RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 LRP1Q07954 4544 aaKnown RBP8.47□□□□□ -1.05
PHTF1-205ENST00000393357 KRTAP10-6P60371 365 aaPredicted RBP8.45□□□□□ -1.06
PHTF1-205ENST00000393357 KRTAP10-8P60410 259 aa8.44□□□□□ -1.06
PHTF1-205ENST00000393357 KRTAP12-2P59991 146 aa8.38□□□□□ -1.07
PHTF1-205ENST00000393357 S4R3F8 94 aa8.37□□□□□ -1.07
PHTF1-205ENST00000393357 KRTAP3-3Q9BYR6 98 aa8.37□□□□□ -1.07
PHTF1-205ENST00000393357 HSPG2P98160 4391 aa8.36□□□□□ -1.07
PHTF1-205ENST00000393357 SACSQ9NZJ4 4579 aa8.35□□□□□ -1.07
PHTF1-205ENST00000393357 FAT3Q8TDW7 4589 aa8.34□□□□□ -1.07
PHTF1-205ENST00000393357 APOBP04114 4563 aaKnown RBP8.32□□□□□ -1.08
PHTF1-205ENST00000393357 KRTAP3-2Q9BYR7 98 aa8.31□□□□□ -1.08
PHTF1-205ENST00000393357 RPS29P62273 56 aaKnown RBP8.27□□□□□ -1.08
PHTF1-205ENST00000393357 LPAP08519 4548 aa8.25□□□□□ -1.09
PHTF1-205ENST00000393357 KRTAP21-3Q3LHN1 58 aa8.19□□□□□ -1.1
PHTF1-205ENST00000393357 KRTAP15-1Q3LI76 137 aa8.16□□□□□ -1.1
PHTF1-205ENST00000393357 KRTAP12-1P59990 96 aa8.15□□□□□ -1.11
PHTF1-205ENST00000393357 XP32Q5T750 250 aa8.14□□□□□ -1.11
PHTF1-205ENST00000393357 PKHD1L1Q86WI1 4243 aa8.13□□□□□ -1.11
PHTF1-205ENST00000393357 KRTAP10-4P60372 401 aaPredicted RBP8.11□□□□□ -1.11
PHTF1-205ENST00000393357 LRP2P98164 4655 aa8.1□□□□□ -1.11
PHTF1-205ENST00000393357 KMT2CQ8NEZ4 4911 aaKnown RBP8.1□□□□□ -1.11
PHTF1-205ENST00000393357 M0QZ58 72 aa8.06□□□□□ -1.12
PHTF1-205ENST00000393357 Q5VSD8 79 aa8.01□□□□□ -1.13
PHTF1-205ENST00000393357 A0A1B0GVY2 172 aa8.01□□□□□ -1.13
PHTF1-205ENST00000393357 R4GN34 69 aa7.97□□□□□ -1.13
PHTF1-205ENST00000393357 RYR1P21817 5038 aa7.93□□□□□ -1.14
PHTF1-205ENST00000393357 KIAA1109Q2LD37 5005 aa7.89□□□□□ -1.15
PHTF1-205ENST00000393357 TNXBP22105 4242 aa7.86□□□□□ -1.15
PHTF1-205ENST00000393357 RYR2Q92736 4967 aa7.85□□□□□ -1.15
PHTF1-205ENST00000393357 LORP23490 312 aaPredicted RBP7.83□□□□□ -1.16
PHTF1-205ENST00000393357 PLAC4Q8WY50 150 aa7.82□□□□□ -1.16
PHTF1-205ENST00000393357 KRTAP17-1Q9BYP8 105 aa7.8□□□□□ -1.16
PHTF1-205ENST00000393357 CAMK2N1Q7Z7J9 78 aa7.74□□□□□ -1.17
PHTF1-205ENST00000393357 LUZP6Q538Z0 58 aa7.73□□□□□ -1.17
PHTF1-205ENST00000393357 RYR3Q15413 4870 aa7.73□□□□□ -1.17
PHTF1-205ENST00000393357 A0A0A0MQY5 61 aa7.72□□□□□ -1.17
PHTF1-205ENST00000393357 ABCA13Q86UQ4 5058 aa7.71□□□□□ -1.18
PHTF1-205ENST00000393357 MUC2Q02817 5179 aa7.69□□□□□ -1.18
PHTF1-205ENST00000393357 MT1HL1P0DM35 61 aa7.61□□□□□ -1.19
PHTF1-205ENST00000393357 EPPK1P58107 5090 aaKnown RBP7.6□□□□□ -1.19
PHTF1-205ENST00000393357 KRTAP4-5Q9BYR2 181 aa7.43□□□□□ -1.22
PHTF1-205ENST00000393357 KRTAP4-1Q9BYQ7 146 aa7.41□□□□□ -1.22
PHTF1-205ENST00000393357 SEC61BP60468 96 aaKnown RBP7.3□□□□□ -1.24
PHTF1-205ENST00000393357 J3QL48 77 aa7.28□□□□□ -1.24
PHTF1-205ENST00000393357 FAT4Q6V0I7 4981 aa7.26□□□□□ -1.25
PHTF1-205ENST00000393357 TNP1P09430 55 aa7.22□□□□□ -1.25
PHTF1-205ENST00000393357 PP632Q6XCG6 107 aa7.2□□□□□ -1.26
PHTF1-205ENST00000393357 MUC17Q685J3 4493 aa7.2□□□□□ -1.26
PHTF1-205ENST00000393357 PCLOQ9Y6V0 5065 aa7.11□□□□□ -1.27
PHTF1-205ENST00000393357 HERC2O95714 4834 aa7.04□□□□□ -1.28
PHTF1-205ENST00000393357 M0R2T5 61 aa7.01□□□□□ -1.29
PHTF1-205ENST00000393357 RNF213Q63HN8 5207 aa6.99□□□□□ -1.29
PHTF1-205ENST00000393357 HERC1Q15751 4861 aa6.94□□□□□ -1.3
PHTF1-205ENST00000393357 KRTAP19-2Q3LHN2 52 aa6.92□□□□□ -1.3
PHTF1-205ENST00000393357 HMCN2Q8NDA2 5059 aa6.9□□□□□ -1.31
PHTF1-205ENST00000393357 LCE3AQ5TA76 89 aa6.88□□□□□ -1.31
PHTF1-205ENST00000393357 FLGP20930 4061 aaPredicted RBP6.82□□□□□ -1.32
PHTF1-205ENST00000393357 SPRR5A0A1B0GTR4 108 aa6.72□□□□□ -1.33
PHTF1-205ENST00000393357 KRTAP10-10P60014 251 aa6.72□□□□□ -1.33
PHTF1-205ENST00000393357 BIRC6Q9NR09 4857 aa6.66□□□□□ -1.34
PHTF1-205ENST00000393357 KRTAP19-1Q8IUB9 90 aa6.64□□□□□ -1.35
PHTF1-205ENST00000393357 UBR4Q5T4S7 5183 aa6.64□□□□□ -1.35
PHTF1-205ENST00000393357 KMT2DO14686 5537 aa6.54□□□□□ -1.36
PHTF1-205ENST00000393357 KRTAP23-1A1A580 65 aa6.52□□□□□ -1.37
PHTF1-205ENST00000393357 PRO2289Q9P1D8 64 aa6.52□□□□□ -1.37
PHTF1-205ENST00000393357 SPRR2GQ9BYE4 73 aa6.5□□□□□ -1.37
PHTF1-205ENST00000393357 MT1FP04733 61 aa6.49□□□□□ -1.37
PHTF1-205ENST00000393357 USH2AO75445 5202 aa6.49□□□□□ -1.37
PHTF1-205ENST00000393357 LCE2CQ5TA81 110 aa6.48□□□□□ -1.37
PHTF1-205ENST00000393357 KRTAP12-3P60328 96 aa6.46□□□□□ -1.38
PHTF1-205ENST00000393357 MT2AP02795 61 aa6.4□□□□□ -1.38
PHTF1-205ENST00000393357 KRTAP10-12P60413 245 aa6.39□□□□□ -1.39
PHTF1-205ENST00000393357 MT1HP80294 61 aa6.38□□□□□ -1.39
PHTF1-205ENST00000393357 KRTAP10-7P60409 375 aaPredicted RBP6.36□□□□□ -1.39
PHTF1-205ENST00000393357 KRTAP8-1Q8IUC2 63 aa6.34□□□□□ -1.39
PHTF1-205ENST00000393357 KRTAP10-5P60370 271 aa6.3□□□□□ -1.4
PHTF1-205ENST00000393357 MT1XP80297 61 aa6.29□□□□□ -1.4
PHTF1-205ENST00000393357 INE1O15225 51 aa6.29□□□□□ -1.4
PHTF1-205ENST00000393357 MT1BP07438 61 aa6.23□□□□□ -1.41
PHTF1-205ENST00000393357 KRTAP9-8Q9BYQ0 159 aa6.22□□□□□ -1.41
PHTF1-205ENST00000393357 FSIP2Q5CZC0 6907 aa6.13□□□□□ -1.43
PHTF1-205ENST00000393357 KRTAP19-5Q3LI72 72 aa6.13□□□□□ -1.43
PHTF1-205ENST00000393357 KRTAP4-8A0A0G2JLE6 195 aa6.08□□□□□ -1.44
PHTF1-205ENST00000393357 KRTAP4-8Q9BYQ9 185 aa6.08□□□□□ -1.44
PHTF1-205ENST00000393357 KRTAP4-7Q9BYR0 210 aa6.08□□□□□ -1.44
PHTF1-205ENST00000393357 KRTAP19-8Q3LI54 63 aa6.06□□□□□ -1.44
PHTF1-205ENST00000393357 LCE3CQ5T5A8 94 aa5.99□□□□□ -1.45
PHTF1-205ENST00000393357 KRTAP9-6A8MVA2 160 aa5.96□□□□□ -1.46
PHTF1-205ENST00000393357 DSTQ03001 7570 aaKnown RBP5.9□□□□□ -1.47
PHTF1-205ENST00000393357 KRTAP9-3Q9BYQ3 159 aa5.89□□□□□ -1.47
PHTF1-205ENST00000393357 OBSCNQ5VST9 7968 aa5.83□□□□□ -1.48
PHTF1-205ENST00000393357 CRCT1Q9UGL9 99 aa5.8□□□□□ -1.48
PHTF1-205ENST00000393357 LCE2BO14633 110 aa5.79□□□□□ -1.48
PHTF1-205ENST00000393357 FCGBPQ9Y6R7 5405 aaPredicted RBP5.78□□□□□ -1.48
PHTF1-205ENST00000393357 SYNE1Q8NF91 8797 aaKnown RBP5.77□□□□□ -1.49
PHTF1-205ENST00000393357 LOC100996750A0A140TA64 210 aa5.63□□□□□ -1.51
PHTF1-205ENST00000393357 MUC12Q9UKN1 5478 aa5.61□□□□□ -1.51
PHTF1-205ENST00000393357 KRTAP19-7Q3SYF9 63 aa5.58□□□□□ -1.52
PHTF1-205ENST00000393357 KRTAP4-3Q9BYR4 195 aa5.58□□□□□ -1.52
PHTF1-205ENST00000393357 LCE2AQ5TA79 106 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms