -1.88
CASC3-202ENST00000394114 LOC101927531A0A1B0GV80 90 aa3.32□□□□□ -1.88
CASC3-202ENST00000394114 HERC1Q15751 4861 aa3.32□□□□□ -1.88
CASC3-202ENST00000394114 KRTAP4-9Q9BYQ8 210 aa3.32□□□□□ -1.88
CASC3-202ENST00000394114 SPINK1P00995 79 aa3.31□□□□□ -1.88
CASC3-202ENST00000394114 SPINK7P58062 85 aa3.3□□□□□ -1.88
CASC3-202ENST00000394114 KRTAP9-3Q9BYQ3 159 aa3.3□□□□□ -1.88
CASC3-202ENST00000394114 TNXBP22105 4242 aa3.29□□□□□ -1.88
CASC3-202ENST00000394114 FAT3Q8TDW7 4589 aa3.29□□□□□ -1.88
CASC3-202ENST00000394114 ASB16-AS1Q495Z4 193 aa3.29□□□□□ -1.88
CASC3-202ENST00000394114 SPANXA2-OT1Q8N9U9 137 aa3.29□□□□□ -1.88
CASC3-202ENST00000394114 Q5W150 140 aa3.29□□□□□ -1.88
CASC3-202ENST00000394114 SPAG11AQ6PDA7 123 aa3.28□□□□□ -1.89
CASC3-202ENST00000394114 MRPL34Q9BQ48 92 aaKnown RBP3.27□□□□□ -1.89
CASC3-202ENST00000394114 LINC00208Q96KT6 92 aa3.26□□□□□ -1.89
CASC3-202ENST00000394114 KRTAP4-2Q9BYR5 136 aa3.26□□□□□ -1.89
CASC3-202ENST00000394114 H0Y9P7 68 aa3.25□□□□□ -1.89
CASC3-202ENST00000394114 A8MUU9 505 aa3.25□□□□□ -1.89
CASC3-202ENST00000394114 C9orf92A6NGG3 77 aa3.24□□□□□ -1.89
CASC3-202ENST00000394114 KRTAP10-8P60410 259 aa3.24□□□□□ -1.89
CASC3-202ENST00000394114 C20orf166-AS1Q96NR2 134 aa3.24□□□□□ -1.89
CASC3-202ENST00000394114 RPS29P62273 56 aaKnown RBP3.24□□□□□ -1.89
CASC3-202ENST00000394114 KRTAP4-11Q9BYQ6 195 aa3.24□□□□□ -1.89
CASC3-202ENST00000394114 ZCCHC13Q8WW36 166 aaKnown RBP3.23□□□□□ -1.89
CASC3-202ENST00000394114 TP53AIP1Q9HCN2 124 aa3.22□□□□□ -1.89
CASC3-202ENST00000394114 MT1HL1P0DM35 61 aa3.21□□□□□ -1.9
CASC3-202ENST00000394114 PCOTHQ58A44 107 aa3.2□□□□□ -1.9
CASC3-202ENST00000394114 LINC01558Q9Y6Z2 57 aa3.19□□□□□ -1.9
CASC3-202ENST00000394114 LPAP08519 4548 aa3.19□□□□□ -1.9
CASC3-202ENST00000394114 KRTAP13-3Q3SY46 172 aa3.17□□□□□ -1.9
CASC3-202ENST00000394114 KRTAP25-1Q3LHN0 102 aa3.17□□□□□ -1.9
CASC3-202ENST00000394114 COA5Q86WW8 74 aa3.17□□□□□ -1.9
CASC3-202ENST00000394114 H3BPC8 53 aa3.16□□□□□ -1.9
CASC3-202ENST00000394114 LRP2P98164 4655 aa3.15□□□□□ -1.91
CASC3-202ENST00000394114 MUC2Q02817 5179 aa3.14□□□□□ -1.91
CASC3-202ENST00000394114 SPINT4Q6UDR6 99 aa3.12□□□□□ -1.91
CASC3-202ENST00000394114 KRTAP9-8Q9BYQ0 159 aa3.12□□□□□ -1.91
CASC3-202ENST00000394114 RNF213Q63HN8 5207 aa3.12□□□□□ -1.91
CASC3-202ENST00000394114 HRES1P13985 223 aa3.11□□□□□ -1.91
CASC3-202ENST00000394114 A0A1B0GU33 70 aa3.08□□□□□ -1.92
CASC3-202ENST00000394114 RPL37P61927 97 aaKnown RBP3.08□□□□□ -1.92
CASC3-202ENST00000394114 SPATA8Q6RVD6 105 aa3.07□□□□□ -1.92
CASC3-202ENST00000394114 HMCN2Q8NDA2 5059 aa3.07□□□□□ -1.92
CASC3-202ENST00000394114 LCE1AQ5T7P2 110 aa3.06□□□□□ -1.92
CASC3-202ENST00000394114 TPRXLQ17RH7 258 aa3.06□□□□□ -1.92
CASC3-202ENST00000394114 CRIPTQ9P021 101 aa3.06□□□□□ -1.92
CASC3-202ENST00000394114 KRTAP5-3Q6L8H2 238 aa3.05□□□□□ -1.92
CASC3-202ENST00000394114 DMAC1Q96GE9 116 aa3.05□□□□□ -1.92
CASC3-202ENST00000394114 UQCR11O14957 56 aa3.04□□□□□ -1.92
CASC3-202ENST00000394114 MT3P25713 68 aa3.04□□□□□ -1.92
CASC3-202ENST00000394114 A0A1B0GU69 56 aa3.03□□□□□ -1.92
CASC3-202ENST00000394114 ACYP2P14621 99 aa3.02□□□□□ -1.93
CASC3-202ENST00000394114 FAT4Q6V0I7 4981 aa2.98□□□□□ -1.93
CASC3-202ENST00000394114 COX6B2Q6YFQ2 88 aa2.98□□□□□ -1.93
CASC3-202ENST00000394114 R4GN34 69 aa2.98□□□□□ -1.93
CASC3-202ENST00000394114 MUC17Q685J3 4493 aa2.95□□□□□ -1.94
CASC3-202ENST00000394114 KRTAP4-1Q9BYQ7 146 aa2.95□□□□□ -1.94
CASC3-202ENST00000394114 S4R3F8 94 aa2.89□□□□□ -1.95
CASC3-202ENST00000394114 H1FX-AS1Q4G0G2 97 aa2.89□□□□□ -1.95
CASC3-202ENST00000394114 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
CASC3-202ENST00000394114 CRCT1Q9UGL9 99 aa2.87□□□□□ -1.95
CASC3-202ENST00000394114 FSIP2Q5CZC0 6907 aa2.85□□□□□ -1.95
CASC3-202ENST00000394114 PRO2289Q9P1D8 64 aa2.84□□□□□ -1.95
CASC3-202ENST00000394114 KRTAP19-2Q3LHN2 52 aa2.83□□□□□ -1.96
CASC3-202ENST00000394114 FLGP20930 4061 aaPredicted RBP2.82□□□□□ -1.96
CASC3-202ENST00000394114 KRTAP10-6P60371 365 aaPredicted RBP2.79□□□□□ -1.96
CASC3-202ENST00000394114 C10orf95Q9H7T3 257 aa2.79□□□□□ -1.96
CASC3-202ENST00000394114 H0YAA0 97 aa2.77□□□□□ -1.97
CASC3-202ENST00000394114 KRTAP2-2Q9BYT5 123 aa2.77□□□□□ -1.97
CASC3-202ENST00000394114 KRTAP13-4Q3LI77 160 aa2.75□□□□□ -1.97
CASC3-202ENST00000394114 A0A0D9SG42 100 aa2.73□□□□□ -1.97
CASC3-202ENST00000394114 M0R2T5 61 aa2.73□□□□□ -1.97
CASC3-202ENST00000394114 MT1HP80294 61 aa2.71□□□□□ -1.98
CASC3-202ENST00000394114 M0QZ58 72 aa2.7□□□□□ -1.98
CASC3-202ENST00000394114 USH2AO75445 5202 aa2.67□□□□□ -1.98
CASC3-202ENST00000394114 LCE3CQ5T5A8 94 aa2.64□□□□□ -1.99
CASC3-202ENST00000394114 PLAC4Q8WY50 150 aa2.64□□□□□ -1.99
CASC3-202ENST00000394114 KRTAP12-2P59991 146 aa2.64□□□□□ -1.99
CASC3-202ENST00000394114 HMCN1Q96RW7 5635 aa2.63□□□□□ -1.99
CASC3-202ENST00000394114 KRTAP12-1P59990 96 aa2.62□□□□□ -1.99
CASC3-202ENST00000394114 KRTAP10-12P60413 245 aa2.62□□□□□ -1.99
CASC3-202ENST00000394114 MT2AP02795 61 aa2.61□□□□□ -1.99
CASC3-202ENST00000394114 MT1FP04733 61 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms