RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 TPRXLQ17RH7 258 aa8.16□□□□□ -1.1
PDZD4-202ENST00000393758 M0QZ58 72 aa8.13□□□□□ -1.11
PDZD4-202ENST00000393758 A0A1B0GVY2 172 aa8.11□□□□□ -1.11
PDZD4-202ENST00000393758 R4GN34 69 aa8.11□□□□□ -1.11
PDZD4-202ENST00000393758 PKHD1P08F94 4074 aa8.11□□□□□ -1.11
PDZD4-202ENST00000393758 KRTAP12-2P59991 146 aa8.11□□□□□ -1.11
PDZD4-202ENST00000393758 MYCBP2O75592 4640 aa8.1□□□□□ -1.11
PDZD4-202ENST00000393758 KRTAP3-3Q9BYR6 98 aa8.1□□□□□ -1.11
PDZD4-202ENST00000393758 DYNC1H1Q14204 4646 aaKnown RBP8.09□□□□□ -1.11
PDZD4-202ENST00000393758 KRTAP10-4P60372 401 aaPredicted RBP8.07□□□□□ -1.12
PDZD4-202ENST00000393758 KRTAP3-2Q9BYR7 98 aa8.05□□□□□ -1.12
PDZD4-202ENST00000393758 FAT2Q9NYQ8 4349 aa8.03□□□□□ -1.12
PDZD4-202ENST00000393758 SACSQ9NZJ4 4579 aa7.98□□□□□ -1.13
PDZD4-202ENST00000393758 PKD1P98161 4303 aa7.96□□□□□ -1.14
PDZD4-202ENST00000393758 KRTAP12-1P59990 96 aa7.95□□□□□ -1.14
PDZD4-202ENST00000393758 LRP1Q07954 4544 aaKnown RBP7.94□□□□□ -1.14
PDZD4-202ENST00000393758 CAMK2N1Q7Z7J9 78 aa7.92□□□□□ -1.14
PDZD4-202ENST00000393758 J3QL48 77 aa7.85□□□□□ -1.15
PDZD4-202ENST00000393758 APOBP04114 4563 aaKnown RBP7.83□□□□□ -1.16
PDZD4-202ENST00000393758 KRTAP21-3Q3LHN1 58 aa7.79□□□□□ -1.16
PDZD4-202ENST00000393758 FAT3Q8TDW7 4589 aa7.78□□□□□ -1.16
PDZD4-202ENST00000393758 SEC61BP60468 96 aaKnown RBP7.74□□□□□ -1.17
PDZD4-202ENST00000393758 LUZP6Q538Z0 58 aa7.74□□□□□ -1.17
PDZD4-202ENST00000393758 KRTAP15-1Q3LI76 137 aa7.71□□□□□ -1.18
PDZD4-202ENST00000393758 MT1HL1P0DM35 61 aa7.68□□□□□ -1.18
PDZD4-202ENST00000393758 PLAC4Q8WY50 150 aa7.67□□□□□ -1.18
PDZD4-202ENST00000393758 HSPG2P98160 4391 aa7.67□□□□□ -1.18
PDZD4-202ENST00000393758 KIAA1109Q2LD37 5005 aa7.62□□□□□ -1.19
PDZD4-202ENST00000393758 LRP2P98164 4655 aa7.59□□□□□ -1.19
PDZD4-202ENST00000393758 RYR1P21817 5038 aa7.57□□□□□ -1.2
PDZD4-202ENST00000393758 KMT2CQ8NEZ4 4911 aaKnown RBP7.55□□□□□ -1.2
PDZD4-202ENST00000393758 LORP23490 312 aaPredicted RBP7.54□□□□□ -1.2
PDZD4-202ENST00000393758 PKHD1L1Q86WI1 4243 aa7.53□□□□□ -1.2
PDZD4-202ENST00000393758 KRTAP17-1Q9BYP8 105 aa7.53□□□□□ -1.2
PDZD4-202ENST00000393758 RYR3Q15413 4870 aa7.46□□□□□ -1.21
PDZD4-202ENST00000393758 RYR2Q92736 4967 aa7.46□□□□□ -1.22
PDZD4-202ENST00000393758 KRTAP4-5Q9BYR2 181 aa7.44□□□□□ -1.22
PDZD4-202ENST00000393758 A0A0A0MQY5 61 aa7.42□□□□□ -1.22
PDZD4-202ENST00000393758 LPAP08519 4548 aa7.41□□□□□ -1.22
PDZD4-202ENST00000393758 M0R2T5 61 aa7.4□□□□□ -1.22
PDZD4-202ENST00000393758 TNXBP22105 4242 aa7.36□□□□□ -1.23
PDZD4-202ENST00000393758 TNP1P09430 55 aa7.36□□□□□ -1.23
PDZD4-202ENST00000393758 PP632Q6XCG6 107 aa7.33□□□□□ -1.24
PDZD4-202ENST00000393758 KRTAP4-1Q9BYQ7 146 aa7.27□□□□□ -1.25
PDZD4-202ENST00000393758 ABCA13Q86UQ4 5058 aa7.11□□□□□ -1.27
PDZD4-202ENST00000393758 EPPK1P58107 5090 aaKnown RBP7□□□□□ -1.29
PDZD4-202ENST00000393758 MUC2Q02817 5179 aa6.98□□□□□ -1.29
PDZD4-202ENST00000393758 KRTAP10-10P60014 251 aa6.95□□□□□ -1.3
PDZD4-202ENST00000393758 HERC2O95714 4834 aa6.88□□□□□ -1.31
PDZD4-202ENST00000393758 LCE3AQ5TA76 89 aa6.75□□□□□ -1.33
PDZD4-202ENST00000393758 KRTAP19-2Q3LHN2 52 aa6.71□□□□□ -1.34
PDZD4-202ENST00000393758 MUC17Q685J3 4493 aa6.71□□□□□ -1.34
PDZD4-202ENST00000393758 FAT4Q6V0I7 4981 aa6.67□□□□□ -1.34
PDZD4-202ENST00000393758 KRTAP23-1A1A580 65 aa6.61□□□□□ -1.35
PDZD4-202ENST00000393758 BIRC6Q9NR09 4857 aa6.57□□□□□ -1.36
PDZD4-202ENST00000393758 FLGP20930 4061 aaPredicted RBP6.56□□□□□ -1.36
PDZD4-202ENST00000393758 KRTAP19-1Q8IUB9 90 aa6.54□□□□□ -1.36
PDZD4-202ENST00000393758 SPRR2GQ9BYE4 73 aa6.53□□□□□ -1.36
PDZD4-202ENST00000393758 HERC1Q15751 4861 aa6.53□□□□□ -1.36
PDZD4-202ENST00000393758 RNF213Q63HN8 5207 aa6.5□□□□□ -1.37
PDZD4-202ENST00000393758 MT1FP04733 61 aa6.47□□□□□ -1.37
PDZD4-202ENST00000393758 KRTAP12-3P60328 96 aa6.46□□□□□ -1.38
PDZD4-202ENST00000393758 KRTAP10-12P60413 245 aa6.46□□□□□ -1.38
PDZD4-202ENST00000393758 MT1HP80294 61 aa6.46□□□□□ -1.38
PDZD4-202ENST00000393758 MT2AP02795 61 aa6.44□□□□□ -1.38
PDZD4-202ENST00000393758 PCLOQ9Y6V0 5065 aa6.44□□□□□ -1.38
PDZD4-202ENST00000393758 SPRR5A0A1B0GTR4 108 aa6.43□□□□□ -1.38
PDZD4-202ENST00000393758 LCE2CQ5TA81 110 aa6.41□□□□□ -1.38
PDZD4-202ENST00000393758 PRO2289Q9P1D8 64 aa6.36□□□□□ -1.39
PDZD4-202ENST00000393758 KRTAP8-1Q8IUC2 63 aa6.29□□□□□ -1.4
PDZD4-202ENST00000393758 HMCN2Q8NDA2 5059 aa6.28□□□□□ -1.4
PDZD4-202ENST00000393758 UBR4Q5T4S7 5183 aa6.26□□□□□ -1.41
PDZD4-202ENST00000393758 INE1O15225 51 aa6.22□□□□□ -1.41
PDZD4-202ENST00000393758 KRTAP10-7P60409 375 aaPredicted RBP6.21□□□□□ -1.41
PDZD4-202ENST00000393758 KRTAP9-8Q9BYQ0 159 aa6.2□□□□□ -1.42
PDZD4-202ENST00000393758 MT1XP80297 61 aa6.2□□□□□ -1.42
PDZD4-202ENST00000393758 KRTAP10-5P60370 271 aa6.19□□□□□ -1.42
PDZD4-202ENST00000393758 MT1BP07438 61 aa6.17□□□□□ -1.42
PDZD4-202ENST00000393758 KRTAP19-8Q3LI54 63 aa6.13□□□□□ -1.43
PDZD4-202ENST00000393758 KRTAP19-5Q3LI72 72 aa6.06□□□□□ -1.44
PDZD4-202ENST00000393758 LCE3CQ5T5A8 94 aa5.93□□□□□ -1.46
PDZD4-202ENST00000393758 KRTAP4-8A0A0G2JLE6 195 aa5.92□□□□□ -1.46
PDZD4-202ENST00000393758 KRTAP9-3Q9BYQ3 159 aa5.92□□□□□ -1.46
PDZD4-202ENST00000393758 KRTAP4-8Q9BYQ9 185 aa5.92□□□□□ -1.46
PDZD4-202ENST00000393758 USH2AO75445 5202 aa5.92□□□□□ -1.46
PDZD4-202ENST00000393758 KMT2DO14686 5537 aa5.91□□□□□ -1.46
PDZD4-202ENST00000393758 CRCT1Q9UGL9 99 aa5.8□□□□□ -1.48
PDZD4-202ENST00000393758 KRTAP4-7Q9BYR0 210 aa5.79□□□□□ -1.48
PDZD4-202ENST00000393758 FSIP2Q5CZC0 6907 aa5.77□□□□□ -1.49
PDZD4-202ENST00000393758 LCE2BO14633 110 aa5.76□□□□□ -1.49
PDZD4-202ENST00000393758 KRTAP9-6A8MVA2 160 aa5.6□□□□□ -1.51
PDZD4-202ENST00000393758 KRTAP19-7Q3SYF9 63 aa5.46□□□□□ -1.53
PDZD4-202ENST00000393758 DSTQ03001 7570 aaKnown RBP5.42□□□□□ -1.54
PDZD4-202ENST00000393758 MT1LQ93083 61 aa5.41□□□□□ -1.54
PDZD4-202ENST00000393758 MT1GP13640 62 aa5.39□□□□□ -1.55
PDZD4-202ENST00000393758 SYNE1Q8NF91 8797 aaKnown RBP5.38□□□□□ -1.55
PDZD4-202ENST00000393758 LOC100996750A0A140TA64 210 aa5.37□□□□□ -1.55
PDZD4-202ENST00000393758 FCGBPQ9Y6R7 5405 aaPredicted RBP5.36□□□□□ -1.55
PDZD4-202ENST00000393758 MT1EP04732 61 aa5.36□□□□□ -1.55
PDZD4-202ENST00000393758 KRTAP4-3Q9BYR4 195 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms