RNA–Protein interactions for RNA: ENST00000394053.6

MTHFD2-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD2, Length 4,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-201ENST00000394053 KRTAP12-1P59990 96 aa5.02□□□□□ -1.61
MTHFD2-201ENST00000394053 KRTAP13-4Q3LI77 160 aa5.01□□□□□ -1.61
MTHFD2-201ENST00000394053 PRO2289Q9P1D8 64 aa5.01□□□□□ -1.61
MTHFD2-201ENST00000394053 DYNC1H1Q14204 4646 aaKnown RBP5□□□□□ -1.61
MTHFD2-201ENST00000394053 KRTAP3-3Q9BYR6 98 aa5□□□□□ -1.61
MTHFD2-201ENST00000394053 A0A0A0MQY5 61 aa4.99□□□□□ -1.61
MTHFD2-201ENST00000394053 H3BS24 57 aa4.98□□□□□ -1.61
MTHFD2-201ENST00000394053 LRP1BQ9NZR2 4599 aa4.98□□□□□ -1.61
MTHFD2-201ENST00000394053 KMT2AQ03164 3969 aa4.98□□□□□ -1.61
MTHFD2-201ENST00000394053 DNAH17Q9UFH2 4485 aa4.97□□□□□ -1.61
MTHFD2-201ENST00000394053 RYR1P21817 5038 aa4.95□□□□□ -1.62
MTHFD2-201ENST00000394053 KIAA1109Q2LD37 5005 aa4.95□□□□□ -1.62
MTHFD2-201ENST00000394053 NDUFAF8A1L188 74 aa4.95□□□□□ -1.62
MTHFD2-201ENST00000394053 KRTAP3-2Q9BYR7 98 aa4.93□□□□□ -1.62
MTHFD2-201ENST00000394053 LYSTQ99698 3801 aa4.93□□□□□ -1.62
MTHFD2-201ENST00000394053 DNAH2Q9P225 4427 aa4.92□□□□□ -1.62
MTHFD2-201ENST00000394053 DNAH8Q96JB1 4490 aa4.86□□□□□ -1.63
MTHFD2-201ENST00000394053 DNAH3Q8TD57 4116 aa4.86□□□□□ -1.63
MTHFD2-201ENST00000394053 RYR3Q15413 4870 aa4.83□□□□□ -1.64
MTHFD2-201ENST00000394053 DYNC2H1Q8NCM8 4307 aaKnown RBP4.83□□□□□ -1.64
MTHFD2-201ENST00000394053 FAT2Q9NYQ8 4349 aa4.81□□□□□ -1.64
MTHFD2-201ENST00000394053 LCE2DQ5TA82 110 aaPredicted RBP4.81□□□□□ -1.64
MTHFD2-201ENST00000394053 SACSQ9NZJ4 4579 aa4.8□□□□□ -1.64
MTHFD2-201ENST00000394053 CMYA5Q8N3K9 4069 aa4.79□□□□□ -1.64
MTHFD2-201ENST00000394053 KRTAP4-1Q9BYQ7 146 aa4.78□□□□□ -1.64
MTHFD2-201ENST00000394053 MYCBP2O75592 4640 aa4.78□□□□□ -1.64
MTHFD2-201ENST00000394053 KRTAP17-1Q9BYP8 105 aa4.78□□□□□ -1.65
MTHFD2-201ENST00000394053 VPS13BQ7Z7G8 4022 aa4.77□□□□□ -1.65
MTHFD2-201ENST00000394053 APOBP04114 4563 aaKnown RBP4.74□□□□□ -1.65
MTHFD2-201ENST00000394053 LORP23490 312 aaPredicted RBP4.73□□□□□ -1.65
MTHFD2-201ENST00000394053 LRP1Q07954 4544 aaKnown RBP4.72□□□□□ -1.65
MTHFD2-201ENST00000394053 DNAH7Q8WXX0 4024 aa4.72□□□□□ -1.65
MTHFD2-201ENST00000394053 DNAH6Q9C0G6 4158 aa4.71□□□□□ -1.66
MTHFD2-201ENST00000394053 FAT3Q8TDW7 4589 aa4.7□□□□□ -1.66
MTHFD2-201ENST00000394053 HYDINQ4G0P3 5121 aa4.67□□□□□ -1.66
MTHFD2-201ENST00000394053 RYR2Q92736 4967 aa4.66□□□□□ -1.66
MTHFD2-201ENST00000394053 HECTD4Q9Y4D8 3996 aa4.62□□□□□ -1.67
MTHFD2-201ENST00000394053 PKHD1P08F94 4074 aa4.61□□□□□ -1.67
MTHFD2-201ENST00000394053 FRAS1Q86XX4 4008 aa4.61□□□□□ -1.67
MTHFD2-201ENST00000394053 HERC2O95714 4834 aa4.6□□□□□ -1.67
MTHFD2-201ENST00000394053 KMT2CQ8NEZ4 4911 aaKnown RBP4.59□□□□□ -1.68
MTHFD2-201ENST00000394053 MT1HP80294 61 aa4.57□□□□□ -1.68
MTHFD2-201ENST00000394053 KRTAP10-12P60413 245 aa4.54□□□□□ -1.68
MTHFD2-201ENST00000394053 KRTAP15-1Q3LI76 137 aa4.54□□□□□ -1.68
MTHFD2-201ENST00000394053 LRP2P98164 4655 aa4.51□□□□□ -1.69
MTHFD2-201ENST00000394053 MT2AP02795 61 aa4.49□□□□□ -1.69
MTHFD2-201ENST00000394053 HSPG2P98160 4391 aa4.45□□□□□ -1.7
MTHFD2-201ENST00000394053 BIRC6Q9NR09 4857 aa4.44□□□□□ -1.7
MTHFD2-201ENST00000394053 MT1FP04733 61 aa4.42□□□□□ -1.7
MTHFD2-201ENST00000394053 LCE3AQ5TA76 89 aa4.42□□□□□ -1.7
MTHFD2-201ENST00000394053 KRTAP12-3P60328 96 aa4.41□□□□□ -1.7
MTHFD2-201ENST00000394053 PKD1P98161 4303 aa4.41□□□□□ -1.7
MTHFD2-201ENST00000394053 SPRR2GQ9BYE4 73 aa4.41□□□□□ -1.7
MTHFD2-201ENST00000394053 KRTAP23-1A1A580 65 aa4.36□□□□□ -1.71
MTHFD2-201ENST00000394053 EPPK1P58107 5090 aaKnown RBP4.34□□□□□ -1.71
MTHFD2-201ENST00000394053 PCLOQ9Y6V0 5065 aa4.32□□□□□ -1.72
MTHFD2-201ENST00000394053 LPAP08519 4548 aa4.27□□□□□ -1.73
MTHFD2-201ENST00000394053 KRTAP19-1Q8IUB9 90 aa4.26□□□□□ -1.73
MTHFD2-201ENST00000394053 ABCA13Q86UQ4 5058 aa4.26□□□□□ -1.73
MTHFD2-201ENST00000394053 CRCT1Q9UGL9 99 aa4.25□□□□□ -1.73
MTHFD2-201ENST00000394053 HERC1Q15751 4861 aa4.24□□□□□ -1.73
MTHFD2-201ENST00000394053 KRTAP8-1Q8IUC2 63 aa4.24□□□□□ -1.73
MTHFD2-201ENST00000394053 LCE2CQ5TA81 110 aa4.24□□□□□ -1.73
MTHFD2-201ENST00000394053 KRTAP9-8Q9BYQ0 159 aa4.18□□□□□ -1.74
MTHFD2-201ENST00000394053 KRTAP19-8Q3LI54 63 aa4.16□□□□□ -1.74
MTHFD2-201ENST00000394053 KRTAP19-2Q3LHN2 52 aa4.13□□□□□ -1.75
MTHFD2-201ENST00000394053 TNXBP22105 4242 aa4.12□□□□□ -1.75
MTHFD2-201ENST00000394053 LCE2BO14633 110 aa4.11□□□□□ -1.75
MTHFD2-201ENST00000394053 PKHD1L1Q86WI1 4243 aa4.09□□□□□ -1.75
MTHFD2-201ENST00000394053 MT1BP07438 61 aa4.08□□□□□ -1.76
MTHFD2-201ENST00000394053 KRTAP19-5Q3LI72 72 aa4.06□□□□□ -1.76
MTHFD2-201ENST00000394053 KRTAP10-7P60409 375 aaPredicted RBP4.05□□□□□ -1.76
MTHFD2-201ENST00000394053 KRTAP9-3Q9BYQ3 159 aa4.05□□□□□ -1.76
MTHFD2-201ENST00000394053 MT1XP80297 61 aa4.05□□□□□ -1.76
MTHFD2-201ENST00000394053 KRTAP10-5P60370 271 aa4.01□□□□□ -1.77
MTHFD2-201ENST00000394053 SPRR2FQ96RM1 72 aa4.01□□□□□ -1.77
MTHFD2-201ENST00000394053 MUC17Q685J3 4493 aa4.01□□□□□ -1.77
MTHFD2-201ENST00000394053 FSIP2Q5CZC0 6907 aa4.01□□□□□ -1.77
MTHFD2-201ENST00000394053 UBR4Q5T4S7 5183 aa4□□□□□ -1.77
MTHFD2-201ENST00000394053 RNF213Q63HN8 5207 aa4□□□□□ -1.77
MTHFD2-201ENST00000394053 MUC2Q02817 5179 aa3.95□□□□□ -1.78
MTHFD2-201ENST00000394053 FLGP20930 4061 aaPredicted RBP3.95□□□□□ -1.78
MTHFD2-201ENST00000394053 FAT4Q6V0I7 4981 aa3.94□□□□□ -1.78
MTHFD2-201ENST00000394053 INE1O15225 51 aa3.93□□□□□ -1.78
MTHFD2-201ENST00000394053 LCE2AQ5TA79 106 aaPredicted RBP3.91□□□□□ -1.78
MTHFD2-201ENST00000394053 KRTAP4-8A0A0G2JLE6 195 aa3.91□□□□□ -1.78
MTHFD2-201ENST00000394053 LCE3CQ5T5A8 94 aa3.91□□□□□ -1.78
MTHFD2-201ENST00000394053 KRTAP4-8Q9BYQ9 185 aa3.91□□□□□ -1.78
MTHFD2-201ENST00000394053 HMCN2Q8NDA2 5059 aa3.87□□□□□ -1.79
MTHFD2-201ENST00000394053 KRTAP19-4Q3LI73 84 aa3.8□□□□□ -1.8
MTHFD2-201ENST00000394053 SPRR2EP22531 72 aa3.72□□□□□ -1.81
MTHFD2-201ENST00000394053 SPRR2BP35325 72 aa3.72□□□□□ -1.81
MTHFD2-201ENST00000394053 SPRR2AP35326 72 aa3.72□□□□□ -1.81
MTHFD2-201ENST00000394053 MT1GP13640 62 aa3.68□□□□□ -1.82
MTHFD2-201ENST00000394053 SYNE1Q8NF91 8797 aaKnown RBP3.66□□□□□ -1.82
MTHFD2-201ENST00000394053 KRTAP19-6Q3LI70 58 aa3.65□□□□□ -1.82
MTHFD2-201ENST00000394053 KRTAP9-2Q9BYQ4 174 aa3.64□□□□□ -1.83
MTHFD2-201ENST00000394053 SPRR5A0A1B0GTR4 108 aa3.63□□□□□ -1.83
MTHFD2-201ENST00000394053 KRTAP4-7Q9BYR0 210 aa3.62□□□□□ -1.83
MTHFD2-201ENST00000394053 MT1EP04732 61 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms